RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	ROG1	P53118	685 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	YGL088W	P53151	121 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	CDH1	P53197	566 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	YGR015C	P53208	328 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	MIX17	Q03667	156 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	YMR310C	Q04867	317 aa	Predicted RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	SPO77	Q06134	477 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	PEX30	Q06169	523 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	ECM7	Q06200	448 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	YOL075C	Q08234	1294 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	BUD21	Q08492	214 aa	Predicted RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	RRI2	Q12348	645 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	GRX6	Q12438	231 aa		0.26	□□□□□ -2.37
RCO1	YMR075W	PFK27	Q12471	397 aa	Predicted RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	BEM2	P39960	2167 aa	Known RBP	0.26	□□□□□ -2.37
RCO1	YMR075W	YEL009C-A	A0A023PZF2	135 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	RPS14A	P06367	137 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	CDC31	P06704	161 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	MET2	P08465	486 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	SCH9	P11792	824 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	YAK1	P14680	807 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	ERD1	P16151	362 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	SNF6	P18888	332 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	MIR1	P23641	311 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	RSA4	P25382	515 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	MEI5	P32489	222 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	AGA2	P32781	87 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	CAT2	P32796	670 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	MRPL6	P32904	214 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	SRB2	P34162	210 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	SMP1	P38128	452 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	YBL081W	P38180	368 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	RFT1	P38206	574 aa	Predicted RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	QDR3	P38227	689 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	RCK1	P38622	512 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	TDA11	P38854	504 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	POP2	P39008	433 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	RPS14B	P39516	138 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	0.25	□□□□□ -2.37	not detected
RCO1	YMR075W	MNN5	P46982	586 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	SYF2	P53277	215 aa	Predicted RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	VAC7	P53950	1165 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	VPS9	P54787	451 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	INP1	Q03694	420 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	ARX1	Q03862	593 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	UBX2	Q04228	584 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	YHC1	Q05900	231 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	SNT309	Q06091	175 aa	Predicted RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	PIN3	Q06449	215 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	APC5	Q08683	685 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	RPN8	Q08723	338 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	YOR283W	Q12040	230 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	RTC5	Q12108	567 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	SMC6	Q12749	1114 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	YAL067W-A	Q8TGK6	75 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	NUP157	P40064	1391 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	YLL053C	P0CD98	152 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	RPL12A	P0CX53	165 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	RPL12B	P0CX54	165 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	ARF2	P19146	181 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	RPL16B	P26785	198 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	MIG1	P27705	504 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	ERV1	P27882	189 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	MSK1	P32048	576 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	HMX1	P32339	317 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	ALK2	P32789	676 aa	Predicted RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	CAB3	P36076	571 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	GPX2	P38143	162 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	SHE1	P38200	338 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	TAE1	P38340	232 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	YMR262W	P38430	313 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	SPT8	P38915	602 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	STN1	P38960	494 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	ASP1	P38986	381 aa	Predicted RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	GDI1	P39958	451 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	EDC2	P40023	145 aa	Predicted RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	SLM1	P40485	686 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	COS4	P43542	379 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	YFR018C	P43599	363 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	KEG1	P43614	200 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	YJR054W	P47114	497 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	HSH155	P49955	971 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	YNL146W	P53906	100 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	RMI1	Q02685	241 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	URC2	Q04411	772 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	ERB1	Q04660	807 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	NNT1	Q05874	261 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	YLR456W	Q06199	204 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	IPK1	Q06667	281 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	YFH1	Q07540	174 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	HRT1	Q08273	121 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	YDL211C	Q12121	372 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	YPL245W	Q12179	454 aa	Known RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	FRE8	Q12209	686 aa		0.25	□□□□□ -2.37
RCO1	YMR075W	RRP42	Q12277	265 aa	Predicted RBP	0.25	□□□□□ -2.37
RCO1	YMR075W	COX3	P00420	269 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	CBP2	P03874	630 aa	Predicted RBP	0.24	□□□□□ -2.37
RCO1	YMR075W	RAD3	P06839	778 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	MAS1	P10507	462 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	MRPL20	P22354	195 aa	Predicted RBP	0.24	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms