RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTF18	YMR078C	RPN6	Q12377	434 aa		4.11	□□□□□ -1.75
CTF18	YMR078C	ZRC1	P20107	442 aa		4.1	□□□□□ -1.75
CTF18	YMR078C	RRF1	P38771	230 aa		4.1	□□□□□ -1.75
CTF18	YMR078C	SHE10	P53075	577 aa		4.1	□□□□□ -1.75
CTF18	YMR078C	RGS2	Q99188	309 aa		4.1	□□□□□ -1.75
CTF18	YMR078C	CBP2	P03874	630 aa	Predicted RBP	4.1	□□□□□ -1.75
CTF18	YMR078C	ERG9	P29704	444 aa		4.1	□□□□□ -1.75
CTF18	YMR078C	MMS21	P38632	267 aa		4.1	□□□□□ -1.75
CTF18	YMR078C	YGL039W	P53183	348 aa	Known RBP	4.1	□□□□□ -1.75
CTF18	YMR078C	ENT5	Q03769	411 aa	Known RBP	4.1	□□□□□ -1.75
CTF18	YMR078C	CUR1	Q06469	252 aa		4.1	□□□□□ -1.75
CTF18	YMR078C	ALE1	Q08548	619 aa		4.1	□□□□□ -1.75
CTF18	YMR078C	CMK2	P22517	447 aa		4.09	□□□□□ -1.75
CTF18	YMR078C	SCS7	Q03529	384 aa		4.09	□□□□□ -1.75
CTF18	YMR078C	YLR177W	Q06251	628 aa		4.09	□□□□□ -1.75
CTF18	YMR078C	RPL18A	P0CX49	186 aa	Known RBP	4.09	□□□□□ -1.76
CTF18	YMR078C	RPL18B	P0CX50	186 aa	Known RBP	4.09	□□□□□ -1.76
CTF18	YMR078C	YPS1	P32329	569 aa		4.09	□□□□□ -1.76
CTF18	YMR078C	TOA1	P32773	286 aa		4.09	□□□□□ -1.76
CTF18	YMR078C	DFG10	P40526	253 aa		4.09	□□□□□ -1.76
CTF18	YMR078C	CAB5	Q03941	241 aa		4.09	□□□□□ -1.76
CTF18	YMR078C	UNG1	P12887	359 aa		4.08	□□□□□ -1.76
CTF18	YMR078C	HAL1	Q01766	294 aa		4.08	□□□□□ -1.76
CTF18	YMR078C	FSH2	Q05015	223 aa		4.08	□□□□□ -1.76
CTF18	YMR078C	COX4	P04037	155 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	PET18	P25362	215 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	DEP1	P31385	405 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	UTH1	P36135	365 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	AIM23	P47015	356 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	RIB4	P50861	169 aa	Predicted RBP	4.07	□□□□□ -1.76
CTF18	YMR078C	CDH1	P53197	566 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	DNL4	Q08387	944 aa	Predicted RBP	4.07	□□□□□ -1.76
CTF18	YMR078C	DCC1	P25559	380 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	BUD2	P33314	1104 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	SWC5	P38326	303 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	SMF2	P38778	549 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	TAF6	P53040	516 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	YMR010W	Q03687	405 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	YLR297W	Q05899	129 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	HIF1	Q12373	385 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	HMS1	Q12398	434 aa		4.07	□□□□□ -1.76
CTF18	YMR078C	PAA1	Q12447	191 aa	Known RBP	4.07	□□□□□ -1.76
CTF18	YMR078C	IGD1	P43598	195 aa		4.06	□□□□□ -1.76
CTF18	YMR078C	YJR054W	P47114	497 aa		4.06	□□□□□ -1.76
CTF18	YMR078C	PXR1	P53335	271 aa	Predicted RBP	4.06	□□□□□ -1.76
CTF18	YMR078C	DBP6	P53734	629 aa	Known RBP	4.06	□□□□□ -1.76
CTF18	YMR078C	BUR2	Q05949	395 aa		4.06	□□□□□ -1.76
CTF18	YMR078C	TAF10	Q12030	206 aa		4.06	□□□□□ -1.76
CTF18	YMR078C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
CTF18	YMR078C	LDS1	P31379	325 aa		4.06	□□□□□ -1.76
CTF18	YMR078C	YKL162C	P36052	402 aa		4.06	□□□□□ -1.76
CTF18	YMR078C	MSS116	P15424	664 aa	Known RBP	4.05	□□□□□ -1.76
CTF18	YMR078C	DBP3	P20447	523 aa	Known RBP	4.05	□□□□□ -1.76
CTF18	YMR078C	YFR018C	P43599	363 aa		4.05	□□□□□ -1.76
CTF18	YMR078C	RVB1	Q03940	463 aa	Known RBP	4.05	□□□□□ -1.76
CTF18	YMR078C	STE7	P06784	515 aa		4.05	□□□□□ -1.76
CTF18	YMR078C	IES6	P32617	166 aa		4.05	□□□□□ -1.76
CTF18	YMR078C	SHE1	P38200	338 aa		4.05	□□□□□ -1.76
CTF18	YMR078C	MNN9	P39107	395 aa	Known RBP	4.05	□□□□□ -1.76
CTF18	YMR078C	YFL040W	P43562	540 aa		4.05	□□□□□ -1.76
CTF18	YMR078C	LOC1	P43586	204 aa	Predicted RBP	4.05	□□□□□ -1.76
CTF18	YMR078C	YGR015C	P53208	328 aa		4.05	□□□□□ -1.76
CTF18	YMR078C	VHT1	P53241	593 aa		4.05	□□□□□ -1.76
CTF18	YMR078C	CWC22	P53333	577 aa	Known RBP	4.05	□□□□□ -1.76
CTF18	YMR078C	ADD37	Q03233	198 aa		4.05	□□□□□ -1.76
CTF18	YMR078C	GAS2	Q06135	555 aa		4.05	□□□□□ -1.76
CTF18	YMR078C	DDC1	Q08949	612 aa		4.05	□□□□□ -1.76
CTF18	YMR078C	GCD2	P12754	651 aa	Predicted RBP	4.04	□□□□□ -1.76
CTF18	YMR078C	WSC4	P38739	605 aa		4.04	□□□□□ -1.76
CTF18	YMR078C	END3	P39013	349 aa		4.04	□□□□□ -1.76
CTF18	YMR078C	YNL320W	P42840	284 aa		4.04	□□□□□ -1.76
CTF18	YMR078C	MOB2	P43563	287 aa		4.04	□□□□□ -1.76
CTF18	YMR078C	BIO3	P50277	480 aa		4.04	□□□□□ -1.76
CTF18	YMR078C	YGR168C	P53293	376 aa		4.04	□□□□□ -1.76
CTF18	YMR078C	MRPS16	Q02608	121 aa		4.04	□□□□□ -1.76
CTF18	YMR078C	SOD1	P00445	154 aa	Known RBP	4.03	□□□□□ -1.76
CTF18	YMR078C	VMA5	P31412	392 aa	Known RBP	4.03	□□□□□ -1.76
CTF18	YMR078C	MRPL27	P36526	146 aa	Predicted RBP	4.03	□□□□□ -1.76
CTF18	YMR078C	YGR018C	P53211	109 aa		4.03	□□□□□ -1.76
CTF18	YMR078C	SLT2	Q00772	484 aa		4.03	□□□□□ -1.76
CTF18	YMR078C	PDC2	P32896	925 aa		4.03	□□□□□ -1.76
CTF18	YMR078C	SOL2	P37262	315 aa		4.03	□□□□□ -1.76
CTF18	YMR078C	DTR1	P38125	572 aa		4.03	□□□□□ -1.76
CTF18	YMR078C	RMI1	Q02685	241 aa		4.03	□□□□□ -1.76
CTF18	YMR078C	YMR111C	Q04461	462 aa	Predicted RBP	4.03	□□□□□ -1.76
CTF18	YMR078C	CHL4	P38907	458 aa		4.02	□□□□□ -1.77
CTF18	YMR078C	INA22	P40576	216 aa		4.02	□□□□□ -1.77
CTF18	YMR078C	CDC40	P40968	455 aa	Predicted RBP	4.02	□□□□□ -1.77
CTF18	YMR078C	YPS5	P53057	165 aa		4.02	□□□□□ -1.77
CTF18	YMR078C	REP1	P03871	373 aa		4.02	□□□□□ -1.77
CTF18	YMR078C	FET3	P38993	636 aa		4.02	□□□□□ -1.77
CTF18	YMR078C	UTP25	P40498	721 aa	Known RBP	4.02	□□□□□ -1.77
CTF18	YMR078C	YBR241C	P38142	488 aa		4.01	□□□□□ -1.77
CTF18	YMR078C	GPI18	P38211	433 aa		4.01	□□□□□ -1.77
CTF18	YMR078C	PCL7	P40186	285 aa		4.01	□□□□□ -1.77
CTF18	YMR078C	YDR115W	Q04598	105 aa		4.01	□□□□□ -1.77
CTF18	YMR078C	ECM18	Q04623	453 aa		4.01	□□□□□ -1.77
CTF18	YMR078C	VAC14	Q06708	880 aa		4.01	□□□□□ -1.77
CTF18	YMR078C	ADH1	P00330	348 aa	Known RBP	4.01	□□□□□ -1.77
CTF18	YMR078C	COS9	P36034	407 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 64.4 ms