RNA–Protein interactions for RNA: YOR329C

SCD5, Transcript of Protein required for normal actin organization and endocytosis, yeastyeast

Gene SCD5, Length 2,619 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD5YOR329C NUP49Q02199 472 aa2.17□□□□□ -2.06
SCD5YOR329C YMR099CQ03161 297 aaKnown RBP2.17□□□□□ -2.06
SCD5YOR329C RSM10Q03201 203 aa2.17□□□□□ -2.06
SCD5YOR329C YMR315WQ04869 349 aaKnown RBP2.17□□□□□ -2.06
SCD5YOR329C DCR2Q05924 578 aa2.17□□□□□ -2.06
SCD5YOR329C YLR456WQ06199 204 aa2.17□□□□□ -2.06
SCD5YOR329C MCM21Q06675 368 aa2.17□□□□□ -2.06
SCD5YOR329C BRX1Q08235 291 aaKnown RBP2.17□□□□□ -2.06
SCD5YOR329C YOR389WQ08912 624 aa2.17□□□□□ -2.06
SCD5YOR329C THP3Q12049 470 aaKnown RBP2.17□□□□□ -2.06
SCD5YOR329C YGK3Q12222 375 aaPredicted RBP2.17□□□□□ -2.06
SCD5YOR329C RBD2Q12270 262 aa2.17□□□□□ -2.06
SCD5YOR329C DCP1Q12517 231 aaPredicted RBP2.17□□□□□ -2.06
SCD5YOR329C PEP4P07267 405 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C ENA1P13587 1091 aa2.16□□□□□ -2.06
SCD5YOR329C PRE7P23724 241 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C FPS1P23900 669 aa2.16□□□□□ -2.06
SCD5YOR329C CWP1P28319 239 aa2.16□□□□□ -2.06
SCD5YOR329C RPN2P32565 945 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C PUB1P32588 453 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SCD5YOR329C LHP1P33399 275 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C PLB1P39105 664 aa2.16□□□□□ -2.06
SCD5YOR329C PCL6P40038 420 aa2.16□□□□□ -2.06
SCD5YOR329C SWM2P40342 146 aa2.16□□□□□ -2.06
SCD5YOR329C ARF3P40994 183 aaRIP-Chip data2.16□□□□□ -2.06not detected
SCD5YOR329C RPL10P41805 221 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C PFS2P42841 465 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C RPE1P46969 238 aa2.16□□□□□ -2.06
SCD5YOR329C CCC1P47818 322 aa2.16□□□□□ -2.06
SCD5YOR329C IMD3P50095 523 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C SLI1P53304 468 aa2.16□□□□□ -2.06
SCD5YOR329C MTM1P53320 366 aa2.16□□□□□ -2.06
SCD5YOR329C GIM3P53900 129 aa2.16□□□□□ -2.06
SCD5YOR329C NAM8Q00539 523 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C ENA2Q01896 1091 aa2.16□□□□□ -2.06
SCD5YOR329C YDR249CQ03787 373 aa2.16□□□□□ -2.06
SCD5YOR329C FIN1Q03898 291 aa2.16□□□□□ -2.06
SCD5YOR329C RVB1Q03940 463 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C MRPL1Q04599 285 aa2.16□□□□□ -2.06
SCD5YOR329C CYK3Q07533 885 aa2.16□□□□□ -2.06
SCD5YOR329C COQ10Q08058 207 aa2.16□□□□□ -2.06
SCD5YOR329C NTG2Q08214 380 aa2.16□□□□□ -2.06
SCD5YOR329C NBA1Q08229 501 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C BSC6Q08280 497 aa2.16□□□□□ -2.06
SCD5YOR329C MMT2Q08970 484 aa2.16□□□□□ -2.06
SCD5YOR329C YDL109CQ12103 647 aa2.16□□□□□ -2.06
SCD5YOR329C BAG7Q12128 409 aa2.16□□□□□ -2.06
SCD5YOR329C RTN2Q12443 393 aa2.16□□□□□ -2.06
SCD5YOR329C ENA5Q12691 1091 aa2.16□□□□□ -2.06
SCD5YOR329C YGR161W-CQ3E744 92 aa2.16□□□□□ -2.06
SCD5YOR329C YBL113CQ7M4S9 792 aa2.16□□□□□ -2.06
SCD5YOR329C BEM2P39960 2167 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C CAR2P07991 424 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C RIP1P08067 215 aa2.16□□□□□ -2.06
SCD5YOR329C YOL162WP0CF19 215 aa2.16□□□□□ -2.06
SCD5YOR329C CAP2P13517 287 aa2.16□□□□□ -2.06
SCD5YOR329C STE12P13574 688 aa2.16□□□□□ -2.06
SCD5YOR329C YAP1P19880 650 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C AIM17P23180 465 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C RNQ1P25367 405 aa2.16□□□□□ -2.06
SCD5YOR329C IDH2P28241 369 aaKnown RBP2.16□□□□□ -2.06
SCD5YOR329C ITR1P30605 584 aa2.16□□□□□ -2.06
SCD5YOR329C DOA4P32571 926 aa2.16□□□□□ -2.06
SCD5YOR329C SAM37P50110 327 aa2.16□□□□□ -2.06
SCD5YOR329C YGR266WP53326 701 aa2.16□□□□□ -2.06
SCD5YOR329C MKC7P53379 596 aa2.16□□□□□ -2.06
SCD5YOR329C COS1P53822 381 aa2.16□□□□□ -2.06
SCD5YOR329C MTQ1P53944 314 aa2.16□□□□□ -2.06
SCD5YOR329C YKR005CQ02203 525 aa2.16□□□□□ -2.06
SCD5YOR329C REC102Q02721 264 aa2.16□□□□□ -2.06
SCD5YOR329C YPL068CQ02749 293 aa2.16□□□□□ -2.06
SCD5YOR329C NCE101Q02820 53 aa2.16□□□□□ -2.06
SCD5YOR329C ELP6Q04868 273 aa2.16□□□□□ -2.06
SCD5YOR329C STP3Q05937 343 aa2.16□□□□□ -2.06
SCD5YOR329C BUR2Q05949 395 aa2.16□□□□□ -2.06
SCD5YOR329C VPS36Q06696 566 aa2.16□□□□□ -2.06
SCD5YOR329C YPL191CQ08930 360 aa2.16□□□□□ -2.06
SCD5YOR329C GRE1Q08969 168 aa2.16□□□□□ -2.06
SCD5YOR329C MCP1Q12106 302 aa2.16□□□□□ -2.06
SCD5YOR329C FRE6Q12473 712 aa2.16□□□□□ -2.06
SCD5YOR329C SKS1Q12505 502 aa2.16□□□□□ -2.06
SCD5YOR329C PDE2P06776 526 aa2.15□□□□□ -2.06
SCD5YOR329C SPS4P09937 338 aa2.15□□□□□ -2.06
SCD5YOR329C CDC34P14682 295 aa2.15□□□□□ -2.06
SCD5YOR329C CHA1P25379 360 aaKnown RBP2.15□□□□□ -2.06
SCD5YOR329C PTC6P25646 442 aa2.15□□□□□ -2.06
SCD5YOR329C FUN19P28003 413 aaPredicted RBP2.15□□□□□ -2.06
SCD5YOR329C EHD3P28817 500 aa2.15□□□□□ -2.06
SCD5YOR329C HBS1P32769 611 aaKnown RBP2.15□□□□□ -2.06
SCD5YOR329C RSM22P36056 628 aa2.15□□□□□ -2.06
SCD5YOR329C SHE2P36068 246 aaKnown RBP RIP-Chip data2.15□□□□□ -2.06not detected
SCD5YOR329C APD1P38281 316 aa2.15□□□□□ -2.06
SCD5YOR329C HRB1P38922 454 aaKnown RBP RIP-Chip data2.15□□□□□ -2.06not detected
SCD5YOR329C FET3P38993 636 aa2.15□□□□□ -2.06
SCD5YOR329C LSM1P47017 172 aaKnown RBP2.15□□□□□ -2.06
SCD5YOR329C EFM3P47163 339 aa2.15□□□□□ -2.06
SCD5YOR329C YJR141WP47172 347 aaPredicted RBP2.15□□□□□ -2.06
SCD5YOR329C TPN1P53099 579 aa2.15□□□□□ -2.06
SCD5YOR329C PAU12P53343 120 aa2.15□□□□□ -2.06
SCD5YOR329C OGG1P53397 376 aaPredicted RBP2.15□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 75 ms