RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C UTP25P40498 721 aaKnown RBP11.86□□□□□ -0.51
PHO4YFR034C PFS2P42841 465 aaKnown RBP11.86□□□□□ -0.51
PHO4YFR034C IDS2P46958 469 aa11.86□□□□□ -0.51
PHO4YFR034C APS3P47064 194 aa11.86□□□□□ -0.51
PHO4YFR034C PGA1P53896 198 aa11.86□□□□□ -0.51
PHO4YFR034C YDR514CQ04408 483 aa11.86□□□□□ -0.51
PHO4YFR034C MFB1Q04922 465 aa11.86□□□□□ -0.51
PHO4YFR034C FRE5Q08908 694 aa11.86□□□□□ -0.51
PHO4YFR034C YBL113CQ7M4S9 792 aa11.86□□□□□ -0.51
PHO4YFR034C POL2P21951 2222 aaKnown RBP11.86□□□□□ -0.51
PHO4YFR034C PHO80P20052 293 aa11.85□□□□□ -0.51
PHO4YFR034C PRP28P23394 588 aa11.85□□□□□ -0.51
PHO4YFR034C PBN1P25580 416 aa11.85□□□□□ -0.51
PHO4YFR034C YHK8P38776 514 aa11.85□□□□□ -0.51
PHO4YFR034C FMC1P40491 155 aa11.85□□□□□ -0.51
PHO4YFR034C ICE2P40499 491 aa11.85□□□□□ -0.51
PHO4YFR034C SYO1Q07395 620 aa11.85□□□□□ -0.51
PHO4YFR034C BSC6Q08280 497 aa11.85□□□□□ -0.51
PHO4YFR034C RKM1Q08961 583 aaPredicted RBP11.85□□□□□ -0.51
PHO4YFR034C SKM1Q12469 655 aa11.85□□□□□ -0.51
PHO4YFR034C CYR1P08678 2026 aaKnown RBP11.84□□□□□ -0.51
PHO4YFR034C BAR1P12630 587 aa11.84□□□□□ -0.51
PHO4YFR034C ERD2P18414 219 aa11.84□□□□□ -0.51
PHO4YFR034C GPI12P23797 304 aa11.84□□□□□ -0.51
PHO4YFR034C HSP30P25619 332 aa11.84□□□□□ -0.51
PHO4YFR034C ZRT3P34240 503 aa11.84□□□□□ -0.51
PHO4YFR034C RSM22P36056 628 aa11.84□□□□□ -0.51
PHO4YFR034C YIL166CP40445 542 aa11.84□□□□□ -0.51
PHO4YFR034C ALK1P43633 760 aaKnown RBP11.84□□□□□ -0.51
PHO4YFR034C MDE1P47095 244 aa11.84□□□□□ -0.51
PHO4YFR034C YGL235WP53071 178 aa11.84□□□□□ -0.51
PHO4YFR034C DML1Q03652 475 aa11.84□□□□□ -0.51
PHO4YFR034C SPC19Q03954 165 aa11.84□□□□□ -0.51
PHO4YFR034C PEX10Q05568 337 aa11.84□□□□□ -0.51
PHO4YFR034C PEX27Q08580 376 aa11.84□□□□□ -0.51
PHO4YFR034C PSF1Q12488 208 aa11.84□□□□□ -0.51
PHO4YFR034C YGR161W-CQ3E744 92 aa11.84□□□□□ -0.51
PHO4YFR034C YEL009C-AA0A023PZF2 135 aa11.83□□□□□ -0.52
PHO4YFR034C SEC12P11655 471 aa11.83□□□□□ -0.52
PHO4YFR034C SAC7P17121 654 aa11.83□□□□□ -0.52
PHO4YFR034C YCR006CP25350 157 aa11.83□□□□□ -0.52
PHO4YFR034C DCG1P32460 244 aa11.83□□□□□ -0.52
PHO4YFR034C MDL1P33310 695 aa11.83□□□□□ -0.52
PHO4YFR034C UTH1P36135 365 aa11.83□□□□□ -0.52
PHO4YFR034C YBR063CP38083 404 aa11.83□□□□□ -0.52
PHO4YFR034C IPI1P38803 334 aaPredicted RBP11.83□□□□□ -0.52
PHO4YFR034C HRB1P38922 454 aaKnown RBP RIP-Chip data11.83□□□□□ -0.52not detected
PHO4YFR034C PAC1P39946 494 aaKnown RBP11.83□□□□□ -0.52
PHO4YFR034C GDS1P41913 522 aa11.83□□□□□ -0.52
PHO4YFR034C LEM3P42838 414 aa11.83□□□□□ -0.52
PHO4YFR034C SER2P42941 309 aa11.83□□□□□ -0.52
PHO4YFR034C BPL1P48445 690 aaPredicted RBP11.83□□□□□ -0.52
PHO4YFR034C TRM9P49957 279 aa11.83□□□□□ -0.52
PHO4YFR034C SNP1Q00916 300 aaPredicted RBP11.83□□□□□ -0.52
PHO4YFR034C SNT309Q06091 175 aaPredicted RBP11.83□□□□□ -0.52
PHO4YFR034C YOR289WQ12012 251 aaPredicted RBP11.83□□□□□ -0.52
PHO4YFR034C SUS1Q6WNK7 96 aa11.83□□□□□ -0.52
PHO4YFR034C DFG16Q99234 619 aa11.83□□□□□ -0.52
PHO4YFR034C RPL20AP0CX23 172 aaKnown RBP11.82□□□□□ -0.52
PHO4YFR034C RPL20BP0CX24 172 aaPredicted RBP11.82□□□□□ -0.52
PHO4YFR034C BUD23P25627 275 aaPredicted RBP11.82□□□□□ -0.52
PHO4YFR034C SNC1P31109 117 aa11.82□□□□□ -0.52
PHO4YFR034C IRC6P43615 237 aa11.82□□□□□ -0.52
PHO4YFR034C YJR141WP47172 347 aaPredicted RBP11.82□□□□□ -0.52
PHO4YFR034C NCE101Q02820 53 aa11.82□□□□□ -0.52
PHO4YFR034C NOG1Q02892 647 aaKnown RBP11.82□□□□□ -0.52
PHO4YFR034C SIZ1Q04195 904 aa11.82□□□□□ -0.52
PHO4YFR034C IPK1Q06667 281 aa11.82□□□□□ -0.52
PHO4YFR034C YOL114CQ12322 202 aa11.82□□□□□ -0.52
PHO4YFR034C YSF3P0C074 85 aaPredicted RBP11.81□□□□□ -0.52
PHO4YFR034C YGL041W-AP0C5N3 154 aa11.81□□□□□ -0.52
PHO4YFR034C FPS1P23900 669 aa11.81□□□□□ -0.52
PHO4YFR034C PTC6P25646 442 aa11.81□□□□□ -0.52
PHO4YFR034C TIM12P32830 109 aa11.81□□□□□ -0.52
PHO4YFR034C MTC2P34246 357 aa11.81□□□□□ -0.52
PHO4YFR034C TAF14P35189 244 aa11.81□□□□□ -0.52
PHO4YFR034C MBA1P38300 278 aa11.81□□□□□ -0.52
PHO4YFR034C CIN1P40987 1014 aa11.81□□□□□ -0.52
PHO4YFR034C MRH4P53166 561 aa11.81□□□□□ -0.52
PHO4YFR034C PLM2Q04383 521 aa11.81□□□□□ -0.52
PHO4YFR034C SNO4Q04902 237 aa11.81□□□□□ -0.52
PHO4YFR034C YPR127WQ06494 345 aa11.81□□□□□ -0.52
PHO4YFR034C HSP33Q08914 237 aaKnown RBP11.81□□□□□ -0.52
PHO4YFR034C HSP32Q08992 237 aa11.81□□□□□ -0.52
PHO4YFR034C TY1A-NL1Q12391 440 aaKnown RBP11.81□□□□□ -0.52
PHO4YFR034C NPC2Q12408 173 aa11.81□□□□□ -0.52
PHO4YFR034C SPT14P32363 452 aa11.8□□□□□ -0.52
PHO4YFR034C YEF1P32622 495 aa11.8□□□□□ -0.52
PHO4YFR034C JEN1P36035 616 aa11.8□□□□□ -0.52
PHO4YFR034C SRL3P36167 246 aa11.8□□□□□ -0.52
PHO4YFR034C VPS52P39904 641 aa11.8□□□□□ -0.52
PHO4YFR034C MIT1P40002 666 aa11.8□□□□□ -0.52
PHO4YFR034C YGR067CP53243 804 aa11.8□□□□□ -0.52
PHO4YFR034C YNR062CP53748 327 aa11.8□□□□□ -0.52
PHO4YFR034C YMR315WQ04869 349 aaKnown RBP11.8□□□□□ -0.52
PHO4YFR034C YDL176WQ12027 708 aa11.8□□□□□ -0.52
PHO4YFR034C YDL177CQ12257 170 aa11.8□□□□□ -0.52
PHO4YFR034C SIR2P06700 562 aa11.79□□□□□ -0.52
PHO4YFR034C PRE7P23724 241 aaKnown RBP11.79□□□□□ -0.52
PHO4YFR034C STP22P25604 385 aa11.79□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms