RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B SWI4P25302 1093 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B RML2P32611 393 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B VAM7P32912 316 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B TIP20P33891 701 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YBR139WP38109 508 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B FET3P38993 636 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B SEN34P39707 275 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B PUG1P40100 303 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B IMA5P40884 581 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B UFE1P41834 346 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YGL204CP53089 101 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B HHO1P53551 258 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YNR068CP53754 272 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B GIS2P53849 153 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
YGR109W-BYGR109W-B YNL040WP53960 456 aaPredicted RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B PET117Q02771 107 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B BET5Q03630 159 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B PDS5Q04264 1277 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YMR027WQ04371 470 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B ECM38Q05902 660 aaPredicted RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B KAP95Q06142 861 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B ATG26Q06321 1198 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B SGT1Q08446 395 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YOR365CQ08844 703 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YLR053CQ12026 108 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B GET4Q12125 312 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B RIO1Q12196 484 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B INP53Q12271 1107 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B FRE6Q12473 712 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B PUT2P07275 575 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B ADH4P10127 382 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B MET16P18408 261 aaPredicted RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B SEC22P22214 214 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B AFG1P32317 509 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B MRPL11P36521 249 aaPredicted RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B MRX3P38172 270 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B ZTA1P38230 334 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B SDS24P38314 527 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B ERG7P38604 731 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YMR144WP40214 342 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B PAC11P40960 533 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B RSM27P53305 110 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B OAZ1Q02803 292 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YPL113CQ02961 396 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B MSC1Q03104 513 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YMR155WQ03795 547 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B NNT1Q05874 261 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B ARC18Q05933 178 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B MFG1Q07684 458 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B PLB3Q08108 686 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B SLD7Q08457 257 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B GPM2Q12008 311 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YPR022CQ12139 1133 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YOL114CQ12322 202 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B RTN2Q12443 393 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B RAX2Q12465 1220 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B SLO1Q3E784 85 aa1.47□□□□□ -2.17
YGR109W-BYGR109W-B YDL085C-AQ3E7B7 68 aaKnown RBP1.47□□□□□ -2.17
YGR109W-BYGR109W-B CDC28P00546 298 aaKnown RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B LEU4P06208 619 aaKnown RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B CBP6P07253 162 aaPredicted RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B YBR121C-AP0C5L4 52 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B COS2P0CX12 379 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B COS3P0CX13 379 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B NSP1P14907 823 aaKnown RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B RIT1P23796 513 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B MRP49P32388 137 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B RIM1P32445 135 aaKnown RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B SPR1P32603 445 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B FRE1P32791 686 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B GDH2P33327 1092 aaKnown RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B SKT5P34226 696 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B RRP4P38792 359 aaKnown RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B RBG1P39729 369 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B RMD6P39975 231 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B SER3P40054 469 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B LCP5P40079 357 aaPredicted RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B CHS6P40955 746 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B COS4P43542 379 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B PAC10P48363 199 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B POP6P53218 158 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B FYV6P53913 173 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B ESBP6P53918 673 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B ADE16P54113 591 aaKnown RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B NUP49Q02199 472 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B RQC1Q05468 723 aaKnown RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B CTR3Q06686 241 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B RIX7Q07844 837 aaKnown RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B HRT3Q12347 344 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B YBR298C-AQ8TGK4 73 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B RPS16AP0CX51 143 aaKnown RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B RPS16BP0CX52 143 aaKnown RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B TCP1P12612 559 aaKnown RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B SNF4P12904 322 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B CLB2P24869 491 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B RPS2P25443 254 aaKnown RBP1.46□□□□□ -2.18
YGR109W-BYGR109W-B MDH3P32419 343 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
YGR109W-BYGR109W-B CMC1P36064 111 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B BMT2P38278 337 aa1.46□□□□□ -2.18
YGR109W-BYGR109W-B DIA4P38705 446 aaPredicted RBP1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms