RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C CIN4P39110 191 aa5.24□□□□□ -1.57
PDB1YBR221C ELO1P39540 310 aa5.24□□□□□ -1.57
PDB1YBR221C COX15P40086 486 aa5.24□□□□□ -1.57
PDB1YBR221C VRG4P40107 337 aa5.24□□□□□ -1.57
PDB1YBR221C COA1P40452 197 aa5.24□□□□□ -1.57
PDB1YBR221C IRC24P40580 263 aa5.24□□□□□ -1.57
PDB1YBR221C YGR168CP53293 376 aa5.24□□□□□ -1.57
PDB1YBR221C GOR1P53839 350 aa5.24□□□□□ -1.57
PDB1YBR221C YDR248CQ03786 193 aa5.24□□□□□ -1.57
PDB1YBR221C COQ9Q05779 260 aa5.24□□□□□ -1.57
PDB1YBR221C BER1Q06688 274 aaKnown RBP5.24□□□□□ -1.57
PDB1YBR221C IRC10Q08118 586 aa5.24□□□□□ -1.57
PDB1YBR221C YOR289WQ12012 251 aaPredicted RBP5.24□□□□□ -1.57
PDB1YBR221C WTM1Q12363 437 aaKnown RBP5.24□□□□□ -1.57
PDB1YBR221C AIM45Q12480 344 aaKnown RBP5.24□□□□□ -1.57
PDB1YBR221C SNF8Q12483 233 aa5.24□□□□□ -1.57
PDB1YBR221C ECM29P38737 1868 aa5.24□□□□□ -1.57
PDB1YBR221C PDR18P53756 1333 aa5.23□□□□□ -1.57
PDB1YBR221C YLR415CO13578 112 aa5.23□□□□□ -1.57
PDB1YBR221C SIR3P06701 978 aa5.23□□□□□ -1.57
PDB1YBR221C CUP1-1P0CX80 61 aa5.23□□□□□ -1.57
PDB1YBR221C CUP1-2P0CX81 61 aa5.23□□□□□ -1.57
PDB1YBR221C CNA1P23287 553 aa5.23□□□□□ -1.57
PDB1YBR221C MBR1P23493 339 aa5.23□□□□□ -1.57
PDB1YBR221C YSP3P25036 478 aa5.23□□□□□ -1.57
PDB1YBR221C GBP2P25555 427 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
PDB1YBR221C RFA3P26755 122 aaKnown RBP5.23□□□□□ -1.57
PDB1YBR221C RRN10P38204 145 aa5.23□□□□□ -1.57
PDB1YBR221C ECM8P38246 354 aa5.23□□□□□ -1.57
PDB1YBR221C DER1P38307 211 aa5.23□□□□□ -1.57
PDB1YBR221C SSH1P38353 490 aaKnown RBP5.23□□□□□ -1.57
PDB1YBR221C CYC2P38909 366 aa5.23□□□□□ -1.57
PDB1YBR221C HMF1P40037 129 aaKnown RBP5.23□□□□□ -1.57
PDB1YBR221C GAT2P40209 560 aa5.23□□□□□ -1.57
PDB1YBR221C BAP3P41815 604 aa5.23□□□□□ -1.57
PDB1YBR221C YJR141WP47172 347 aaPredicted RBP5.23□□□□□ -1.57
PDB1YBR221C SBH2P52871 88 aa5.23□□□□□ -1.57
PDB1YBR221C COG2P53271 262 aa5.23□□□□□ -1.57
PDB1YBR221C RCF2P53721 224 aa5.23□□□□□ -1.57
PDB1YBR221C ARO80Q04052 950 aa5.23□□□□□ -1.57
PDB1YBR221C SUE1Q06524 206 aa5.23□□□□□ -1.57
PDB1YBR221C NDE2Q07500 545 aa5.23□□□□□ -1.57
PDB1YBR221C YOL019WQ08157 551 aa5.23□□□□□ -1.57
PDB1YBR221C YER175W-AQ8TGU4 54 aa5.23□□□□□ -1.57
PDB1YBR221C IRA2P19158 3079 aa5.23□□□□□ -1.57
PDB1YBR221C RAD50P12753 1312 aa5.23□□□□□ -1.57
PDB1YBR221C UBR2Q07963 1872 aa5.22□□□□□ -1.57
PDB1YBR221C YDR157WA0A023PZE8 133 aa5.22□□□□□ -1.57
PDB1YBR221C APL1P27351 700 aa5.22□□□□□ -1.57
PDB1YBR221C GAR1P28007 205 aaKnown RBP5.22□□□□□ -1.57
PDB1YBR221C LOS1P33418 1100 aaPredicted RBP5.22□□□□□ -1.57
PDB1YBR221C SOF1P33750 489 aaKnown RBP5.22□□□□□ -1.57
PDB1YBR221C MCH2P36032 473 aa5.22□□□□□ -1.57
PDB1YBR221C YKL162CP36052 402 aa5.22□□□□□ -1.57
PDB1YBR221C DRE2P36152 348 aa5.22□□□□□ -1.57
PDB1YBR221C INM1P38710 295 aa5.22□□□□□ -1.57
PDB1YBR221C IKI1P38874 309 aa5.22□□□□□ -1.57
PDB1YBR221C SEN34P39707 275 aa5.22□□□□□ -1.57
PDB1YBR221C ECM10P39987 644 aa5.22□□□□□ -1.57
PDB1YBR221C PCI8P40512 444 aa5.22□□□□□ -1.57
PDB1YBR221C TED1P40533 473 aa5.22□□□□□ -1.57
PDB1YBR221C UFE1P41834 346 aa5.22□□□□□ -1.57
PDB1YBR221C PRM10P42946 383 aa5.22□□□□□ -1.57
PDB1YBR221C YPT32P51996 222 aaKnown RBP5.22□□□□□ -1.57
PDB1YBR221C CWC25P53854 179 aaKnown RBP5.22□□□□□ -1.57
PDB1YBR221C YMR087WQ04299 284 aa5.22□□□□□ -1.57
PDB1YBR221C MDM30Q05930 598 aa5.22□□□□□ -1.57
PDB1YBR221C MRI1Q06489 411 aaKnown RBP5.22□□□□□ -1.57
PDB1YBR221C YPL199CQ08954 240 aa5.22□□□□□ -1.57
PDB1YBR221C SAM4Q08985 325 aaKnown RBP5.22□□□□□ -1.57
PDB1YBR221C TMS1Q12116 473 aa5.22□□□□□ -1.57
PDB1YBR221C FSH3Q99369 266 aa5.22□□□□□ -1.57
PDB1YBR221C RPP2AP05319 106 aaKnown RBP5.21□□□□□ -1.58
PDB1YBR221C PUT1P09368 476 aa5.21□□□□□ -1.58
PDB1YBR221C ATP10P18496 279 aa5.21□□□□□ -1.58
PDB1YBR221C RPB8P20436 146 aa5.21□□□□□ -1.58
PDB1YBR221C TRR1P29509 319 aaKnown RBP5.21□□□□□ -1.58
PDB1YBR221C IES6P32617 166 aa5.21□□□□□ -1.58
PDB1YBR221C TVP38P36164 337 aa5.21□□□□□ -1.58
PDB1YBR221C RPL32P38061 130 aaKnown RBP5.21□□□□□ -1.58
PDB1YBR221C RFC5P38251 354 aa5.21□□□□□ -1.58
PDB1YBR221C SHG1P38337 142 aa5.21□□□□□ -1.58
PDB1YBR221C SDH8P38345 138 aa5.21□□□□□ -1.58
PDB1YBR221C NDT80P38830 627 aa5.21□□□□□ -1.58
PDB1YBR221C CCT4P39078 528 aaKnown RBP5.21□□□□□ -1.58
PDB1YBR221C CEM1P39525 442 aa5.21□□□□□ -1.58
PDB1YBR221C MMF1P40185 145 aaKnown RBP5.21□□□□□ -1.58
PDB1YBR221C MSY1P48527 492 aa5.21□□□□□ -1.58
PDB1YBR221C MTL1P53214 551 aa5.21□□□□□ -1.58
PDB1YBR221C NQM1P53228 333 aaPredicted RBP5.21□□□□□ -1.58
PDB1YBR221C BIO4P53630 237 aa5.21□□□□□ -1.58
PDB1YBR221C YLR460CP54007 376 aa5.21□□□□□ -1.58
PDB1YBR221C SLG1P54867 378 aa5.21□□□□□ -1.58
PDB1YBR221C DXO1Q06349 442 aa5.21□□□□□ -1.58
PDB1YBR221C TEN1Q07921 160 aa5.21□□□□□ -1.58
PDB1YBR221C YPL150WQ12152 901 aa5.21□□□□□ -1.58
PDB1YBR221C FRE7Q12333 620 aa5.21□□□□□ -1.58
PDB1YBR221C HRP1Q99383 534 aaKnown RBP5.21□□□□□ -1.58
PDB1YBR221C HIS1P00498 297 aaKnown RBP5.2□□□□□ -1.58
PDB1YBR221C COR1P07256 457 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms