RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	SRO77	P38163	1010 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	YLF2	P38746	405 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	SBE22	P38814	852 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	NSG1	P38837	291 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	YHR219W	P38900	624 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	AST2	P39945	430 aa	Known RBP	5.9	□□□□□ -1.46
VMA3	YEL027W	CIN1	P40987	1014 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	IRC6	P43615	237 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	CHA4	P43634	648 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	IDS2	P46958	469 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	SLD3	P53135	668 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	LSG1	P53145	640 aa	Known RBP	5.9	□□□□□ -1.46
VMA3	YEL027W	ORM1	P53224	222 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	SNF12	P53628	566 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	ABZ2	Q03266	374 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	SKI7	Q08491	747 aa	Predicted RBP	5.9	□□□□□ -1.46
VMA3	YEL027W	FMP40	Q08968	688 aa	Predicted RBP	5.9	□□□□□ -1.46
VMA3	YEL027W	MDM32	Q12171	622 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	YOR032W-A	Q8TGS1	66 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	DET1	Q99288	334 aa	Known RBP	5.9	□□□□□ -1.46
VMA3	YEL027W	TAD3	Q9URQ3	322 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	YOL162W	P0CF19	215 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	DPB2	P24482	689 aa	Predicted RBP	5.89	□□□□□ -1.47
VMA3	YEL027W	YCR100C	P25606	316 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	SSZ1	P38788	538 aa	Known RBP	5.89	□□□□□ -1.47
VMA3	YEL027W	GPI16	P38875	610 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	EGD2	P38879	174 aa	Known RBP	5.89	□□□□□ -1.47
VMA3	YEL027W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.89	□□□□□ -1.47	not detected
VMA3	YEL027W	ALP1	P38971	573 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	RRG9	P40156	214 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	YNL195C	P40168	261 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	SOK1	P40317	901 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	YIL166C	P40445	542 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	SWP82	P43554	623 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	HMS2	P47175	358 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	COS1	P53822	381 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	RHO5	P53879	331 aa	Known RBP	5.89	□□□□□ -1.47
VMA3	YEL027W	ATG21	Q02887	496 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	TLG1	Q03322	224 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	RSN1	Q03516	953 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	YMD8	Q03697	442 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	ERB1	Q04660	807 aa	Known RBP	5.89	□□□□□ -1.47
VMA3	YEL027W	PAL1	Q05518	499 aa	Known RBP	5.89	□□□□□ -1.47
VMA3	YEL027W	DCR2	Q05924	578 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	YLR446W	Q06204	433 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	SYO1	Q07395	620 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	IES3	Q12345	250 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	NPC2	Q12408	173 aa		5.89	□□□□□ -1.47
VMA3	YEL027W	CAR2	P07991	424 aa	Known RBP	5.88	□□□□□ -1.47
VMA3	YEL027W	DPM1	P14020	267 aa	Known RBP	5.88	□□□□□ -1.47
VMA3	YEL027W	NCP1	P16603	691 aa	Known RBP	5.88	□□□□□ -1.47
VMA3	YEL027W	ERD2	P18414	219 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	SNF6	P18888	332 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	RPB10	P22139	70 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	SNC1	P31109	117 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	EMP70	P32802	667 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	ARC19	P33204	171 aa	Known RBP	5.88	□□□□□ -1.47
VMA3	YEL027W	YKL077W	P36081	392 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	YKR015C	P36111	568 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	RRP4	P38792	359 aa	Known RBP	5.88	□□□□□ -1.47
VMA3	YEL027W	IPT1	P38954	527 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	YJL193W	P39542	402 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	SOP4	P39543	234 aa	Predicted RBP	5.88	□□□□□ -1.47
VMA3	YEL027W	RPS26A	P39938	119 aa	Known RBP	5.88	□□□□□ -1.47
VMA3	YEL027W	RPS26B	P39939	119 aa	Known RBP	5.88	□□□□□ -1.47
VMA3	YEL027W	YEL057C	P39983	233 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	EXG2	P52911	562 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	YGL235W	P53071	178 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	YGL101W	P53144	215 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	CUZ1	P53899	274 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	YNL092W	P53934	400 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	TMA20	P89886	181 aa	Predicted RBP	5.88	□□□□□ -1.47
VMA3	YEL027W	CGI121	Q03705	181 aa	Known RBP	5.88	□□□□□ -1.47
VMA3	YEL027W	RSM24	Q03976	319 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	SEC13	Q04491	297 aa	Known RBP	5.88	□□□□□ -1.47
VMA3	YEL027W	YLR345W	Q06137	509 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	YDL177C	Q12257	170 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	PST2	Q12335	198 aa	Known RBP	5.88	□□□□□ -1.47
VMA3	YEL027W	DFG16	Q99234	619 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	MED11	Q99278	115 aa		5.88	□□□□□ -1.47
VMA3	YEL027W	GLT1	Q12680	2145 aa	Known RBP	5.87	□□□□□ -1.47
VMA3	YEL027W	ADE5,7	P07244	802 aa	Known RBP	5.87	□□□□□ -1.47
VMA3	YEL027W	SAM35	P14693	329 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	URE2	P23202	354 aa	Known RBP	5.87	□□□□□ -1.47
VMA3	YEL027W	CNA1	P23287	553 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	OAC1	P32332	324 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	HSP150	P32478	413 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	ARN2	P38724	620 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	GOS1	P38736	223 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	YTA6	P40328	754 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	RET2	P43621	546 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	MDE1	P47095	244 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	YJR098C	P47139	656 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	ATG4	P53867	494 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	TFB3	Q03290	321 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	SEI1	Q06058	285 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	YPR127W	Q06494	345 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	HNT3	Q08702	217 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	UIP4	Q08926	304 aa		5.87	□□□□□ -1.47
VMA3	YEL027W	MCP1	Q12106	302 aa		5.87	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 149.8 ms