RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W MRPL10P36520 322 aa3.41□□□□□ -1.86
UBP12YJL197W YNL234WP53857 426 aa3.41□□□□□ -1.86
UBP12YJL197W PBP4Q07362 185 aaKnown RBP3.41□□□□□ -1.86
UBP12YJL197W MEX67Q99257 599 aaKnown RBP3.41□□□□□ -1.86
UBP12YJL197W YHB1P39676 399 aaKnown RBP3.41□□□□□ -1.86
UBP12YJL197W IRC4Q03036 179 aa3.41□□□□□ -1.86
UBP12YJL197W CDC33P07260 213 aaKnown RBP3.4□□□□□ -1.86
UBP12YJL197W REV1P12689 985 aa3.4□□□□□ -1.86
UBP12YJL197W STE18P18852 110 aa3.4□□□□□ -1.86
UBP12YJL197W MRX3P38172 270 aa3.4□□□□□ -1.86
UBP12YJL197W SLM1P40485 686 aa3.4□□□□□ -1.86
UBP12YJL197W IZH4Q99393 312 aa3.4□□□□□ -1.86
UBP12YJL197W PCL6P40038 420 aa3.4□□□□□ -1.86
UBP12YJL197W GWT1P47026 490 aa3.4□□□□□ -1.86
UBP12YJL197W TRM112P53738 135 aaPredicted RBP3.4□□□□□ -1.86
UBP12YJL197W YAP7Q08182 245 aa3.4□□□□□ -1.86
UBP12YJL197W HIS1P00498 297 aaKnown RBP3.4□□□□□ -1.87
UBP12YJL197W ZRT1P32804 376 aa3.4□□□□□ -1.87
UBP12YJL197W TIR2P33890 251 aa3.4□□□□□ -1.87
UBP12YJL197W HOT13P36078 116 aa3.4□□□□□ -1.87
UBP12YJL197W PRS2P38620 318 aaKnown RBP3.4□□□□□ -1.87
UBP12YJL197W RRP3P38712 501 aaKnown RBP3.4□□□□□ -1.87
UBP12YJL197W GEP4P38812 185 aa3.4□□□□□ -1.87
UBP12YJL197W CHS7P38843 316 aa3.4□□□□□ -1.87
UBP12YJL197W YCH1P42937 148 aa3.4□□□□□ -1.87
UBP12YJL197W ABM1P47146 123 aa3.4□□□□□ -1.87
UBP12YJL197W YBL111CQ3E7Y5 667 aa3.4□□□□□ -1.87
UBP12YJL197W THP2O13539 261 aaKnown RBP3.39□□□□□ -1.87
UBP12YJL197W VPS51P36116 164 aa3.39□□□□□ -1.87
UBP12YJL197W RCK2P38623 610 aa3.39□□□□□ -1.87
UBP12YJL197W MST28P39552 234 aa3.39□□□□□ -1.87
UBP12YJL197W THO1P40040 218 aaKnown RBP3.39□□□□□ -1.87
UBP12YJL197W YPL062WQ02781 134 aa3.39□□□□□ -1.87
UBP12YJL197W YPL080CQ02826 108 aa3.39□□□□□ -1.87
UBP12YJL197W YMR181CQ03231 154 aa3.39□□□□□ -1.87
UBP12YJL197W RPL27AP0C2H6 136 aaKnown RBP3.39□□□□□ -1.87
UBP12YJL197W RPL27BP0C2H7 136 aaKnown RBP3.39□□□□□ -1.87
UBP12YJL197W SSC1P0CS90 654 aaKnown RBP3.39□□□□□ -1.87
UBP12YJL197W ATP7P30902 174 aa3.39□□□□□ -1.87
UBP12YJL197W RME1P32338 300 aaKnown RBP3.39□□□□□ -1.87
UBP12YJL197W PDR3P33200 976 aa3.39□□□□□ -1.87
UBP12YJL197W CSE1P33307 960 aa3.39□□□□□ -1.87
UBP12YJL197W PRP18P33411 251 aaPredicted RBP3.39□□□□□ -1.87
UBP12YJL197W RIB1P38066 345 aa3.39□□□□□ -1.87
UBP12YJL197W GUF1P46943 645 aa3.39□□□□□ -1.87
UBP12YJL197W TIS11P47977 285 aa3.39□□□□□ -1.87
UBP12YJL197W YMR027WQ04371 470 aa3.39□□□□□ -1.87
UBP12YJL197W GIM5Q04493 163 aa3.39□□□□□ -1.87
UBP12YJL197W SET6Q12529 373 aa3.39□□□□□ -1.87
UBP12YJL197W DET1Q99288 334 aaKnown RBP3.39□□□□□ -1.87
UBP12YJL197W ILV1P00927 576 aaKnown RBP3.39□□□□□ -1.87
UBP12YJL197W GPX2P38143 162 aa3.39□□□□□ -1.87
UBP12YJL197W DSN1P40568 576 aa3.39□□□□□ -1.87
UBP12YJL197W RMR1P53060 241 aa3.39□□□□□ -1.87
UBP12YJL197W ARK1P53974 638 aa3.39□□□□□ -1.87
UBP12YJL197W LOT6Q07923 191 aa3.39□□□□□ -1.87
UBP12YJL197W GAT3Q07928 141 aa3.39□□□□□ -1.87
UBP12YJL197W YEH2Q07950 538 aa3.39□□□□□ -1.87
UBP12YJL197W ABP140Q08641 628 aaKnown RBP3.39□□□□□ -1.87
UBP12YJL197W KOG1P38873 1557 aa3.38□□□□□ -1.87
UBP12YJL197W CAP2P13517 287 aa3.38□□□□□ -1.87
UBP12YJL197W RNA15P25299 296 aaPredicted RBP3.38□□□□□ -1.87
UBP12YJL197W YHK8P38776 514 aa3.38□□□□□ -1.87
UBP12YJL197W YPT35P38815 214 aaKnown RBP3.38□□□□□ -1.87
UBP12YJL197W YGR210CP42942 411 aa3.38□□□□□ -1.87
UBP12YJL197W PMT4P46971 762 aa3.38□□□□□ -1.87
UBP12YJL197W TAD2P47058 250 aa3.38□□□□□ -1.87
UBP12YJL197W YNL247WP53852 767 aaKnown RBP3.38□□□□□ -1.87
UBP12YJL197W IDP3P53982 420 aaKnown RBP3.38□□□□□ -1.87
UBP12YJL197W OST6Q03723 332 aa3.38□□□□□ -1.87
UBP12YJL197W BCH1Q05029 724 aa3.38□□□□□ -1.87
UBP12YJL197W DCR2Q05924 578 aa3.38□□□□□ -1.87
UBP12YJL197W ASR1Q06834 288 aa3.38□□□□□ -1.87
UBP12YJL197W YLR012CQ07927 99 aa3.38□□□□□ -1.87
UBP12YJL197W AI5_BETAQ9ZZX0 354 aa3.38□□□□□ -1.87
UBP12YJL197W EXG1P23776 448 aaKnown RBP3.38□□□□□ -1.87
UBP12YJL197W PEX3P28795 441 aa3.38□□□□□ -1.87
UBP12YJL197W PTR2P32901 601 aa3.38□□□□□ -1.87
UBP12YJL197W PPZ2P33329 710 aa3.38□□□□□ -1.87
UBP12YJL197W MTW1P39731 289 aa3.38□□□□□ -1.87
UBP12YJL197W COX15P40086 486 aa3.38□□□□□ -1.87
UBP12YJL197W HOC1P47124 396 aa3.38□□□□□ -1.87
UBP12YJL197W GND2P53319 492 aa3.38□□□□□ -1.87
UBP12YJL197W VBA1Q04301 562 aa3.38□□□□□ -1.87
UBP12YJL197W NDE2Q07500 545 aa3.38□□□□□ -1.87
UBP12YJL197W IES6P32617 166 aa3.38□□□□□ -1.87
UBP12YJL197W YKL063CP35725 167 aa3.38□□□□□ -1.87
UBP12YJL197W OAR1P35731 278 aa3.38□□□□□ -1.87
UBP12YJL197W VPS21P36017 210 aaKnown RBP3.38□□□□□ -1.87
UBP12YJL197W DTR1P38125 572 aa3.38□□□□□ -1.87
UBP12YJL197W RTC3P38804 111 aaPredicted RBP3.38□□□□□ -1.87
UBP12YJL197W SWC4P53201 476 aa3.38□□□□□ -1.87
UBP12YJL197W FUS2Q05670 677 aa3.38□□□□□ -1.87
UBP12YJL197W DAP1Q12091 152 aa3.38□□□□□ -1.87
UBP12YJL197W MSL5Q12186 476 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
UBP12YJL197W RPL31AP0C2H8 113 aaKnown RBP3.37□□□□□ -1.87
UBP12YJL197W SLY1P22213 666 aa3.37□□□□□ -1.87
UBP12YJL197W URE2P23202 354 aaKnown RBP3.37□□□□□ -1.87
UBP12YJL197W GLC7P32598 312 aaKnown RBP3.37□□□□□ -1.87
UBP12YJL197W SUR2P38992 349 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms