RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC9	YGR009C	HEM15	P16622	393 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	ACH1	P32316	526 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	CYS4	P32582	507 aa	Known RBP	4.58	□□□□□ -1.68
SEC9	YGR009C	DRE2	P36152	348 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	CBP4	P37267	147 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	MRPL16	P38064	232 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	GOS1	P38736	223 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	YHR210C	P38893	341 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	NPT1	P39683	429 aa	Known RBP	4.58	□□□□□ -1.68
SEC9	YGR009C	SSP120	P39931	234 aa	Known RBP	4.58	□□□□□ -1.68
SEC9	YGR009C	RFC2	P40348	353 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	GSM1	P42950	618 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	BST1	P43571	1029 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	AAD10	P47182	288 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	VPS73	P53142	486 aa	Known RBP	4.58	□□□□□ -1.68
SEC9	YGR009C	JAC1	P53193	184 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	YGR283C	P53336	341 aa	Predicted RBP	4.58	□□□□□ -1.68
SEC9	YGR009C	BOR1	P53838	576 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	YNL184C	P53876	108 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	SPP2	Q02521	185 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	YPL077C	Q02831	240 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	PLB2	Q03674	706 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	ATG39	Q06159	398 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	PRP11	Q07350	266 aa	Predicted RBP	4.58	□□□□□ -1.68
SEC9	YGR009C	COS7	Q07788	383 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	COX17	Q12287	69 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	JLP1	Q12358	412 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	TRM11	Q12463	433 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	HSL1	P34244	1518 aa		4.58	□□□□□ -1.68
SEC9	YGR009C	LTE1	P07866	1435 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	TPI1	P00942	248 aa	Known RBP	4.57	□□□□□ -1.68
SEC9	YGR009C	STF2	P16965	84 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	ART10	P18634	518 aa	Known RBP	4.57	□□□□□ -1.68
SEC9	YGR009C	NUP1	P20676	1076 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	SCM4	P32564	187 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	CAT2	P32796	670 aa	Known RBP	4.57	□□□□□ -1.68
SEC9	YGR009C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
SEC9	YGR009C	TRM2	P33753	639 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	YPT53	P36019	220 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	CMC1	P36064	111 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	YPT31	P38555	223 aa	Known RBP	4.57	□□□□□ -1.68
SEC9	YGR009C	MIP6	P38760	659 aa	Known RBP	4.57	□□□□□ -1.68
SEC9	YGR009C	RPF1	P38805	295 aa	Known RBP	4.57	□□□□□ -1.68
SEC9	YGR009C	IKI1	P38874	309 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	UTP7	P40055	554 aa	Known RBP	4.57	□□□□□ -1.68
SEC9	YGR009C	SHO1	P40073	367 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	COG3	P40094	801 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	COA1	P40452	197 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	IRC8	P47046	822 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	DOC1	P53068	250 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	TPN1	P53099	579 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	SWC4	P53201	476 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	DUS1	P53759	423 aa	Known RBP	4.57	□□□□□ -1.68
SEC9	YGR009C	ASI2	P53895	289 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	ERG5	P54781	538 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	TIM8	P57744	87 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	UBP16	Q02863	499 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	CYK3	Q07533	885 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	FSF1	Q12029	327 aa	Known RBP	4.57	□□□□□ -1.68
SEC9	YGR009C	FCF2	Q12035	217 aa	Predicted RBP	4.57	□□□□□ -1.68
SEC9	YGR009C	RRD2	Q12461	358 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	UBA3	Q99344	299 aa		4.57	□□□□□ -1.68
SEC9	YGR009C	GEA2	P39993	1459 aa	Known RBP	4.57	□□□□□ -1.68
SEC9	YGR009C	POX1	P13711	748 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	CPT1	P17898	393 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	SPO7	P18410	259 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	MCK1	P21965	375 aa	Known RBP	4.56	□□□□□ -1.68
SEC9	YGR009C	PTC6	P25646	442 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	CPR3	P25719	182 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	VMA5	P31412	392 aa	Known RBP	4.56	□□□□□ -1.68
SEC9	YGR009C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
SEC9	YGR009C	FRE1	P32791	686 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	YKL107W	P34251	309 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	SPT23	P35210	1082 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	FLO10	P36170	1169 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	EXO1	P39875	702 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	VPS52	P39904	641 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	HAT2	P39984	401 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	MAF1	P41910	395 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	SLS1	P42900	643 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	YJL107C	P42947	387 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	TRS85	P46944	698 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	ADO1	P47143	340 aa	Known RBP	4.56	□□□□□ -1.68
SEC9	YGR009C	FMP48	P53233	369 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	YGR079W	P53249	370 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	BIO5	P53744	561 aa	Known RBP	4.56	□□□□□ -1.68
SEC9	YGR009C	ABF2	Q02486	183 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	YDR132C	Q03900	495 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	AGE1	Q04412	482 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	YML096W	Q04489	525 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	HRD3	Q05787	833 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	MRPL51	Q06090	140 aa	Predicted RBP	4.56	□□□□□ -1.68
SEC9	YGR009C	SFH1	Q06168	426 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	SYC1	Q08553	188 aa	Predicted RBP	4.56	□□□□□ -1.68
SEC9	YGR009C	TMA16	Q08687	178 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	SPE4	Q12455	300 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	YPR1	Q12458	312 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	YPT6	Q99260	215 aa		4.56	□□□□□ -1.68
SEC9	YGR009C	MES1	P00958	751 aa	Known RBP	4.56	□□□□□ -1.68
SEC9	YGR009C	OCH1	P31755	480 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms