RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C EFM5P53200 248 aaKnown RBP3.31□□□□□ -1.88
SSM4YIL030C MRPL22P53881 309 aa3.31□□□□□ -1.88
SSM4YIL030C EFM6P53970 246 aa3.31□□□□□ -1.88
SSM4YIL030C CCE1Q03702 353 aa3.31□□□□□ -1.88
SSM4YIL030C RKM2Q03942 479 aa3.31□□□□□ -1.88
SSM4YIL030C DCR2Q05924 578 aa3.31□□□□□ -1.88
SSM4YIL030C FEX1Q08913 375 aa3.31□□□□□ -1.88
SSM4YIL030C PUS9Q12069 462 aa3.31□□□□□ -1.88
SSM4YIL030C FLP1P03870 423 aa3.31□□□□□ -1.88
SSM4YIL030C RPL25P04456 142 aaKnown RBP3.31□□□□□ -1.88
SSM4YIL030C ERG20P08524 352 aaKnown RBP3.31□□□□□ -1.88
SSM4YIL030C MATALPHA1P0CY06 175 aa3.31□□□□□ -1.88
SSM4YIL030C HMLALPHA1P0CY07 175 aa3.31□□□□□ -1.88
SSM4YIL030C FPR1P20081 114 aaKnown RBP3.31□□□□□ -1.88
SSM4YIL030C VPS34P22543 875 aa3.31□□□□□ -1.88
SSM4YIL030C SPT10P35208 640 aa3.31□□□□□ -1.88
SSM4YIL030C SHM2P37291 469 aaKnown RBP3.31□□□□□ -1.88
SSM4YIL030C BSD2P38356 321 aa3.31□□□□□ -1.88
SSM4YIL030C YIL161WP40449 235 aaKnown RBP3.31□□□□□ -1.88
SSM4YIL030C PAN6P40459 309 aa3.31□□□□□ -1.88
SSM4YIL030C ERV14P53173 138 aa3.31□□□□□ -1.88
SSM4YIL030C COS1P53822 381 aa3.31□□□□□ -1.88
SSM4YIL030C KGD2P19262 463 aaPredicted RBP3.31□□□□□ -1.88
SSM4YIL030C AHC2P25649 128 aa3.31□□□□□ -1.88
SSM4YIL030C ACB1P31787 87 aa3.31□□□□□ -1.88
SSM4YIL030C LRP1P38801 184 aaKnown RBP3.31□□□□□ -1.88
SSM4YIL030C LAS21P40367 830 aa3.31□□□□□ -1.88
SSM4YIL030C ECM27P47144 725 aa3.31□□□□□ -1.88
SSM4YIL030C MTM1P53320 366 aa3.31□□□□□ -1.88
SSM4YIL030C MPP6P53725 186 aaPredicted RBP3.31□□□□□ -1.88
SSM4YIL030C BSC5P53755 489 aa3.31□□□□□ -1.88
SSM4YIL030C RSC4Q02206 625 aa3.31□□□□□ -1.88
SSM4YIL030C YMR206WQ03695 313 aa3.31□□□□□ -1.88
SSM4YIL030C CST9Q06032 482 aa3.31□□□□□ -1.88
SSM4YIL030C PDR8Q06149 701 aa3.31□□□□□ -1.88
SSM4YIL030C SKI7Q08491 747 aaPredicted RBP3.31□□□□□ -1.88
SSM4YIL030C ICL2Q12031 575 aa3.31□□□□□ -1.88
SSM4YIL030C MDM32Q12171 622 aa3.31□□□□□ -1.88
SSM4YIL030C AAC1P04710 309 aa3.3□□□□□ -1.88
SSM4YIL030C EXG1P23776 448 aaKnown RBP3.3□□□□□ -1.88
SSM4YIL030C CWH43P25618 953 aa3.3□□□□□ -1.88
SSM4YIL030C ISC10P32645 267 aa3.3□□□□□ -1.88
SSM4YIL030C MRPL36P36531 177 aa3.3□□□□□ -1.88
SSM4YIL030C SHE1P38200 338 aa3.3□□□□□ -1.88
SSM4YIL030C ALG8P40351 577 aa3.3□□□□□ -1.88
SSM4YIL030C VMA13P41807 478 aaKnown RBP3.3□□□□□ -1.88
SSM4YIL030C SDT1P53078 280 aa3.3□□□□□ -1.88
SSM4YIL030C MRPL50P53724 139 aa3.3□□□□□ -1.88
SSM4YIL030C PEX25Q02969 394 aa3.3□□□□□ -1.88
SSM4YIL030C FIN1Q03898 291 aa3.3□□□□□ -1.88
SSM4YIL030C YMR253CQ04835 414 aa3.3□□□□□ -1.88
SSM4YIL030C HDA2Q06629 674 aa3.3□□□□□ -1.88
SSM4YIL030C RSC58Q07979 502 aa3.3□□□□□ -1.88
SSM4YIL030C YOL073CQ08232 322 aa3.3□□□□□ -1.88
SSM4YIL030C BTS1Q12051 335 aa3.3□□□□□ -1.88
SSM4YIL030C SVS1Q12254 260 aa3.3□□□□□ -1.88
SSM4YIL030C TY1A-NL1Q12391 440 aaKnown RBP3.3□□□□□ -1.88
SSM4YIL030C LPX1Q12405 387 aaKnown RBP3.3□□□□□ -1.88
SSM4YIL030C CHL1P22516 861 aaPredicted RBP3.3□□□□□ -1.88
SSM4YIL030C GSH1P32477 678 aa3.3□□□□□ -1.88
SSM4YIL030C LHP1P33399 275 aaKnown RBP3.3□□□□□ -1.88
SSM4YIL030C FMP52P40008 231 aa3.3□□□□□ -1.88
SSM4YIL030C YMR144WP40214 342 aaKnown RBP3.3□□□□□ -1.88
SSM4YIL030C PHB1P40961 287 aa3.3□□□□□ -1.88
SSM4YIL030C BAP3P41815 604 aa3.3□□□□□ -1.88
SSM4YIL030C SOL1P50278 321 aa3.3□□□□□ -1.88
SSM4YIL030C PEX30Q06169 523 aa3.3□□□□□ -1.88
SSM4YIL030C COX3P00420 269 aa3.3□□□□□ -1.88
SSM4YIL030C BEM1P29366 551 aa3.3□□□□□ -1.88
SSM4YIL030C NTH1P32356 751 aa3.3□□□□□ -1.88
SSM4YIL030C RPD3P32561 433 aa3.3□□□□□ -1.88
SSM4YIL030C SPS19P32573 292 aaKnown RBP3.3□□□□□ -1.88
SSM4YIL030C RPS0AP32905 252 aaKnown RBP3.3□□□□□ -1.88
SSM4YIL030C SDH3P33421 198 aa3.3□□□□□ -1.88
SSM4YIL030C SDH4P37298 181 aa3.3□□□□□ -1.88
SSM4YIL030C TCM62P38228 572 aaKnown RBP3.3□□□□□ -1.88
SSM4YIL030C SHE3P38272 425 aaKnown RBP3.3□□□□□ -1.88
SSM4YIL030C WSC4P38739 605 aa3.3□□□□□ -1.88
SSM4YIL030C PRM5P40476 318 aa3.3□□□□□ -1.88
SSM4YIL030C SIP4P46954 829 aa3.3□□□□□ -1.88
SSM4YIL030C GWT1P47026 490 aa3.3□□□□□ -1.88
SSM4YIL030C LSM8P47093 109 aaKnown RBP3.3□□□□□ -1.88
SSM4YIL030C ZRG17P53735 605 aa3.3□□□□□ -1.88
SSM4YIL030C YMR279CQ03263 540 aa3.3□□□□□ -1.88
SSM4YIL030C SNT309Q06091 175 aaPredicted RBP3.3□□□□□ -1.88
SSM4YIL030C PEX27Q08580 376 aa3.3□□□□□ -1.88
SSM4YIL030C SKM1Q12469 655 aa3.3□□□□□ -1.88
SSM4YIL030C YPR145C-AQ2V2P0 78 aa3.3□□□□□ -1.88
SSM4YIL030C DET1Q99288 334 aaKnown RBP3.3□□□□□ -1.88
SSM4YIL030C NAR1P23503 491 aaKnown RBP3.29□□□□□ -1.88
SSM4YIL030C YCL002CP25565 263 aa3.29□□□□□ -1.88
SSM4YIL030C HOM6P31116 359 aaKnown RBP3.29□□□□□ -1.88
SSM4YIL030C WBP1P33767 430 aaKnown RBP3.29□□□□□ -1.88
SSM4YIL030C YBR238CP38330 731 aaKnown RBP3.29□□□□□ -1.88
SSM4YIL030C YEL073CP39974 107 aa3.29□□□□□ -1.88
SSM4YIL030C IDP2P41939 412 aa3.29□□□□□ -1.88
SSM4YIL030C DAN1P47178 298 aa3.29□□□□□ -1.88
SSM4YIL030C CRR1Q05790 422 aa3.29□□□□□ -1.88
SSM4YIL030C COQ10Q08058 207 aa3.29□□□□□ -1.88
SSM4YIL030C MTF1P14908 341 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 47 ms