RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	ARC19	P33204	171 aa	Known RBP	4.37	□□□□□ -1.71
SUP35	YDR172W	AUR1	P36107	401 aa	Predicted RBP	4.37	□□□□□ -1.71
SUP35	YDR172W	LYS1	P38998	373 aa	RIP-Chip data	4.37	□□□□□ -1.71	not detected
SUP35	YDR172W	RCY1	P39531	840 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	YAL037W	P39728	267 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	DDI1	P40087	428 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	YJL068C	P40363	299 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	TOS2	P50078	622 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	IMD4	P50094	524 aa	Known RBP	4.37	□□□□□ -1.71
SUP35	YDR172W	SWS2	P53937	143 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	REC102	Q02721	264 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	SKI7	Q08491	747 aa	Predicted RBP	4.37	□□□□□ -1.71
SUP35	YDR172W	PEX27	Q08580	376 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	RPL11B	Q3E757	174 aa	Predicted RBP	4.37	□□□□□ -1.71
SUP35	YDR172W	IRA2	P19158	3079 aa		4.37	□□□□□ -1.71
SUP35	YDR172W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
SUP35	YDR172W	FUR1	P18562	216 aa	Known RBP	4.36	□□□□□ -1.71
SUP35	YDR172W	YCR100C	P25606	316 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	BUB3	P26449	341 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	ACH1	P32316	526 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	SUI1	P32911	108 aa	Known RBP	4.36	□□□□□ -1.71
SUP35	YDR172W	YKL107W	P34251	309 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	CCZ1	P38273	704 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	RTC2	P38279	296 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	MDM31	P38880	579 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	ELO1	P39540	310 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	GID8	P40208	455 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	MPC1	P53157	130 aa	Known RBP	4.36	□□□□□ -1.71
SUP35	YDR172W	COS1	P53822	381 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	RHO3	Q00245	231 aa	Known RBP	4.36	□□□□□ -1.71
SUP35	YDR172W	EGD1	Q02642	157 aa	Known RBP	4.36	□□□□□ -1.71
SUP35	YDR172W	ABZ2	Q03266	374 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	THI73	Q07904	523 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	FRE5	Q08908	694 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	PUS9	Q12069	462 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	RPS21B	Q3E754	87 aa	Known RBP	4.36	□□□□□ -1.71
SUP35	YDR172W	GAL7	P08431	366 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	MGR1	P25573	417 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	ZRT3	P34240	503 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	RCN1	P36054	211 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	FMP23	P38231	175 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	EHT1	P38295	451 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	WSC4	P38739	605 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	YNL195C	P40168	261 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	MSE1	P48525	536 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	NUP57	P48837	541 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	MRH4	P53166	561 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	RBG2	P53295	368 aa	Known RBP	4.36	□□□□□ -1.71
SUP35	YDR172W	YGR250C	P53316	781 aa	Known RBP	4.36	□□□□□ -1.71
SUP35	YDR172W	YSA1	Q01976	231 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	YDR541C	Q03049	344 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	YMR087W	Q04299	284 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	NAT4	Q04751	285 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	VID22	Q05934	901 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	YPS7	Q06325	596 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	RKM1	Q08961	583 aa	Predicted RBP	4.36	□□□□□ -1.71
SUP35	YDR172W	LAG2	Q92325	660 aa		4.36	□□□□□ -1.71
SUP35	YDR172W	ERD1	P16151	362 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	THR1	P17423	357 aa	Known RBP	4.35	□□□□□ -1.71
SUP35	YDR172W	SNF6	P18888	332 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	PTP1	P25044	335 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	RNQ1	P25367	405 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	CHA1	P25379	360 aa	Known RBP	4.35	□□□□□ -1.71
SUP35	YDR172W	TAH1	P25638	111 aa	Predicted RBP	4.35	□□□□□ -1.71
SUP35	YDR172W	HIR2	P32480	875 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	SKN1	P33336	771 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	DOA1	P36037	715 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	ECM34	P38728	170 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	YHR035W	P38769	630 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	FCY21	P40039	528 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	LRO1	P40345	661 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	YJL218W	P40892	196 aa	Known RBP	4.35	□□□□□ -1.71
SUP35	YDR172W	SER2	P42941	309 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	PAM16	P42949	149 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	CIS3	P47001	227 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	MAL11	P53048	616 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	BUD17	P53727	317 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	YPL068C	Q02749	293 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	URC2	Q04411	772 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	YML053C	Q04978	212 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	PEX10	Q05568	337 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	YLR446W	Q06204	433 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	XYL2	Q07993	356 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	NBA1	Q08229	501 aa	Known RBP	4.35	□□□□□ -1.71
SUP35	YDR172W	SPC3	Q12133	184 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	YOL107W	Q12239	342 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	DFG16	Q99234	619 aa		4.35	□□□□□ -1.71
SUP35	YDR172W	ADE5,7	P07244	802 aa	Known RBP	4.34	□□□□□ -1.71
SUP35	YDR172W	YOL163W	P0CF20	169 aa		4.34	□□□□□ -1.71
SUP35	YDR172W	GCN3	P14741	305 aa		4.34	□□□□□ -1.71
SUP35	YDR172W	YJU2	P28320	278 aa	Predicted RBP	4.34	□□□□□ -1.71
SUP35	YDR172W	SSH4	P32343	579 aa		4.34	□□□□□ -1.71
SUP35	YDR172W	PTR2	P32901	601 aa		4.34	□□□□□ -1.71
SUP35	YDR172W	MNL1	P38888	796 aa		4.34	□□□□□ -1.71
SUP35	YDR172W	INP1	Q03694	420 aa		4.34	□□□□□ -1.71
SUP35	YDR172W	OST6	Q03723	332 aa		4.34	□□□□□ -1.71
SUP35	YDR172W	ELP6	Q04868	273 aa		4.34	□□□□□ -1.71
SUP35	YDR172W	YLR125W	Q12138	136 aa		4.34	□□□□□ -1.71
SUP35	YDR172W	YDR262W	Q12331	272 aa		4.34	□□□□□ -1.71
SUP35	YDR172W	RRP12	Q12754	1228 aa	Known RBP	4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 68.6 ms