RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W NRP1P32770 719 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
NIC96YFR002W YUH1P35127 236 aa2.01□□□□□ -2.09
NIC96YFR002W RRP1P35178 278 aaPredicted RBP2.01□□□□□ -2.09
NIC96YFR002W MRP21P38175 177 aa2.01□□□□□ -2.09
NIC96YFR002W SEC27P41811 889 aaKnown RBP2.01□□□□□ -2.09
NIC96YFR002W NUP84P52891 726 aa2.01□□□□□ -2.09
NIC96YFR002W PNC1P53184 216 aaKnown RBP2.01□□□□□ -2.09
NIC96YFR002W YPR078CQ06813 372 aa2.01□□□□□ -2.09
NIC96YFR002W IRC25Q07951 179 aa2.01□□□□□ -2.09
NIC96YFR002W SKI7Q08491 747 aaPredicted RBP2.01□□□□□ -2.09
NIC96YFR002W IKI3Q06706 1349 aaKnown RBP2.01□□□□□ -2.09
NIC96YFR002W PET18P25362 215 aa2□□□□□ -2.09
NIC96YFR002W CSE2P33308 149 aa2□□□□□ -2.09
NIC96YFR002W BUD2P33314 1104 aa2□□□□□ -2.09
NIC96YFR002W ATP3P38077 311 aaKnown RBP2□□□□□ -2.09
NIC96YFR002W OLA1P38219 394 aaKnown RBP2□□□□□ -2.09
NIC96YFR002W HSM3P38348 480 aa2□□□□□ -2.09
NIC96YFR002W GAB1P41733 394 aa2□□□□□ -2.09
NIC96YFR002W AZR1P50080 613 aa2□□□□□ -2.09
NIC96YFR002W RIB4P50861 169 aaPredicted RBP2□□□□□ -2.09
NIC96YFR002W PMT5P52867 743 aa2□□□□□ -2.09
NIC96YFR002W YGL185CP53100 379 aa2□□□□□ -2.09
NIC96YFR002W PIB2P53191 635 aa2□□□□□ -2.09
NIC96YFR002W RNH203Q12338 110 aa2□□□□□ -2.09
NIC96YFR002W IMA3P0CW40 589 aa2□□□□□ -2.09
NIC96YFR002W IMA4P0CW41 589 aa2□□□□□ -2.09
NIC96YFR002W HSP26P15992 214 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
NIC96YFR002W NUP2P32499 720 aa2□□□□□ -2.09
NIC96YFR002W SMC2P38989 1170 aaKnown RBP2□□□□□ -2.09
NIC96YFR002W JLP2P40206 208 aa2□□□□□ -2.09
NIC96YFR002W UTP18P40362 594 aaPredicted RBP2□□□□□ -2.09
NIC96YFR002W DBP6P53734 629 aaKnown RBP2□□□□□ -2.09
NIC96YFR002W GIP3Q03016 1276 aa2□□□□□ -2.09
NIC96YFR002W BET5Q03630 159 aa2□□□□□ -2.09
NIC96YFR002W NSE1Q07913 336 aa2□□□□□ -2.09
NIC96YFR002W IMA2Q08295 589 aa2□□□□□ -2.09
NIC96YFR002W SPO12P17123 173 aa1.99□□□□□ -2.09
NIC96YFR002W SWC5P38326 303 aa1.99□□□□□ -2.09
NIC96YFR002W INM1P38710 295 aa1.99□□□□□ -2.09
NIC96YFR002W PCF11P39081 626 aaPredicted RBP1.99□□□□□ -2.09
NIC96YFR002W PAC11P40960 533 aa1.99□□□□□ -2.09
NIC96YFR002W GPI15P53961 229 aa1.99□□□□□ -2.09
NIC96YFR002W SPO19Q03029 223 aa1.99□□□□□ -2.09
NIC96YFR002W YLR297WQ05899 129 aa1.99□□□□□ -2.09
NIC96YFR002W ECM7Q06200 448 aa1.99□□□□□ -2.09
NIC96YFR002W YRM1Q12340 786 aa1.99□□□□□ -2.09
NIC96YFR002W AIM45Q12480 344 aaKnown RBP1.99□□□□□ -2.09
NIC96YFR002W YIL002W-AQ3E7Z5 69 aa1.99□□□□□ -2.09
NIC96YFR002W RNR2P09938 399 aaKnown RBP1.99□□□□□ -2.09
NIC96YFR002W RPS16AP0CX51 143 aaKnown RBP1.99□□□□□ -2.09
NIC96YFR002W RPS16BP0CX52 143 aaKnown RBP1.99□□□□□ -2.09
NIC96YFR002W THR4P16120 514 aaKnown RBP1.99□□□□□ -2.09
NIC96YFR002W HXT2P23585 541 aa1.99□□□□□ -2.09
NIC96YFR002W YKL097CP34245 136 aa1.99□□□□□ -2.09
NIC96YFR002W TPO5P36029 618 aa1.99□□□□□ -2.09
NIC96YFR002W YKL070WP36087 169 aa1.99□□□□□ -2.09
NIC96YFR002W KAP104P38217 918 aaKnown RBP1.99□□□□□ -2.09
NIC96YFR002W YHR122WP38829 231 aa1.99□□□□□ -2.09
NIC96YFR002W AIM10P39965 576 aaKnown RBP1.99□□□□□ -2.09
NIC96YFR002W YJR085CP47131 105 aaKnown RBP1.99□□□□□ -2.09
NIC96YFR002W TOS2P50078 622 aa1.99□□□□□ -2.09
NIC96YFR002W RTT102P53330 157 aa1.99□□□□□ -2.09
NIC96YFR002W TAF12Q03761 539 aa1.99□□□□□ -2.09
NIC96YFR002W CAB5Q03941 241 aa1.99□□□□□ -2.09
NIC96YFR002W URH1Q04179 340 aa1.99□□□□□ -2.09
NIC96YFR002W URC2Q04411 772 aa1.99□□□□□ -2.09
NIC96YFR002W VAC14Q06708 880 aa1.99□□□□□ -2.09
NIC96YFR002W RUP1Q12242 671 aa1.99□□□□□ -2.09
NIC96YFR002W SAC3P46674 1301 aa1.99□□□□□ -2.09
NIC96YFR002W FLO11P08640 1367 aa1.99□□□□□ -2.09
NIC96YFR002W OPI3P05375 206 aa1.98□□□□□ -2.09
NIC96YFR002W CDC21P06785 304 aa1.98□□□□□ -2.09
NIC96YFR002W UNG1P12887 359 aa1.98□□□□□ -2.09
NIC96YFR002W CYS4P32582 507 aaKnown RBP1.98□□□□□ -2.09
NIC96YFR002W COY1P34237 679 aa1.98□□□□□ -2.09
NIC96YFR002W YAL037WP39728 267 aa1.98□□□□□ -2.09
NIC96YFR002W SCC4P40090 624 aa1.98□□□□□ -2.09
NIC96YFR002W PHB2P50085 310 aa1.98□□□□□ -2.09
NIC96YFR002W ERV41Q04651 352 aa1.98□□□□□ -2.09
NIC96YFR002W BCH1Q05029 724 aa1.98□□□□□ -2.09
NIC96YFR002W REX4Q08237 289 aa1.98□□□□□ -2.09
NIC96YFR002W LDB17Q12342 491 aa1.98□□□□□ -2.09
NIC96YFR002W TDH1P00360 332 aaKnown RBP1.98□□□□□ -2.09
NIC96YFR002W RPL12AP0CX53 165 aaKnown RBP1.98□□□□□ -2.09
NIC96YFR002W RPL12BP0CX54 165 aa1.98□□□□□ -2.09
NIC96YFR002W UGA1P17649 471 aa1.98□□□□□ -2.09
NIC96YFR002W YCL068CP25593 260 aa1.98□□□□□ -2.09
NIC96YFR002W CTM1P38818 585 aa1.98□□□□□ -2.09
NIC96YFR002W ALP1P38971 573 aa1.98□□□□□ -2.09
NIC96YFR002W YER079WP40052 210 aaKnown RBP1.98□□□□□ -2.09
NIC96YFR002W APJ1P53940 528 aa1.98□□□□□ -2.09
NIC96YFR002W RRG8Q06109 277 aa1.98□□□□□ -2.09
NIC96YFR002W PEX27Q08580 376 aa1.98□□□□□ -2.09
NIC96YFR002W PLP2Q12017 286 aa1.98□□□□□ -2.09
NIC96YFR002W SRL2Q12020 392 aa1.98□□□□□ -2.09
NIC96YFR002W YDR524C-BQ3E6R4 66 aa1.98□□□□□ -2.09
NIC96YFR002W SPO24Q3E752 67 aa1.98□□□□□ -2.09
NIC96YFR002W ECM29P38737 1868 aa1.98□□□□□ -2.09
NIC96YFR002W FAB1P34756 2278 aa1.98□□□□□ -2.09
NIC96YFR002W MAS1P10507 462 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms