RNA–Protein interactions for RNA: YFR049W

YMR31, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene YMR31, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR31	YFR049W	MEI5	P32489	222 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	KAR9	P32526	644 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	DTR1	P38125	572 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	SMF2	P38778	549 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	CTM1	P38818	585 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	NDT80	P38830	627 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	MDM31	P38880	579 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	PET100	P38958	111 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	YJL213W	P40896	331 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	YCH1	P42937	148 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	BNA6	P43619	295 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	CTK3	P46963	296 aa	Predicted RBP	2.31	□□□□□ -2.04
YMR31	YFR049W	FMP33	P46998	180 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	SCS3	P53012	380 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	MKC7	P53379	596 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	MTQ1	P53944	314 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	SED5	Q01590	340 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	IRC4	Q03036	179 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	TDA1	Q03533	586 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	UBX2	Q04228	584 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	GPN3	Q06543	272 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	SMC5	Q08204	1093 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	TMS1	Q12116	473 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	MED4	Q12343	284 aa		2.31	□□□□□ -2.04
YMR31	YFR049W	SSK22	P25390	1331 aa	Predicted RBP	2.31	□□□□□ -2.04
YMR31	YFR049W	CYC3	P06182	269 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	RNA14	P25298	677 aa	Known RBP	2.3	□□□□□ -2.04
YMR31	YFR049W	CPR4	P25334	318 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	DAL2	P25335	343 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	RPL16A	P26784	199 aa	Known RBP	2.3	□□□□□ -2.04
YMR31	YFR049W	ERG9	P29704	444 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	NTG1	P31378	399 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	IMP3	P32899	183 aa	Predicted RBP	2.3	□□□□□ -2.04
YMR31	YFR049W	YKR015C	P36111	568 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.3	□□□□□ -2.04	not detected
YMR31	YFR049W	PRM5	P40476	318 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	YIL067C	P40514	678 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	YGR210C	P42942	411 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	COS10	P52924	374 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	OKP1	P53298	406 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	BIO4	P53630	237 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	PET117	Q02771	107 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	COX20	Q04935	205 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	BER1	Q06688	274 aa	Known RBP	2.3	□□□□□ -2.04
YMR31	YFR049W	YPR091C	Q06833	770 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	BSC6	Q08280	497 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	ESA1	Q08649	445 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	HNT3	Q08702	217 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	DDC1	Q08949	612 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	FCY22	Q12119	530 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	RGT2	Q12300	763 aa		2.3	□□□□□ -2.04
YMR31	YFR049W	CFT1	Q06632	1357 aa	Known RBP	2.29	□□□□□ -2.04
YMR31	YFR049W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.29	□□□□□ -2.04	not detected
YMR31	YFR049W	PRR1	P28708	518 aa		2.29	□□□□□ -2.04
YMR31	YFR049W	SPO23	P33757	523 aa		2.29	□□□□□ -2.04
YMR31	YFR049W	AVT5	P38176	459 aa		2.29	□□□□□ -2.04
YMR31	YFR049W	TCD1	P38756	429 aa		2.29	□□□□□ -2.04
YMR31	YFR049W	AGP3	P43548	558 aa		2.29	□□□□□ -2.04
YMR31	YFR049W	LSG1	P53145	640 aa	Known RBP	2.29	□□□□□ -2.04
YMR31	YFR049W	MTM1	P53320	366 aa		2.29	□□□□□ -2.04
YMR31	YFR049W	MSO1	P53604	210 aa	Known RBP	2.29	□□□□□ -2.04
YMR31	YFR049W	CWC25	P53854	179 aa	Known RBP	2.29	□□□□□ -2.04
YMR31	YFR049W	CRZ1	P53968	678 aa		2.29	□□□□□ -2.04
YMR31	YFR049W	REX2	P54964	269 aa	Known RBP	2.29	□□□□□ -2.04
YMR31	YFR049W	RTN1	Q04947	295 aa	Known RBP	2.29	□□□□□ -2.04
YMR31	YFR049W	CTS2	Q06350	511 aa		2.29	□□□□□ -2.04
YMR31	YFR049W	GRS2	Q06817	618 aa		2.29	□□□□□ -2.04
YMR31	YFR049W	ASR1	Q06834	288 aa		2.29	□□□□□ -2.04
YMR31	YFR049W	TSR1	Q07381	788 aa	Known RBP	2.29	□□□□□ -2.04
YMR31	YFR049W	YDL109C	Q12103	647 aa		2.29	□□□□□ -2.04
YMR31	YFR049W	YGK3	Q12222	375 aa	Predicted RBP	2.29	□□□□□ -2.04
YMR31	YFR049W	ICT1	Q12385	394 aa		2.29	□□□□□ -2.04
YMR31	YFR049W	ILV1	P00927	576 aa	Known RBP	2.28	□□□□□ -2.04
YMR31	YFR049W	HEM4	P06174	275 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	RPS14A	P06367	137 aa	Known RBP	2.28	□□□□□ -2.04
YMR31	YFR049W	RPS18A	P0CX55	146 aa	Known RBP	2.28	□□□□□ -2.04
YMR31	YFR049W	RPS18B	P0CX56	146 aa	Predicted RBP	2.28	□□□□□ -2.04
YMR31	YFR049W	SPS100	P13130	326 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	FRS2	P15625	503 aa	Known RBP	2.28	□□□□□ -2.04
YMR31	YFR049W	POL30	P15873	258 aa	Known RBP	2.28	□□□□□ -2.04
YMR31	YFR049W	ERD1	P16151	362 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	SDH3	P33421	198 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	MSN4	P33749	630 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.28	□□□□□ -2.04	not detected
YMR31	YFR049W	COS9	P36034	407 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	YKL071W	P36086	256 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	TAE1	P38340	232 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	YHR035W	P38769	630 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	RPS14B	P39516	138 aa	Known RBP	2.28	□□□□□ -2.04
YMR31	YFR049W	YNL208W	P40159	199 aa	Known RBP	2.28	□□□□□ -2.04
YMR31	YFR049W	SLM1	P40485	686 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	CIN2	P46670	268 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	TLG1	Q03322	224 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	YMR209C	Q03648	457 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	GAS2	Q06135	555 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	GMC2	Q06201	188 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	CMS1	Q07897	291 aa	Known RBP	2.28	□□□□□ -2.04
YMR31	YFR049W	ALE1	Q08548	619 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	APC9	Q12107	265 aa		2.28	□□□□□ -2.04
YMR31	YFR049W	POM33	Q12164	279 aa		2.28	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms