RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	FAA2	P39518	744 aa		4.26	□□□□□ -1.73
ATM1	YMR301C	SOK1	P40317	901 aa		4.26	□□□□□ -1.73
ATM1	YMR301C	GAB1	P41733	394 aa		4.26	□□□□□ -1.73
ATM1	YMR301C	RBG2	P53295	368 aa	Known RBP	4.26	□□□□□ -1.73
ATM1	YMR301C	RNT1	Q02555	471 aa		4.26	□□□□□ -1.73
ATM1	YMR301C	RPM2	Q02773	1202 aa		4.26	□□□□□ -1.73
ATM1	YMR301C	NCE101	Q02820	53 aa		4.26	□□□□□ -1.73
ATM1	YMR301C	ORM2	Q06144	216 aa		4.26	□□□□□ -1.73
ATM1	YMR301C	SCM3	Q12334	223 aa		4.26	□□□□□ -1.73
ATM1	YMR301C	CDC39	P25655	2108 aa	Known RBP	4.25	□□□□□ -1.73
ATM1	YMR301C	GPH1	P06738	902 aa	Known RBP	4.25	□□□□□ -1.73
ATM1	YMR301C	RAP1	P11938	827 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	CCA1	P21269	546 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	CWH43	P25618	953 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	TUL1	P36096	758 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	RGI1	P40043	161 aa	Predicted RBP	4.25	□□□□□ -1.73
ATM1	YMR301C	YNL208W	P40159	199 aa	Known RBP	4.25	□□□□□ -1.73
ATM1	YMR301C	YJL068C	P40363	299 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	IRC5	P43610	853 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	BIT61	P47041	543 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	AAD10	P47182	288 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	NCE103	P53615	221 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	ARC35	P53731	342 aa	Known RBP	4.25	□□□□□ -1.73
ATM1	YMR301C	SWP1	Q02795	286 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	PLM2	Q04383	521 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	RCN2	Q12044	265 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	HER1	Q12276	1246 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	RPC40	P07703	335 aa	Known RBP	4.25	□□□□□ -1.73
ATM1	YMR301C	CTA1	P15202	515 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	PHO91	P27514	894 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	APD1	P38281	316 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	SWD1	P39706	426 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	YIL166C	P40445	542 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	MNN5	P46982	586 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	PRY1	P47032	299 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	LGE1	Q02796	332 aa	Known RBP	4.25	□□□□□ -1.73
ATM1	YMR301C	PLB2	Q03674	706 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	DCR2	Q05924	578 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	RPN6	Q12377	434 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	YPT6	Q99260	215 aa		4.25	□□□□□ -1.73
ATM1	YMR301C	YHR214C-D	P0CX93	97 aa		4.24	□□□□□ -1.73
ATM1	YMR301C	STE12	P13574	688 aa		4.24	□□□□□ -1.73
ATM1	YMR301C	YPT7	P32939	208 aa		4.24	□□□□□ -1.73
ATM1	YMR301C	YOR062C	P36025	268 aa		4.24	□□□□□ -1.73
ATM1	YMR301C	XBP1	P40489	647 aa		4.24	□□□□□ -1.73
ATM1	YMR301C	REE1	P40893	198 aa		4.24	□□□□□ -1.73
ATM1	YMR301C	YFR054C	P43622	192 aa		4.24	□□□□□ -1.73
ATM1	YMR301C	RAD30	Q04049	632 aa		4.24	□□□□□ -1.73
ATM1	YMR301C	ERB1	Q04660	807 aa	Known RBP	4.24	□□□□□ -1.73
ATM1	YMR301C	NAT4	Q04751	285 aa		4.24	□□□□□ -1.73
ATM1	YMR301C	ARR2	Q06597	130 aa		4.24	□□□□□ -1.73
ATM1	YMR301C	RDR1	Q08904	546 aa		4.24	□□□□□ -1.73
ATM1	YMR301C	ARG3	P05150	338 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	ZWF1	P11412	505 aa	Known RBP	4.23	□□□□□ -1.73
ATM1	YMR301C	EXO70	P19658	623 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	CLB4	P24871	460 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	CTR86	P25355	563 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	SIP2	P34164	415 aa	Known RBP	4.23	□□□□□ -1.73
ATM1	YMR301C	TOD6	P34219	525 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	NSG1	P38837	291 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	YEL068C	P39977	110 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	VHR1	P40522	640 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	MRPL19	P53875	158 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	SDC1	Q03323	175 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	YDR476C	Q03362	224 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	ATG38	Q05789	226 aa	Known RBP	4.23	□□□□□ -1.73
ATM1	YMR301C	DBP9	Q06218	594 aa	Known RBP	4.23	□□□□□ -1.73
ATM1	YMR301C	DCI1	Q08558	271 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	NPC2	Q12408	173 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	SPS100	P13130	326 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	CBS1	P14066	229 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	YAP1	P19880	650 aa	Known RBP	4.23	□□□□□ -1.73
ATM1	YMR301C	PBN1	P25580	416 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	DAL80	P26343	269 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	RAD14	P28519	371 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	MRE11	P32829	692 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	LHP1	P33399	275 aa	Known RBP	4.23	□□□□□ -1.73
ATM1	YMR301C	YLF2	P38746	405 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	RTT105	P40063	208 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	LSM4	P40070	187 aa	Known RBP	4.23	□□□□□ -1.73
ATM1	YMR301C	PUG1	P40100	303 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	MKC7	P53379	596 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	SNZ1	Q03148	297 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	YML119W	Q03208	357 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	CTL1	Q03220	320 aa	Known RBP	4.23	□□□□□ -1.73
ATM1	YMR301C	BRE4	Q07660	1125 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	COS7	Q07788	383 aa		4.23	□□□□□ -1.73
ATM1	YMR301C	GPN2	Q08726	347 aa	Predicted RBP	4.23	□□□□□ -1.73
ATM1	YMR301C	FMP40	Q08968	688 aa	Predicted RBP	4.23	□□□□□ -1.73
ATM1	YMR301C	KSS1	P14681	368 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	THR1	P17423	357 aa	Known RBP	4.22	□□□□□ -1.73
ATM1	YMR301C	DMC1	P25453	334 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	RPD3	P32561	433 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	LOT5	P34234	306 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	ZTA1	P38230	334 aa	Known RBP	4.22	□□□□□ -1.73
ATM1	YMR301C	ECM34	P38728	170 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	PTH1	P38876	190 aa	Known RBP	4.22	□□□□□ -1.73
ATM1	YMR301C	YJL193W	P39542	402 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	YER010C	P40011	234 aa		4.22	□□□□□ -1.73
ATM1	YMR301C	ZRG8	P40021	1076 aa		4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms