RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C CUP2P15315 225 aa0.78□□□□□ -2.29
RKR1YMR247C ALG1P16661 449 aa0.78□□□□□ -2.29
RKR1YMR247C HPR1P17629 752 aaKnown RBP0.78□□□□□ -2.29
RKR1YMR247C AAC3P18238 307 aa0.78□□□□□ -2.29
RKR1YMR247C MSK1P32048 576 aa0.78□□□□□ -2.29
RKR1YMR247C RME1P32338 300 aaKnown RBP0.78□□□□□ -2.29
RKR1YMR247C YOX1P34161 385 aa0.78□□□□□ -2.29
RKR1YMR247C YKL071WP36086 256 aa0.78□□□□□ -2.29
RKR1YMR247C SHE1P38200 338 aa0.78□□□□□ -2.29
RKR1YMR247C GGC1P38988 300 aa0.78□□□□□ -2.29
RKR1YMR247C INA22P40576 216 aa0.78□□□□□ -2.29
RKR1YMR247C LCL3P53153 274 aa0.78□□□□□ -2.29
RKR1YMR247C COG7P53195 279 aa0.78□□□□□ -2.29
RKR1YMR247C SWC4P53201 476 aa0.78□□□□□ -2.29
RKR1YMR247C SLT2Q00772 484 aa0.78□□□□□ -2.29
RKR1YMR247C YLL007CQ07799 665 aa0.78□□□□□ -2.29
RKR1YMR247C LDS2Q08218 356 aa0.78□□□□□ -2.29
RKR1YMR247C IES4Q08561 116 aa0.78□□□□□ -2.29
RKR1YMR247C TRM10Q12400 293 aa0.78□□□□□ -2.29
RKR1YMR247C NAG1Q8TGN9 163 aa0.78□□□□□ -2.29
RKR1YMR247C IZH4Q99393 312 aa0.78□□□□□ -2.29
RKR1YMR247C COX4P04037 155 aa0.77□□□□□ -2.29
RKR1YMR247C ZWF1P11412 505 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C GCD2P12754 651 aaPredicted RBP0.77□□□□□ -2.29
RKR1YMR247C CLN3P13365 580 aa0.77□□□□□ -2.29
RKR1YMR247C RSA4P25382 515 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C VMA5P31412 392 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C MDL1P33310 695 aa0.77□□□□□ -2.29
RKR1YMR247C SPO23P33757 523 aa0.77□□□□□ -2.29
RKR1YMR247C AIM29P36154 155 aa0.77□□□□□ -2.29
RKR1YMR247C RTC2P38279 296 aa0.77□□□□□ -2.29
RKR1YMR247C APE4P38821 490 aa0.77□□□□□ -2.29
RKR1YMR247C ANS1P38832 159 aa0.77□□□□□ -2.29
RKR1YMR247C KEG1P43614 200 aa0.77□□□□□ -2.29
RKR1YMR247C BIR1P47134 954 aa0.77□□□□□ -2.29
RKR1YMR247C YGR250CP53316 781 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C MSC3Q05812 728 aa0.77□□□□□ -2.29
RKR1YMR247C RBD2Q12270 262 aa0.77□□□□□ -2.29
RKR1YMR247C RAX2Q12465 1220 aa0.77□□□□□ -2.29
RKR1YMR247C SFG1Q12507 346 aa0.77□□□□□ -2.29
RKR1YMR247C AFI1Q99222 893 aa0.77□□□□□ -2.29
RKR1YMR247C YOR338WQ99326 363 aa0.77□□□□□ -2.29
RKR1YMR247C CAT8P39113 1433 aa0.77□□□□□ -2.29
RKR1YMR247C RPL42AP0CX27 106 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C RPL42BP0CX28 106 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C KRR1P25586 316 aaPredicted RBP0.77□□□□□ -2.29
RKR1YMR247C SKI2P35207 1287 aaKnown RBP RIP-Chip data0.77□□□□□ -2.29not detected
RKR1YMR247C YKL063CP35725 167 aa0.77□□□□□ -2.29
RKR1YMR247C OPY1P38271 328 aa0.77□□□□□ -2.29
RKR1YMR247C VPS52P39904 641 aa0.77□□□□□ -2.29
RKR1YMR247C SPO73P40031 143 aa0.77□□□□□ -2.29
RKR1YMR247C SEC28P40509 296 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C OST1P41543 476 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C GCD10P41814 478 aa0.77□□□□□ -2.29
RKR1YMR247C ZIM17P42844 174 aa0.77□□□□□ -2.29
RKR1YMR247C YJR085CP47131 105 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C GTO1P48239 356 aa0.77□□□□□ -2.29
RKR1YMR247C PCP1P53259 346 aa0.77□□□□□ -2.29
RKR1YMR247C OAZ1Q02803 292 aa0.77□□□□□ -2.29
RKR1YMR247C RVB1Q03940 463 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C GAS2Q06135 555 aa0.77□□□□□ -2.29
RKR1YMR247C MMR1Q06324 491 aa0.77□□□□□ -2.29
RKR1YMR247C YLR012CQ07927 99 aa0.77□□□□□ -2.29
RKR1YMR247C IZH2Q12442 317 aa0.77□□□□□ -2.29
RKR1YMR247C PGA3Q12746 312 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C MOT1P32333 1867 aa0.77□□□□□ -2.29
RKR1YMR247C YRF1-4O13559 1382 aa0.77□□□□□ -2.29
RKR1YMR247C HEM2P05373 342 aa0.77□□□□□ -2.29
RKR1YMR247C MAS1P10507 462 aa0.77□□□□□ -2.29
RKR1YMR247C KGD1P20967 1014 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C VPS1P21576 704 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C NAM9P27929 486 aa0.77□□□□□ -2.29
RKR1YMR247C FAA1P30624 700 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C SWI3P32591 825 aa0.77□□□□□ -2.29
RKR1YMR247C TOA2P32774 122 aa0.77□□□□□ -2.29
RKR1YMR247C MUD2P36084 527 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C THI2P38141 450 aa0.77□□□□□ -2.29
RKR1YMR247C PFF1P38244 976 aa0.77□□□□□ -2.29
RKR1YMR247C IST2P38250 946 aa0.77□□□□□ -2.29
RKR1YMR247C KEL1P38853 1164 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C SMC2P38989 1170 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C CRH1P53301 507 aa0.77□□□□□ -2.29
RKR1YMR247C DBP6P53734 629 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C AQR1P53943 586 aa0.77□□□□□ -2.29
RKR1YMR247C TRM44Q02648 567 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C TSA2Q04120 196 aa0.77□□□□□ -2.29
RKR1YMR247C ROY1Q04847 553 aa0.77□□□□□ -2.29
RKR1YMR247C FSH2Q05015 223 aa0.77□□□□□ -2.29
RKR1YMR247C MDM30Q05930 598 aa0.77□□□□□ -2.29
RKR1YMR247C YDL109CQ12103 647 aa0.77□□□□□ -2.29
RKR1YMR247C PFK27Q12471 397 aaPredicted RBP0.77□□□□□ -2.29
RKR1YMR247C SNF8Q12483 233 aa0.77□□□□□ -2.29
RKR1YMR247C DRS2P39524 1355 aa0.77□□□□□ -2.29
RKR1YMR247C ILV5P06168 395 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C MET8P15807 274 aa0.77□□□□□ -2.29
RKR1YMR247C IME2P32581 645 aa0.77□□□□□ -2.29
RKR1YMR247C SAS3P34218 831 aa0.77□□□□□ -2.29
RKR1YMR247C KTI12P34253 313 aaKnown RBP0.77□□□□□ -2.29
RKR1YMR247C SBE22P38814 852 aa0.77□□□□□ -2.29
RKR1YMR247C YER079WP40052 210 aaKnown RBP0.77□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms