RNA–Protein interactions for RNA: YBL058W

SHP1, Transcript of UBX (ubiquitin regulatory X) domain-containing protein, yeastyeast

Gene SHP1, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHP1YBL058W ARF3P40994 183 aaRIP-Chip data5.2□□□□□ -1.58not detected
SHP1YBL058W RNR4P49723 345 aaKnown RBP5.2□□□□□ -1.58
SHP1YBL058W TOS2P50078 622 aa5.2□□□□□ -1.58
SHP1YBL058W COX20Q04935 205 aa5.2□□□□□ -1.58
SHP1YBL058W RDL2Q08742 149 aaKnown RBP5.2□□□□□ -1.58
SHP1YBL058W ALG6Q12001 544 aaKnown RBP5.2□□□□□ -1.58
SHP1YBL058W ARG3P05150 338 aa5.19□□□□□ -1.58
SHP1YBL058W PUT2P07275 575 aa5.19□□□□□ -1.58
SHP1YBL058W SAN1P22470 610 aa5.19□□□□□ -1.58
SHP1YBL058W SCO1P23833 295 aa5.19□□□□□ -1.58
SHP1YBL058W CLB3P24870 427 aa5.19□□□□□ -1.58
SHP1YBL058W GFD2P25370 566 aaKnown RBP5.19□□□□□ -1.58
SHP1YBL058W DUT1P33317 147 aa5.19□□□□□ -1.58
SHP1YBL058W YKL069WP36088 180 aa5.19□□□□□ -1.58
SHP1YBL058W ZTA1P38230 334 aaKnown RBP5.19□□□□□ -1.58
SHP1YBL058W AMN1P38285 549 aaPredicted RBP5.19□□□□□ -1.58
SHP1YBL058W SKN7P38889 622 aa5.19□□□□□ -1.58
SHP1YBL058W GDS1P41913 522 aa5.19□□□□□ -1.58
SHP1YBL058W NIT2P47016 307 aa5.19□□□□□ -1.58
SHP1YBL058W TOM22P49334 152 aa5.19□□□□□ -1.58
SHP1YBL058W MRPL19P53875 158 aa5.19□□□□□ -1.58
SHP1YBL058W YML119WQ03208 357 aa5.19□□□□□ -1.58
SHP1YBL058W COQ11Q05892 277 aa5.19□□□□□ -1.58
SHP1YBL058W ARV1Q06541 321 aa5.19□□□□□ -1.58
SHP1YBL058W ENB1Q08299 606 aa5.19□□□□□ -1.58
SHP1YBL058W MCP1Q12106 302 aa5.19□□□□□ -1.58
SHP1YBL058W RHO1P06780 209 aaKnown RBP5.18□□□□□ -1.58
SHP1YBL058W RAD14P28519 371 aa5.18□□□□□ -1.58
SHP1YBL058W CYS4P32582 507 aaKnown RBP5.18□□□□□ -1.58
SHP1YBL058W YKL107WP34251 309 aa5.18□□□□□ -1.58
SHP1YBL058W MAE1P36013 669 aaKnown RBP5.18□□□□□ -1.58
SHP1YBL058W YHR180WP38868 163 aa5.18□□□□□ -1.58
SHP1YBL058W COG3P40094 801 aa5.18□□□□□ -1.58
SHP1YBL058W YNL195CP40168 261 aa5.18□□□□□ -1.58
SHP1YBL058W PRE6P40303 254 aaKnown RBP5.18□□□□□ -1.58
SHP1YBL058W IDP2P41939 412 aa5.18□□□□□ -1.58
SHP1YBL058W SLS1P42900 643 aa5.18□□□□□ -1.58
SHP1YBL058W BUD9P53226 547 aa5.18□□□□□ -1.58
SHP1YBL058W MTQ1P53944 314 aa5.18□□□□□ -1.58
SHP1YBL058W ACS1Q01574 713 aa5.18□□□□□ -1.58
SHP1YBL058W LGE1Q02796 332 aaKnown RBP5.18□□□□□ -1.58
SHP1YBL058W MMT1Q03218 510 aa5.18□□□□□ -1.58
SHP1YBL058W YLR040CQ07988 224 aa5.18□□□□□ -1.58
SHP1YBL058W DET1Q99288 334 aaKnown RBP5.18□□□□□ -1.58
SHP1YBL058W ERS1P17261 260 aa5.17□□□□□ -1.58
SHP1YBL058W HIS7P33734 552 aaKnown RBP5.17□□□□□ -1.58
SHP1YBL058W CHK1P38147 527 aa5.17□□□□□ -1.58
SHP1YBL058W TSC10P38342 320 aa5.17□□□□□ -1.58
SHP1YBL058W RCK1P38622 512 aa5.17□□□□□ -1.58
SHP1YBL058W YAR028WP39548 234 aa5.17□□□□□ -1.58
SHP1YBL058W RFC4P40339 323 aaKnown RBP5.17□□□□□ -1.58
SHP1YBL058W TDA10P42938 290 aa5.17□□□□□ -1.58
SHP1YBL058W QRI1P43123 477 aaKnown RBP5.17□□□□□ -1.58
SHP1YBL058W PCP1P53259 346 aa5.17□□□□□ -1.58
SHP1YBL058W TEX1P53851 422 aaKnown RBP5.17□□□□□ -1.58
SHP1YBL058W UTP21Q06078 939 aaPredicted RBP5.17□□□□□ -1.58
SHP1YBL058W YDL180WQ12301 547 aa5.17□□□□□ -1.58
SHP1YBL058W YPT6Q99260 215 aa5.17□□□□□ -1.58
SHP1YBL058W MF(ALPHA)1P01149 165 aa5.16□□□□□ -1.58
SHP1YBL058W RPS1BP23248 255 aaKnown RBP5.16□□□□□ -1.58
SHP1YBL058W SIP2P34164 415 aaKnown RBP5.16□□□□□ -1.58
SHP1YBL058W COS9P36034 407 aa5.16□□□□□ -1.58
SHP1YBL058W FET3P38993 636 aa5.16□□□□□ -1.58
SHP1YBL058W MNN9P39107 395 aaKnown RBP5.16□□□□□ -1.58
SHP1YBL058W YIL012WP40551 113 aa5.16□□□□□ -1.58
SHP1YBL058W CCT7P42943 550 aaKnown RBP5.16□□□□□ -1.58
SHP1YBL058W ADO1P47143 340 aaKnown RBP5.16□□□□□ -1.58
SHP1YBL058W DAM1P53267 343 aa5.16□□□□□ -1.58
SHP1YBL058W YGR126WP53274 230 aa5.16□□□□□ -1.58
SHP1YBL058W ARC35P53731 342 aaKnown RBP5.16□□□□□ -1.58
SHP1YBL058W RNT1Q02555 471 aa5.16□□□□□ -1.58
SHP1YBL058W RSC9Q03124 581 aa5.16□□□□□ -1.58
SHP1YBL058W FMN1Q03778 218 aa5.16□□□□□ -1.58
SHP1YBL058W RNH1Q04740 348 aa5.16□□□□□ -1.58
SHP1YBL058W BRX1Q08235 291 aaKnown RBP5.16□□□□□ -1.58
SHP1YBL058W GEP5Q12393 293 aa5.16□□□□□ -1.58
SHP1YBL058W SET6Q12529 373 aa5.16□□□□□ -1.58
SHP1YBL058W YAL064W-BO13512 126 aa5.15□□□□□ -1.59
SHP1YBL058W TOP3P13099 656 aa5.15□□□□□ -1.59
SHP1YBL058W ERD2P18414 219 aa5.15□□□□□ -1.59
SHP1YBL058W DEP1P31385 405 aa5.15□□□□□ -1.59
SHP1YBL058W ROT2P38138 954 aa5.15□□□□□ -1.59
SHP1YBL058W YBR184WP38299 523 aa5.15□□□□□ -1.59
SHP1YBL058W TSL1P38427 1098 aaKnown RBP5.15□□□□□ -1.59
SHP1YBL058W BIG1P38813 335 aa5.15□□□□□ -1.59
SHP1YBL058W MSS4P38994 779 aa5.15□□□□□ -1.59
SHP1YBL058W SYF2P53277 215 aaPredicted RBP5.15□□□□□ -1.59
SHP1YBL058W ELA1P53861 379 aaPredicted RBP5.15□□□□□ -1.59
SHP1YBL058W MRP51Q02950 344 aa5.15□□□□□ -1.59
SHP1YBL058W SHE9Q04172 456 aa5.15□□□□□ -1.59
SHP1YBL058W RAD33Q04231 177 aa5.15□□□□□ -1.59
SHP1YBL058W VBA4Q04602 768 aaKnown RBP5.15□□□□□ -1.59
SHP1YBL058W NOP12Q08208 459 aaKnown RBP5.15□□□□□ -1.59
SHP1YBL058W BTS1Q12051 335 aa5.15□□□□□ -1.59
SHP1YBL058W YDL109CQ12103 647 aa5.15□□□□□ -1.59
SHP1YBL058W YKL068W-AQ3E826 78 aa5.15□□□□□ -1.59
SHP1YBL058W MHF1Q3E835 90 aa5.15□□□□□ -1.59
SHP1YBL058W RPL15AP05748 204 aaKnown RBP5.14□□□□□ -1.59
SHP1YBL058W HEM13P11353 328 aaKnown RBP5.14□□□□□ -1.59
SHP1YBL058W ITR1P30605 584 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms