RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C CCE1Q03702 353 aa1.12□□□□□ -2.23
YAR009CYAR009C MRPL35Q06678 367 aa1.12□□□□□ -2.23
YAR009CYAR009C VPS68Q12016 184 aa1.12□□□□□ -2.23
YAR009CYAR009C SPO12P17123 173 aa1.12□□□□□ -2.23
YAR009CYAR009C RRT12P25381 491 aa1.12□□□□□ -2.23
YAR009CYAR009C ERV1P27882 189 aa1.12□□□□□ -2.23
YAR009CYAR009C PMT2P31382 759 aa1.12□□□□□ -2.23
YAR009CYAR009C MRPL4P36517 319 aa1.12□□□□□ -2.23
YAR009CYAR009C RRP4P38792 359 aaKnown RBP1.12□□□□□ -2.23
YAR009CYAR009C PRE5P40302 234 aaKnown RBP1.12□□□□□ -2.23
YAR009CYAR009C GLG2P47011 380 aa1.12□□□□□ -2.23
YAR009CYAR009C VEL1P53058 206 aa1.12□□□□□ -2.23
YAR009CYAR009C MTM1P53320 366 aa1.12□□□□□ -2.23
YAR009CYAR009C REX3Q12090 404 aa1.12□□□□□ -2.23
YAR009CYAR009C ADH2P00331 348 aaKnown RBP1.11□□□□□ -2.23
YAR009CYAR009C TRP1P00912 224 aa1.11□□□□□ -2.23
YAR009CYAR009C RVS161P25343 265 aaKnown RBP1.11□□□□□ -2.23
YAR009CYAR009C MRPL15P36523 253 aa1.11□□□□□ -2.23
YAR009CYAR009C YBR056WP38081 501 aa1.11□□□□□ -2.23
YAR009CYAR009C SWD3P38123 315 aa1.11□□□□□ -2.23
YAR009CYAR009C SLM4P38247 162 aa1.11□□□□□ -2.23
YAR009CYAR009C YBR137WP38276 179 aa1.11□□□□□ -2.23
YAR009CYAR009C RRT2P38332 387 aa1.11□□□□□ -2.23
YAR009CYAR009C GPI16P38875 610 aa1.11□□□□□ -2.23
YAR009CYAR009C ZIM17P42844 174 aa1.11□□□□□ -2.23
YAR009CYAR009C RHO5P53879 331 aaKnown RBP1.11□□□□□ -2.23
YAR009CYAR009C OCA2P53949 197 aa1.11□□□□□ -2.23
YAR009CYAR009C SPP2Q02521 185 aa1.11□□□□□ -2.23
YAR009CYAR009C MZM1Q03429 123 aaPredicted RBP1.11□□□□□ -2.23
YAR009CYAR009C YRM1Q12340 786 aa1.11□□□□□ -2.23
YAR009CYAR009C MTR10Q99189 972 aa1.11□□□□□ -2.23
YAR009CYAR009C CPR2P23285 205 aa1.11□□□□□ -2.23
YAR009CYAR009C MNE1P24720 663 aa1.11□□□□□ -2.23
YAR009CYAR009C KAR9P32526 644 aa1.11□□□□□ -2.23
YAR009CYAR009C MSG5P38590 489 aa1.11□□□□□ -2.23
YAR009CYAR009C SIP3P38717 1229 aa1.11□□□□□ -2.23
YAR009CYAR009C SFH5P47008 294 aa1.11□□□□□ -2.23
YAR009CYAR009C RPL22BP56628 122 aaKnown RBP1.11□□□□□ -2.23
YAR009CYAR009C ADD37Q03233 198 aa1.11□□□□□ -2.23
YAR009CYAR009C BCH1Q05029 724 aa1.11□□□□□ -2.23
YAR009CYAR009C NDE2Q07500 545 aa1.11□□□□□ -2.23
YAR009CYAR009C TMC1Q08422 150 aaPredicted RBP1.11□□□□□ -2.23
YAR009CYAR009C SRL2Q12020 392 aa1.11□□□□□ -2.23
YAR009CYAR009C AEP3Q12089 606 aa1.11□□□□□ -2.23
YAR009CYAR009C YOL107WQ12239 342 aa1.11□□□□□ -2.23
YAR009CYAR009C ATG34Q12292 412 aa1.11□□□□□ -2.23
YAR009CYAR009C PAR32Q12515 295 aaKnown RBP1.11□□□□□ -2.23
YAR009CYAR009C NAG1Q8TGN9 163 aa1.11□□□□□ -2.23
YAR009CYAR009C ADE4P04046 510 aaKnown RBP1.11□□□□□ -2.23
YAR009CYAR009C GAL7P08431 366 aa1.11□□□□□ -2.23
YAR009CYAR009C NFT1P0CE68 1218 aa1.11□□□□□ -2.23
YAR009CYAR009C RAD57P25301 460 aa1.11□□□□□ -2.23
YAR009CYAR009C PBN1P25580 416 aa1.11□□□□□ -2.23
YAR009CYAR009C POP5P28005 173 aa1.11□□□□□ -2.23
YAR009CYAR009C MPE1P35728 441 aaKnown RBP1.11□□□□□ -2.23
YAR009CYAR009C RTC4P53850 401 aa1.11□□□□□ -2.23
YAR009CYAR009C BSC6Q08280 497 aa1.11□□□□□ -2.23
YAR009CYAR009C TPT1Q12272 230 aaKnown RBP1.11□□□□□ -2.23
YAR009CYAR009C CYC3P06182 269 aa1.1□□□□□ -2.23
YAR009CYAR009C SLM5P25345 492 aaKnown RBP1.1□□□□□ -2.23
YAR009CYAR009C SGE1P33335 543 aa1.1□□□□□ -2.23
YAR009CYAR009C ASC1P38011 319 aaKnown RBP1.1□□□□□ -2.23
YAR009CYAR009C SHE3P38272 425 aaKnown RBP1.1□□□□□ -2.23
YAR009CYAR009C JLP2P40206 208 aa1.1□□□□□ -2.23
YAR009CYAR009C NUP116Q02630 1113 aa1.1□□□□□ -2.23
YAR009CYAR009C PIR1Q03178 341 aa1.1□□□□□ -2.23
YAR009CYAR009C URH1Q04179 340 aa1.1□□□□□ -2.23
YAR009CYAR009C RRP9Q06506 573 aaKnown RBP1.1□□□□□ -2.23
YAR009CYAR009C IRC25Q07951 179 aa1.1□□□□□ -2.23
YAR009CYAR009C YOL029CQ08187 201 aa1.1□□□□□ -2.23
YAR009CYAR009C RAX1Q08760 435 aa1.1□□□□□ -2.23
YAR009CYAR009C WTM1Q12363 437 aaKnown RBP1.1□□□□□ -2.23
YAR009CYAR009C SMC6Q12749 1114 aa1.1□□□□□ -2.23
YAR009CYAR009C RPL1AP0CX43 217 aaKnown RBP1.1□□□□□ -2.23
YAR009CYAR009C RPL1BP0CX44 217 aaKnown RBP1.1□□□□□ -2.23
YAR009CYAR009C NAM2P11325 894 aa1.1□□□□□ -2.23
YAR009CYAR009C MDH1P17505 334 aaKnown RBP RIP-Chip data1.1□□□□□ -2.23not detected
YAR009CYAR009C HXT1P32465 570 aa1.1□□□□□ -2.23
YAR009CYAR009C CSE2P33308 149 aa1.1□□□□□ -2.23
YAR009CYAR009C ATP3P38077 311 aaKnown RBP1.1□□□□□ -2.23
YAR009CYAR009C CHK1P38147 527 aa1.1□□□□□ -2.23
YAR009CYAR009C GGC1P38988 300 aa1.1□□□□□ -2.23
YAR009CYAR009C VHS2P40463 436 aa1.1□□□□□ -2.23
YAR009CYAR009C YIL029CP40538 142 aa1.1□□□□□ -2.23
YAR009CYAR009C TCB2P48231 1178 aa1.1□□□□□ -2.23
YAR009CYAR009C MND1P53102 219 aa1.1□□□□□ -2.23
YAR009CYAR009C MTQ1P53944 314 aa1.1□□□□□ -2.23
YAR009CYAR009C MMT1Q03218 510 aa1.1□□□□□ -2.23
YAR009CYAR009C RPN9Q04062 393 aaKnown RBP1.1□□□□□ -2.23
YAR009CYAR009C YMR027WQ04371 470 aa1.1□□□□□ -2.23
YAR009CYAR009C YML096WQ04489 525 aa1.1□□□□□ -2.23
YAR009CYAR009C YLR345WQ06137 509 aa1.1□□□□□ -2.23
YAR009CYAR009C CMS1Q07897 291 aaKnown RBP1.1□□□□□ -2.23
YAR009CYAR009C BRR2P32639 2163 aaKnown RBP1.1□□□□□ -2.23
YAR009CYAR009C IPP1P00817 287 aaKnown RBP1.09□□□□□ -2.23
YAR009CYAR009C MAS1P10507 462 aa1.09□□□□□ -2.23
YAR009CYAR009C YCL068CP25593 260 aa1.09□□□□□ -2.23
YAR009CYAR009C NIP1P32497 812 aaKnown RBP1.09□□□□□ -2.23
YAR009CYAR009C CYS4P32582 507 aaKnown RBP1.09□□□□□ -2.23
YAR009CYAR009C PXA2P34230 853 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms