RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W EMI2Q04409 500 aaKnown RBP3.8□□□□□ -1.8
UBP6YFR010W ASR1Q06834 288 aa3.8□□□□□ -1.8
UBP6YFR010W TEN1Q07921 160 aa3.8□□□□□ -1.8
UBP6YFR010W YPL199CQ08954 240 aa3.8□□□□□ -1.8
UBP6YFR010W NSL1Q12143 216 aa3.8□□□□□ -1.8
UBP6YFR010W YER175W-AQ8TGU4 54 aa3.8□□□□□ -1.8
UBP6YFR010W URA6P15700 204 aa3.8□□□□□ -1.8
UBP6YFR010W RPB8P20436 146 aa3.8□□□□□ -1.8
UBP6YFR010W TRR1P29509 319 aaKnown RBP3.8□□□□□ -1.8
UBP6YFR010W CAM1P29547 415 aaKnown RBP3.8□□□□□ -1.8
UBP6YFR010W PRX1P34227 261 aaKnown RBP3.8□□□□□ -1.8
UBP6YFR010W SOR1P35497 357 aaKnown RBP3.8□□□□□ -1.8
UBP6YFR010W HES1P35843 434 aa3.8□□□□□ -1.8
UBP6YFR010W RPL32P38061 130 aaKnown RBP3.8□□□□□ -1.8
UBP6YFR010W PRS2P38620 318 aaKnown RBP3.8□□□□□ -1.8
UBP6YFR010W RRP4P38792 359 aaKnown RBP3.8□□□□□ -1.8
UBP6YFR010W YPS6P40583 537 aa3.8□□□□□ -1.8
UBP6YFR010W PHO86P46956 311 aa3.8□□□□□ -1.8
UBP6YFR010W YPT32P51996 222 aaKnown RBP3.8□□□□□ -1.8
UBP6YFR010W NBP35P52920 328 aa3.8□□□□□ -1.8
UBP6YFR010W YGL235WP53071 178 aa3.8□□□□□ -1.8
UBP6YFR010W YPR003CP53394 754 aa3.8□□□□□ -1.8
UBP6YFR010W YNR066CP53752 436 aa3.8□□□□□ -1.8
UBP6YFR010W SOR2Q07786 357 aa3.8□□□□□ -1.8
UBP6YFR010W PLB3Q08108 686 aa3.8□□□□□ -1.8
UBP6YFR010W RNH203Q12338 110 aa3.8□□□□□ -1.8
UBP6YFR010W RPN6Q12377 434 aa3.8□□□□□ -1.8
UBP6YFR010W RPO41P13433 1351 aaKnown RBP3.79□□□□□ -1.8
UBP6YFR010W COX1P00401 534 aa3.79□□□□□ -1.8
UBP6YFR010W ATP6P00854 259 aa3.79□□□□□ -1.8
UBP6YFR010W RPP0P05317 312 aaKnown RBP3.79□□□□□ -1.8
UBP6YFR010W COS2P0CX12 379 aa3.79□□□□□ -1.8
UBP6YFR010W COS3P0CX13 379 aa3.79□□□□□ -1.8
UBP6YFR010W NAM2P11325 894 aa3.79□□□□□ -1.8
UBP6YFR010W AMD2P22580 549 aa3.79□□□□□ -1.8
UBP6YFR010W AAT2P23542 418 aaKnown RBP3.79□□□□□ -1.8
UBP6YFR010W PTP1P25044 335 aa3.79□□□□□ -1.8
UBP6YFR010W POP5P28005 173 aa3.79□□□□□ -1.8
UBP6YFR010W ITR2P30606 609 aa3.79□□□□□ -1.8
UBP6YFR010W TMT1P32643 299 aa3.79□□□□□ -1.8
UBP6YFR010W MRX3P38172 270 aa3.79□□□□□ -1.8
UBP6YFR010W YBR053CP38235 358 aa3.79□□□□□ -1.8
UBP6YFR010W BDH1P39714 382 aa3.79□□□□□ -1.8
UBP6YFR010W YGR210CP42942 411 aa3.79□□□□□ -1.8
UBP6YFR010W PMT5P52867 743 aa3.79□□□□□ -1.8
UBP6YFR010W MGA1P53050 456 aa3.79□□□□□ -1.8
UBP6YFR010W CWC25P53854 179 aaKnown RBP3.79□□□□□ -1.8
UBP6YFR010W ERG13P54839 491 aaKnown RBP3.79□□□□□ -1.8
UBP6YFR010W SED5Q01590 340 aa3.79□□□□□ -1.8
UBP6YFR010W SMP3Q04174 516 aa3.79□□□□□ -1.8
UBP6YFR010W YOL159CQ08300 171 aa3.79□□□□□ -1.8
UBP6YFR010W SAM4Q08985 325 aaKnown RBP3.79□□□□□ -1.8
UBP6YFR010W SET6Q12529 373 aa3.79□□□□□ -1.8
UBP6YFR010W AI5_ALPHAQ9ZZX1 630 aa3.79□□□□□ -1.8
UBP6YFR010W RAV1P47104 1357 aa3.78□□□□□ -1.8
UBP6YFR010W HIS1P00498 297 aaKnown RBP3.78□□□□□ -1.8
UBP6YFR010W CHO1P08456 276 aa3.78□□□□□ -1.8
UBP6YFR010W SNF3P10870 884 aa3.78□□□□□ -1.8
UBP6YFR010W NHP6AP11632 93 aaKnown RBP3.78□□□□□ -1.8
UBP6YFR010W DPM1P14020 267 aaKnown RBP3.78□□□□□ -1.8
UBP6YFR010W DBF2P22204 572 aa3.78□□□□□ -1.8
UBP6YFR010W MXR2P25566 168 aa3.78□□□□□ -1.8
UBP6YFR010W FUB1P25659 250 aa3.78□□□□□ -1.8
UBP6YFR010W UBC8P28263 218 aa3.78□□□□□ -1.8
UBP6YFR010W EHD3P28817 500 aa3.78□□□□□ -1.8
UBP6YFR010W VMA5P31412 392 aaKnown RBP3.78□□□□□ -1.8
UBP6YFR010W MDH3P32419 343 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
UBP6YFR010W BCS1P32839 456 aa3.78□□□□□ -1.8
UBP6YFR010W SOF1P33750 489 aaKnown RBP3.78□□□□□ -1.8
UBP6YFR010W UPS2P35200 230 aa3.78□□□□□ -1.8
UBP6YFR010W DRE2P36152 348 aa3.78□□□□□ -1.8
UBP6YFR010W SHE3P38272 425 aaKnown RBP3.78□□□□□ -1.8
UBP6YFR010W SHG1P38337 142 aa3.78□□□□□ -1.8
UBP6YFR010W TSC10P38342 320 aa3.78□□□□□ -1.8
UBP6YFR010W LAS21P40367 830 aa3.78□□□□□ -1.8
UBP6YFR010W CIN2P46670 268 aa3.78□□□□□ -1.8
UBP6YFR010W MOG1P47123 218 aa3.78□□□□□ -1.8
UBP6YFR010W CCC1P47818 322 aa3.78□□□□□ -1.8
UBP6YFR010W MUP1P50276 574 aa3.78□□□□□ -1.8
UBP6YFR010W SEH1P53011 349 aaKnown RBP3.78□□□□□ -1.8
UBP6YFR010W ATG4P53867 494 aa3.78□□□□□ -1.8
UBP6YFR010W YPL068CQ02749 293 aa3.78□□□□□ -1.8
UBP6YFR010W SNO1Q03144 224 aa3.78□□□□□ -1.8
UBP6YFR010W NUP53Q03790 475 aa3.78□□□□□ -1.8
UBP6YFR010W TMN2Q04562 672 aa3.78□□□□□ -1.8
UBP6YFR010W DYN3Q04949 312 aa3.78□□□□□ -1.8
UBP6YFR010W FRE7Q12333 620 aa3.78□□□□□ -1.8
UBP6YFR010W RKM5Q12367 367 aa3.78□□□□□ -1.8
UBP6YFR010W SSC1P0CS90 654 aaKnown RBP3.77□□□□□ -1.81
UBP6YFR010W RPL12AP0CX53 165 aaKnown RBP3.77□□□□□ -1.81
UBP6YFR010W RPL12BP0CX54 165 aa3.77□□□□□ -1.81
UBP6YFR010W GCY1P14065 312 aaKnown RBP RIP-Chip data3.77□□□□□ -1.81not detected
UBP6YFR010W KGD2P19262 463 aaPredicted RBP3.77□□□□□ -1.81
UBP6YFR010W AIM17P23180 465 aaKnown RBP3.77□□□□□ -1.81
UBP6YFR010W CNE1P27825 502 aa3.77□□□□□ -1.81
UBP6YFR010W NUP2P32499 720 aa3.77□□□□□ -1.81
UBP6YFR010W CYS4P32582 507 aaKnown RBP3.77□□□□□ -1.81
UBP6YFR010W TIP20P33891 701 aa3.77□□□□□ -1.81
UBP6YFR010W BNA4P38169 460 aa3.77□□□□□ -1.81
UBP6YFR010W NPT1P39683 429 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 72.2 ms