RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 PCDHGC5Q9Y5F6 944 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 DOCK8Q8NF50 2099 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 DMXL1Q9Y485 3027 aa9.93□□□□□ -0.82
SMAD4-215ENST00000592911 C2orf71A6NGG8 1288 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 MAGEB2O15479 319 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 PPFIA3O75145 1194 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 C1RP00736 705 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 PDGFBP01127 241 aaPredicted RBP9.92□□□□□ -0.82
SMAD4-215ENST00000592911 LMNAP02545 664 aaKnown RBP9.92□□□□□ -0.82
SMAD4-215ENST00000592911 CALM1P0DP23 149 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 CALM2P0DP24 149 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 CALM3P0DP25 149 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 HOXB1P14653 301 aaPredicted RBP9.92□□□□□ -0.82
SMAD4-215ENST00000592911 IGBP1P78318 339 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 CDC42EP1Q00587 391 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 DSC3Q14574 896 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 USP17L6PQ6QN14 398 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 C15orf39Q6ZRI6 1047 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 TMC7Q7Z402 723 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 FRMD5Q7Z6J6 570 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 RALYLQ86SE5 291 aaKnown RBP9.92□□□□□ -0.82
SMAD4-215ENST00000592911 SMC5Q8IY18 1101 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 KIAA0319LQ8IZA0 1049 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 TRAIPQ9BWF2 469 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 KCNH7Q9NS40 1196 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 DACT1Q9NYF0 836 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 DPP7Q9UHL4 492 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 DUSP12Q9UNI6 340 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 WDR87Q6ZQQ6 2873 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 C2orf16Q68DN1 1984 aa9.92□□□□□ -0.82
SMAD4-215ENST00000592911 MTCL1Q9Y4B5 1905 aaKnown RBP9.92□□□□□ -0.82
SMAD4-215ENST00000592911 SPTBN2O15020 2390 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 hCG_1984214I3L0E3 225 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 MGEA5O60502 916 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 CSPG5O95196 566 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 NUDT7P0C024 238 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 KLRC1P26715 233 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 ACTR2P61160 394 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 TDGQ13569 410 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 FAM102BQ5T8I3 360 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 CWF19L1Q69YN2 538 aaKnown RBP9.91□□□□□ -0.82
SMAD4-215ENST00000592911 PPP1R18Q6NYC8 613 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 ELMSAN1Q6PJG2 1045 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 CYB5R4Q7L1T6 521 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 SLC39A11Q8N1S5 342 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 GPR161Q8N6U8 529 aaKnown RBP9.91□□□□□ -0.82
SMAD4-215ENST00000592911 ZNF713Q8N859 430 aaPredicted RBP9.91□□□□□ -0.82
SMAD4-215ENST00000592911 DTWD2Q8NBA8 298 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 RUFY2Q8WXA3 655 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 CASD1Q96PB1 797 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 MXRA8Q9BRK3 442 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 SFXN1Q9H9B4 322 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 WNT16Q9UBV4 365 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 DBR1Q9UK59 544 aaKnown RBP9.91□□□□□ -0.82
SMAD4-215ENST00000592911 NOC2LQ9Y3T9 749 aaKnown RBP9.91□□□□□ -0.82
SMAD4-215ENST00000592911 TELO2Q9Y4R8 837 aa9.91□□□□□ -0.82
SMAD4-215ENST00000592911 A0A0U1RQF3 1178 aa9.9□□□□□ -0.82
SMAD4-215ENST00000592911 HIDE1A8MVS5 230 aa9.9□□□□□ -0.82
SMAD4-215ENST00000592911 CLASP2O75122 1294 aaKnown RBP9.9□□□□□ -0.82
SMAD4-215ENST00000592911 PAPLNO95428 1278 aa9.9□□□□□ -0.82
SMAD4-215ENST00000592911 SKIP12755 728 aa9.9□□□□□ -0.82
SMAD4-215ENST00000592911 ZSCAN20P17040 1043 aaPredicted RBP9.9□□□□□ -0.82
SMAD4-215ENST00000592911 TMOD1P28289 359 aa9.9□□□□□ -0.82
SMAD4-215ENST00000592911 ALDH7A1P49419 539 aaKnown RBP9.9□□□□□ -0.82
SMAD4-215ENST00000592911 GATMP50440 423 aa9.9□□□□□ -0.82
SMAD4-215ENST00000592911 AP3B2Q13367 1082 aa9.9□□□□□ -0.82
SMAD4-215ENST00000592911 ANGPT1Q15389 498 aa9.9□□□□□ -0.82
SMAD4-215ENST00000592911 CEP55Q53EZ4 464 aa9.9□□□□□ -0.82
SMAD4-215ENST00000592911 CCDC149Q6ZUS6 474 aa9.9□□□□□ -0.82
SMAD4-215ENST00000592911 DGLUCYQ7Z3D6 616 aa9.9□□□□□ -0.82
SMAD4-215ENST00000592911 PLEKHM2Q8IWE5 1019 aa9.9□□□□□ -0.82
SMAD4-215ENST00000592911 CMASQ8NFW8 434 aaPredicted RBP9.9□□□□□ -0.82
SMAD4-215ENST00000592911 TMEM169Q96HH4 297 aa9.9□□□□□ -0.82
SMAD4-215ENST00000592911 FAM167AQ96KS9 214 aa9.9□□□□□ -0.82
SMAD4-215ENST00000592911 MIA3Q5JRA6 1907 aa9.9□□□□□ -0.83
SMAD4-215ENST00000592911 KMT2BQ9UMN6 2715 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-215ENST00000592911 MEIS1O00470 390 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 GPR32O75388 356 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 CTSAP10619 480 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 LIFRP42702 1097 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 RBM10P98175 930 aaKnown RBP9.89□□□□□ -0.83
SMAD4-215ENST00000592911 TMEM62Q0P6H9 643 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 TMEM266Q2M3C6 531 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 PHLDB3Q6NSJ2 640 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 MIS18BP1Q6P0N0 1132 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 ABHD15Q6UXT9 468 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 GPR149Q86SP6 731 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 DDX53Q86TM3 631 aaKnown RBP9.89□□□□□ -0.83
SMAD4-215ENST00000592911 FAM228AQ86W67 206 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 SMAP1Q8IYB5 467 aaPredicted RBP9.89□□□□□ -0.83
SMAD4-215ENST00000592911 ZNF654Q8IZM8 581 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 TMEM87AQ8NBN3 555 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 IGDCC4Q8TDY8 1250 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 TMEM40Q8WWA1 233 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 STAMQ92783 540 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 TMEM87BQ96K49 555 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 LNPKQ9C0E8 428 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 ZBP1Q9H171 429 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 CHST12Q9NRB3 414 aa9.89□□□□□ -0.83
SMAD4-215ENST00000592911 DLL3Q9NYJ7 618 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms