RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	CRM1	P30822	1084 aa	Known RBP	3.9	□□□□□ -1.79
SLX1	YBR228W	SPR1	P32603	445 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	SDH3	P33421	198 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	RPS1A	P33442	255 aa	Known RBP	3.9	□□□□□ -1.79
SLX1	YBR228W	GIM4	P40005	111 aa	Known RBP	3.9	□□□□□ -1.79
SLX1	YBR228W	YER034W	P40022	185 aa	Known RBP	3.9	□□□□□ -1.79
SLX1	YBR228W	SHO1	P40073	367 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	COS4	P43542	379 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	AAD10	P47182	288 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	USE1	P53146	245 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	YGR015C	P53208	328 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	CUS2	P53830	285 aa	Predicted RBP	3.9	□□□□□ -1.79
SLX1	YBR228W	YNL010W	P53981	241 aa	Known RBP	3.9	□□□□□ -1.79
SLX1	YBR228W	REX2	P54964	269 aa	Known RBP	3.9	□□□□□ -1.79
SLX1	YBR228W	FAR10	Q06001	478 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.79	not detected
SLX1	YBR228W	PLB3	Q08108	686 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	ESA1	Q08649	445 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	YPL225W	Q08971	146 aa	Known RBP	3.9	□□□□□ -1.79
SLX1	YBR228W	SRO7	Q12038	1033 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	YDL009C	Q12210	107 aa		3.9	□□□□□ -1.79
SLX1	YBR228W	STE3	P06783	470 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	PMR1	P13586	950 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	BUD5	P25300	642 aa	Predicted RBP	3.89	□□□□□ -1.79
SLX1	YBR228W	GFD2	P25370	566 aa	Known RBP	3.89	□□□□□ -1.79
SLX1	YBR228W	YCR022C	P25620	114 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	COX13	P32799	129 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.89	□□□□□ -1.79	not detected
SLX1	YBR228W	PTC1	P35182	281 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	YBL029W	P38201	376 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	ICS2	P38284	255 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	INM1	P38710	295 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	YHR127W	P38833	243 aa	Known RBP	3.89	□□□□□ -1.79
SLX1	YBR228W	PCF11	P39081	626 aa	Predicted RBP	3.89	□□□□□ -1.79
SLX1	YBR228W	FRT2	P39734	528 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	MET18	P40469	1032 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	SEC27	P41811	889 aa	Known RBP	3.89	□□□□□ -1.79
SLX1	YBR228W	GCD10	P41814	478 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	YJR149W	P47177	404 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	YPT32	P51996	222 aa	Known RBP	3.89	□□□□□ -1.79
SLX1	YBR228W	MPS2	P53159	387 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	YET2	Q04210	160 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	YMR111C	Q04461	462 aa	Predicted RBP	3.89	□□□□□ -1.79
SLX1	YBR228W	SPC24	Q04477	213 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	SYO1	Q07395	620 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	YDL121C	Q07541	149 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	YDR056C	Q12025	205 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	RRP42	Q12277	265 aa	Predicted RBP	3.89	□□□□□ -1.79
SLX1	YBR228W	ATG34	Q12292	412 aa		3.89	□□□□□ -1.79
SLX1	YBR228W	RRP36	Q12481	300 aa	Predicted RBP	3.89	□□□□□ -1.79
SLX1	YBR228W	COX3	P00420	269 aa		3.88	□□□□□ -1.79
SLX1	YBR228W	RNA1	P11745	407 aa	Known RBP	3.88	□□□□□ -1.79
SLX1	YBR228W	ATR1	P13090	542 aa		3.88	□□□□□ -1.79
SLX1	YBR228W	SCL1	P21243	252 aa	Known RBP	3.88	□□□□□ -1.79
SLX1	YBR228W	DBR1	P24309	405 aa	Known RBP	3.88	□□□□□ -1.79
SLX1	YBR228W	MGM101	P32787	269 aa	Known RBP	3.88	□□□□□ -1.79
SLX1	YBR228W	MRPL37	P36532	105 aa		3.88	□□□□□ -1.79
SLX1	YBR228W	YPT35	P38815	214 aa	Known RBP	3.88	□□□□□ -1.79
SLX1	YBR228W	AXL2	P38928	823 aa		3.88	□□□□□ -1.79
SLX1	YBR228W	YJR030C	P47101	745 aa		3.88	□□□□□ -1.79
SLX1	YBR228W	MDM34	P53083	459 aa		3.88	□□□□□ -1.79
SLX1	YBR228W	RBG2	P53295	368 aa	Known RBP	3.88	□□□□□ -1.79
SLX1	YBR228W	YNL260C	P53846	198 aa		3.88	□□□□□ -1.79
SLX1	YBR228W	VHS1	Q03785	461 aa		3.88	□□□□□ -1.79
SLX1	YBR228W	YPR202W	Q08993	238 aa		3.88	□□□□□ -1.79
SLX1	YBR228W	ATG29	Q12092	213 aa		3.88	□□□□□ -1.79
SLX1	YBR228W	HUA2	Q12134	243 aa		3.88	□□□□□ -1.79
SLX1	YBR228W	YPL245W	Q12179	454 aa	Known RBP	3.88	□□□□□ -1.79
SLX1	YBR228W	YPR011C	Q12251	326 aa		3.88	□□□□□ -1.79
SLX1	YBR228W	SRN2	Q99176	213 aa		3.88	□□□□□ -1.79
SLX1	YBR228W	HSH49	Q99181	213 aa	Predicted RBP	3.88	□□□□□ -1.79
SLX1	YBR228W	YOL087C	Q99247	1116 aa		3.88	□□□□□ -1.79
SLX1	YBR228W	DST1	P07273	309 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	ARD1	P07347	238 aa	Predicted RBP	3.87	□□□□□ -1.79
SLX1	YBR228W	OCA4	P25366	362 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	IMG1	P25626	169 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	SSH4	P32343	579 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	SSE1	P32589	693 aa	Known RBP	3.87	□□□□□ -1.79
SLX1	YBR228W	TFB1	P32776	642 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	CAF4	P36130	643 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	BMT2	P38278	337 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	TRM5	P38793	499 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	NDE1	P40215	560 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	SSU1	P41930	458 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	ZIM17	P42844	174 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	NAS6	P50086	228 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	SWS2	P53937	143 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	PRP38	Q00723	242 aa	Predicted RBP	3.87	□□□□□ -1.79
SLX1	YBR228W	TRM82	Q03774	444 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	YDR124W	Q04608	324 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	MRPL51	Q06090	140 aa	Predicted RBP	3.87	□□□□□ -1.79
SLX1	YBR228W	YLR413W	Q06689	675 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	SGT1	Q08446	395 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	RPN8	Q08723	338 aa	Known RBP	3.87	□□□□□ -1.79
SLX1	YBR228W	SLF1	Q12034	447 aa	Known RBP	3.87	□□□□□ -1.79
SLX1	YBR228W	MHT1	Q12525	324 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	YCL012C	Q8J0M4	134 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	SAS5	Q99314	248 aa		3.87	□□□□□ -1.79
SLX1	YBR228W	CYR1	P08678	2026 aa	Known RBP	3.87	□□□□□ -1.79
SLX1	YBR228W	BRR2	P32639	2163 aa	Known RBP	3.86	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 248.7 ms