RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C IST3P40565 148 aaPredicted RBP5.45□□□□□ -1.54
SSK1YLR006C FAR7P43592 221 aa5.45□□□□□ -1.54
SSK1YLR006C PKP2P53170 491 aa5.45□□□□□ -1.54
SSK1YLR006C YGR042WP53227 271 aa5.45□□□□□ -1.54
SSK1YLR006C ELP4Q02884 456 aaKnown RBP5.45□□□□□ -1.54
SSK1YLR006C YFH1Q07540 174 aa5.45□□□□□ -1.54
SSK1YLR006C UIP4Q08926 304 aa5.45□□□□□ -1.54
SSK1YLR006C BAG7Q12128 409 aa5.45□□□□□ -1.54
SSK1YLR006C YJR112W-AQ3E743 109 aa5.45□□□□□ -1.54
SSK1YLR006C MHF2Q3E829 80 aa5.45□□□□□ -1.54
SSK1YLR006C YBR182C-AQ8TGU6 64 aa5.45□□□□□ -1.54
SSK1YLR006C YLR302CO13544 120 aa5.45□□□□□ -1.54
SSK1YLR006C HTA2P04912 132 aa5.45□□□□□ -1.54
SSK1YLR006C HIP1P06775 603 aa5.45□□□□□ -1.54
SSK1YLR006C DFR1P07807 211 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
SSK1YLR006C MRP13P12686 339 aa5.45□□□□□ -1.54
SSK1YLR006C SNF6P18888 332 aa5.45□□□□□ -1.54
SSK1YLR006C SDH2P21801 266 aa5.45□□□□□ -1.54
SSK1YLR006C MLF3P32047 452 aa5.45□□□□□ -1.54
SSK1YLR006C RML2P32611 393 aa5.45□□□□□ -1.54
SSK1YLR006C LIP5P32875 414 aa5.45□□□□□ -1.54
SSK1YLR006C TAF14P35189 244 aa5.45□□□□□ -1.54
SSK1YLR006C JLP2P40206 208 aa5.45□□□□□ -1.54
SSK1YLR006C RPA34P47006 233 aaPredicted RBP5.45□□□□□ -1.54
SSK1YLR006C AIM23P47015 356 aa5.45□□□□□ -1.54
SSK1YLR006C YJL118WP47022 219 aa5.45□□□□□ -1.54
SSK1YLR006C TIS11P47977 285 aa5.45□□□□□ -1.54
SSK1YLR006C PRP24P49960 444 aaKnown RBP5.45□□□□□ -1.54
SSK1YLR006C SHY1P53266 389 aa5.45□□□□□ -1.54
SSK1YLR006C GRX5Q02784 150 aa5.45□□□□□ -1.54
SSK1YLR006C SGO1Q08490 590 aa5.45□□□□□ -1.54
SSK1YLR006C HRK1Q08732 759 aaKnown RBP5.45□□□□□ -1.54
SSK1YLR006C YOR029WQ12243 111 aa5.45□□□□□ -1.54
SSK1YLR006C HAP2P06774 265 aa5.44□□□□□ -1.54
SSK1YLR006C RPS4AP0CX35 261 aaKnown RBP5.44□□□□□ -1.54
SSK1YLR006C RPS4BP0CX36 261 aaKnown RBP5.44□□□□□ -1.54
SSK1YLR006C ERG8P24521 451 aa5.44□□□□□ -1.54
SSK1YLR006C YCL002CP25565 263 aa5.44□□□□□ -1.54
SSK1YLR006C MRT4P33201 236 aaKnown RBP5.44□□□□□ -1.54
SSK1YLR006C SPT23P35210 1082 aa5.44□□□□□ -1.54
SSK1YLR006C LDB7P38210 180 aa5.44□□□□□ -1.54
SSK1YLR006C STB5P38699 743 aa5.44□□□□□ -1.54
SSK1YLR006C YHR112CP38716 378 aa5.44□□□□□ -1.54
SSK1YLR006C PTC2P39966 464 aaKnown RBP5.44□□□□□ -1.54
SSK1YLR006C AYR1P40471 297 aa5.44□□□□□ -1.54
SSK1YLR006C CIN5P40917 295 aa5.44□□□□□ -1.54
SSK1YLR006C HIT1P46973 164 aa5.44□□□□□ -1.54
SSK1YLR006C AMA1P50082 593 aa5.44□□□□□ -1.54
SSK1YLR006C CDA2Q06703 312 aa5.44□□□□□ -1.54
SSK1YLR006C MED2Q12124 431 aa5.44□□□□□ -1.54
SSK1YLR006C COX2P00410 251 aa5.44□□□□□ -1.54
SSK1YLR006C VPS33P20795 691 aa5.44□□□□□ -1.54
SSK1YLR006C MET22P32179 357 aa5.44□□□□□ -1.54
SSK1YLR006C RPS1AP33442 255 aaKnown RBP5.44□□□□□ -1.54
SSK1YLR006C YOX1P34161 385 aa5.44□□□□□ -1.54
SSK1YLR006C RCN1P36054 211 aa5.44□□□□□ -1.54
SSK1YLR006C MRPL36P36531 177 aa5.44□□□□□ -1.54
SSK1YLR006C AST2P39945 430 aaKnown RBP5.44□□□□□ -1.54
SSK1YLR006C SYG1P40528 902 aa5.44□□□□□ -1.54
SSK1YLR006C CIN1P40987 1014 aa5.44□□□□□ -1.54
SSK1YLR006C CWC23P52868 283 aaPredicted RBP5.44□□□□□ -1.54
SSK1YLR006C STD1Q02794 444 aa5.44□□□□□ -1.54
SSK1YLR006C MET31Q03081 177 aa5.44□□□□□ -1.54
SSK1YLR006C PIR3Q03180 325 aa5.44□□□□□ -1.54
SSK1YLR006C CAB5Q03941 241 aa5.44□□□□□ -1.54
SSK1YLR006C LRS4Q04087 347 aaKnown RBP5.44□□□□□ -1.54
SSK1YLR006C YDR124WQ04608 324 aa5.44□□□□□ -1.54
SSK1YLR006C COA4Q05809 96 aa5.44□□□□□ -1.54
SSK1YLR006C SUL2Q12325 893 aa5.44□□□□□ -1.54
SSK1YLR006C Q0182Q9ZZW1 134 aa5.44□□□□□ -1.54
SSK1YLR006C HMG2P12684 1045 aa5.43□□□□□ -1.54
SSK1YLR006C RPL24BP24000 155 aaKnown RBP5.43□□□□□ -1.54
SSK1YLR006C SRP102P36057 244 aaPredicted RBP5.43□□□□□ -1.54
SSK1YLR006C ERV46P39727 415 aa5.43□□□□□ -1.54
SSK1YLR006C DLD3P39976 496 aaKnown RBP5.43□□□□□ -1.54
SSK1YLR006C COG3P40094 801 aa5.43□□□□□ -1.54
SSK1YLR006C LAS21P40367 830 aa5.43□□□□□ -1.54
SSK1YLR006C BUD13P46947 266 aaPredicted RBP5.43□□□□□ -1.54
SSK1YLR006C MSE1P48525 536 aa5.43□□□□□ -1.54
SSK1YLR006C NAS6P50086 228 aa5.43□□□□□ -1.54
SSK1YLR006C IMD3P50095 523 aaKnown RBP5.43□□□□□ -1.54
SSK1YLR006C LEE1Q02799 301 aaKnown RBP5.43□□□□□ -1.54
SSK1YLR006C ISU1Q03020 165 aa5.43□□□□□ -1.54
SSK1YLR006C PRM15Q03262 622 aa5.43□□□□□ -1.54
SSK1YLR006C GIS1Q03833 894 aa5.43□□□□□ -1.54
SSK1YLR006C YDR132CQ03900 495 aa5.43□□□□□ -1.54
SSK1YLR006C EMI1Q04406 187 aa5.43□□□□□ -1.54
SSK1YLR006C YDR514CQ04408 483 aa5.43□□□□□ -1.54
SSK1YLR006C MLH3Q12083 715 aa5.43□□□□□ -1.54
SSK1YLR006C LCB4Q12246 624 aa5.43□□□□□ -1.54
SSK1YLR006C YLR108CQ12259 485 aa5.43□□□□□ -1.54
SSK1YLR006C WTM1Q12363 437 aaKnown RBP5.43□□□□□ -1.54
SSK1YLR006C TY1A-LR4P0C2I8 440 aaKnown RBP5.42□□□□□ -1.54
SSK1YLR006C TY1A-DR6P0CX70 440 aa5.42□□□□□ -1.54
SSK1YLR006C TY1A-ER1P0CX71 440 aa5.42□□□□□ -1.54
SSK1YLR006C TY1A-LR2P0CX72 440 aa5.42□□□□□ -1.54
SSK1YLR006C TY1A-PLP0CX73 440 aa5.42□□□□□ -1.54
SSK1YLR006C TY1A-JR1P0CX74 440 aa5.42□□□□□ -1.54
SSK1YLR006C TY1A-LR3P0CX75 440 aa5.42□□□□□ -1.54
SSK1YLR006C TY1A-ML2P0CX76 440 aa5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms