RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C INA22P40576 216 aa1.13□□□□□ -2.23
SEC3YER008C AIM24P47127 394 aa1.13□□□□□ -2.23
SEC3YER008C SOL4P53315 255 aa1.13□□□□□ -2.23
SEC3YER008C TRM112P53738 135 aaPredicted RBP1.13□□□□□ -2.23
SEC3YER008C FRE4P53746 719 aa1.13□□□□□ -2.23
SEC3YER008C COS1P53822 381 aa1.13□□□□□ -2.23
SEC3YER008C CTF19Q02732 369 aa1.13□□□□□ -2.23
SEC3YER008C YMR209CQ03648 457 aa1.13□□□□□ -2.23
SEC3YER008C HSP31Q04432 237 aa1.13□□□□□ -2.23
SEC3YER008C IVY1Q04934 453 aa1.13□□□□□ -2.23
SEC3YER008C BCP1Q06338 283 aa1.13□□□□□ -2.23
SEC3YER008C SYO1Q07395 620 aa1.13□□□□□ -2.23
SEC3YER008C ORT1Q12375 292 aa1.13□□□□□ -2.23
SEC3YER008C DCP1Q12517 231 aaPredicted RBP1.13□□□□□ -2.23
SEC3YER008C YBL111CQ3E7Y5 667 aa1.13□□□□□ -2.23
SEC3YER008C YDR157WA0A023PZE8 133 aa1.13□□□□□ -2.23
SEC3YER008C RNR2P09938 399 aaKnown RBP1.13□□□□□ -2.23
SEC3YER008C MATALPHA2P0CY08 210 aa1.13□□□□□ -2.23
SEC3YER008C HMLALPHA2P0CY09 210 aa1.13□□□□□ -2.23
SEC3YER008C ACH1P32316 526 aa1.13□□□□□ -2.23
SEC3YER008C PTR2P32901 601 aa1.13□□□□□ -2.23
SEC3YER008C RIB1P38066 345 aa1.13□□□□□ -2.23
SEC3YER008C ATG12P38316 186 aa1.13□□□□□ -2.23
SEC3YER008C FAA2P39518 744 aa1.13□□□□□ -2.23
SEC3YER008C SPG5P42933 373 aa1.13□□□□□ -2.23
SEC3YER008C SSN8P47821 323 aa1.13□□□□□ -2.23
SEC3YER008C SCS3P53012 380 aa1.13□□□□□ -2.23
SEC3YER008C CDH1P53197 566 aa1.13□□□□□ -2.23
SEC3YER008C GIM3P53900 129 aa1.13□□□□□ -2.23
SEC3YER008C CTL1Q03220 320 aaKnown RBP1.13□□□□□ -2.23
SEC3YER008C MGR3Q04472 501 aa1.13□□□□□ -2.23
SEC3YER008C HEM2P05373 342 aa1.12□□□□□ -2.23
SEC3YER008C SUP35P05453 685 aaKnown RBP1.12□□□□□ -2.23
SEC3YER008C FRS2P15625 503 aaKnown RBP1.12□□□□□ -2.23
SEC3YER008C PRR1P28708 518 aa1.12□□□□□ -2.23
SEC3YER008C YKL023WP36103 277 aaKnown RBP1.12□□□□□ -2.23
SEC3YER008C ECM4P36156 370 aa1.12□□□□□ -2.23
SEC3YER008C YCR041WP37265 110 aa1.12□□□□□ -2.23
SEC3YER008C GPX2P38143 162 aa1.12□□□□□ -2.23
SEC3YER008C TAE1P38340 232 aa1.12□□□□□ -2.23
SEC3YER008C YHB1P39676 399 aaKnown RBP1.12□□□□□ -2.23
SEC3YER008C VEL1P53058 206 aa1.12□□□□□ -2.23
SEC3YER008C GPI15P53961 229 aa1.12□□□□□ -2.23
SEC3YER008C SLT2Q00772 484 aa1.12□□□□□ -2.23
SEC3YER008C RRN11Q04712 507 aa1.12□□□□□ -2.23
SEC3YER008C LDS2Q08218 356 aa1.12□□□□□ -2.23
SEC3YER008C YOL075CQ08234 1294 aa1.12□□□□□ -2.23
SEC3YER008C ALE1Q08548 619 aa1.12□□□□□ -2.23
SEC3YER008C YDR262WQ12331 272 aa1.12□□□□□ -2.23
SEC3YER008C LAA1P39526 2014 aa1.12□□□□□ -2.23
SEC3YER008C TDH2P00358 332 aaKnown RBP1.12□□□□□ -2.23
SEC3YER008C COX2P00410 251 aa1.12□□□□□ -2.23
SEC3YER008C CDC33P07260 213 aaKnown RBP1.12□□□□□ -2.23
SEC3YER008C YAR066WP0CX18 203 aa1.12□□□□□ -2.23
SEC3YER008C YHR214WP0CX19 203 aa1.12□□□□□ -2.23
SEC3YER008C CKA2P19454 339 aa1.12□□□□□ -2.23
SEC3YER008C SLM5P25345 492 aaKnown RBP1.12□□□□□ -2.23
SEC3YER008C BUB3P26449 341 aa1.12□□□□□ -2.23
SEC3YER008C SPS19P32573 292 aaKnown RBP1.12□□□□□ -2.23
SEC3YER008C PHD1P36093 366 aa1.12□□□□□ -2.23
SEC3YER008C RPC37P36121 282 aa1.12□□□□□ -2.23
SEC3YER008C YBR241CP38142 488 aa1.12□□□□□ -2.23
SEC3YER008C YBR062CP38239 180 aa1.12□□□□□ -2.23
SEC3YER008C YPC1P38298 316 aa1.12□□□□□ -2.23
SEC3YER008C EFM2P38347 419 aa1.12□□□□□ -2.23
SEC3YER008C YAT2P40017 923 aa1.12□□□□□ -2.23
SEC3YER008C YNL194CP40169 301 aa1.12□□□□□ -2.23
SEC3YER008C YPS6P40583 537 aa1.12□□□□□ -2.23
SEC3YER008C URB2P47108 1174 aa1.12□□□□□ -2.23
SEC3YER008C STE24P47154 453 aa1.12□□□□□ -2.23
SEC3YER008C MTM1P53320 366 aa1.12□□□□□ -2.23
SEC3YER008C ARK1P53974 638 aa1.12□□□□□ -2.23
SEC3YER008C SLD5Q03406 294 aa1.12□□□□□ -2.23
SEC3YER008C SEC13Q04491 297 aaKnown RBP1.12□□□□□ -2.23
SEC3YER008C TAZ1Q06510 381 aa1.12□□□□□ -2.23
SEC3YER008C TLG2Q08144 397 aa1.12□□□□□ -2.23
SEC3YER008C YLL056CQ12177 298 aa1.12□□□□□ -2.23
SEC3YER008C NBL1Q3E7Y6 73 aa1.12□□□□□ -2.23
SEC3YER008C THR4P16120 514 aaKnown RBP1.12□□□□□ -2.23
SEC3YER008C VPS3P23643 1011 aa1.12□□□□□ -2.23
SEC3YER008C CLB2P24869 491 aa1.12□□□□□ -2.23
SEC3YER008C CTR86P25355 563 aa1.12□□□□□ -2.23
SEC3YER008C ATO2P32907 282 aa1.12□□□□□ -2.23
SEC3YER008C MRPS5P33759 307 aa1.12□□□□□ -2.23
SEC3YER008C ECM15P35195 104 aa1.12□□□□□ -2.23
SEC3YER008C YJR011CP47086 261 aaPredicted RBP1.12□□□□□ -2.23
SEC3YER008C GPN3Q06543 272 aa1.12□□□□□ -2.23
SEC3YER008C SNF8Q12483 233 aa1.12□□□□□ -2.23
SEC3YER008C YCL012CQ8J0M4 134 aa1.12□□□□□ -2.23
SEC3YER008C SSK22P25390 1331 aaPredicted RBP1.12□□□□□ -2.23
SEC3YER008C RHO2P06781 192 aa1.12□□□□□ -2.23
SEC3YER008C MSS116P15424 664 aaKnown RBP1.12□□□□□ -2.23
SEC3YER008C MET16P18408 261 aaPredicted RBP1.12□□□□□ -2.23
SEC3YER008C EXO70P19658 623 aa1.12□□□□□ -2.23
SEC3YER008C FAR1P21268 830 aa1.12□□□□□ -2.23
SEC3YER008C PET18P25362 215 aa1.12□□□□□ -2.23
SEC3YER008C YKL071WP36086 256 aa1.12□□□□□ -2.23
SEC3YER008C YBR137WP38276 179 aa1.12□□□□□ -2.23
SEC3YER008C PFS1P38872 237 aa1.12□□□□□ -2.23
SEC3YER008C CCT4P39078 528 aaKnown RBP1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 72.2 ms