RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 OSBPL7Q9BZF2 842 aa17.15■□□□□ 0.34
IFT20-206ENST00000578122 SCUBE2Q9NQ36 999 aa17.15■□□□□ 0.34
IFT20-206ENST00000578122 SUCLA2Q9P2R7 463 aaPredicted RBP17.15■□□□□ 0.34
IFT20-206ENST00000578122 DNM3Q9UQ16 869 aa17.15■□□□□ 0.34
IFT20-206ENST00000578122 DGAT1O75907 488 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 GRB10Q13322 594 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 KIZQ2M2Z5 673 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 SPECC1Q5M775 1068 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 C9orf50Q5SZB4 431 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 ZNF710Q8N1W2 664 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 KCNG4Q8TDN1 519 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 CALML4Q96GE6 196 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 PPP1R16BQ96T49 567 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 PLIN2Q99541 437 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 MTRQ99707 1265 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 CCSER1Q9C0I3 900 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 NT5C3AQ9H0P0 336 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 BHMT2Q9H2M3 363 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 ATP6V0A4Q9HBG4 840 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 TSHZ2Q9NRE2 1034 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 GINS2Q9Y248 185 aa17.14■□□□□ 0.33
IFT20-206ENST00000578122 E9PMD0 336 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 GAS2O43903 313 aaKnown RBP17.13■□□□□ 0.33
IFT20-206ENST00000578122 USO1O60763 962 aaKnown RBP17.13■□□□□ 0.33
IFT20-206ENST00000578122 GPR32O75388 356 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 EYA4O95677 639 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 GHRP10912 638 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 ACTN1P12814 892 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 NCLP19338 710 aaKnown RBP17.13■□□□□ 0.33
IFT20-206ENST00000578122 CRYBB1P53674 252 aaPredicted RBP17.13■□□□□ 0.33
IFT20-206ENST00000578122 NLRP11P59045 1033 aaKnown RBP17.13■□□□□ 0.33
IFT20-206ENST00000578122 KRT85P78386 507 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 LPIN1Q14693 890 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 TMEM119Q4V9L6 283 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 FBXO47Q5MNV8 452 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 CNKSR3Q6P9H4 555 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 KCNK18Q7Z418 384 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 TDHQ8IZJ6 230 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 KCTD17Q8N5Z5 321 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 RASSF8Q8NHQ8 419 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 TCP11Q8WWU5 503 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 TMEM143Q96AN5 459 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 CHAMP1Q96JM3 812 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 CDHR5Q9HBB8 845 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 XPNPEP1Q9NQW7 623 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 RCOR1Q9UKL0 485 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 RBM19Q9Y4C8 960 aaKnown RBP17.13■□□□□ 0.33
IFT20-206ENST00000578122 SQORQ9Y6N5 450 aa17.13■□□□□ 0.33
IFT20-206ENST00000578122 A0A1W2PPC1 479 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 GPC3P51654 580 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 CDC42EP1Q00587 391 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 KARSQ15046 597 aaKnown RBP17.12■□□□□ 0.33
IFT20-206ENST00000578122 PLEKHG4Q58EX7 1191 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 PADI6Q6TGC4 694 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 USP49Q70CQ1 688 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 OTOP2Q7RTS6 562 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 RHPN2Q8IUC4 686 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 USP38Q8NB14 1042 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 PSPC1Q8WXF1 523 aaKnown RBP17.12■□□□□ 0.33
IFT20-206ENST00000578122 HERVK_113Q902F9 699 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 SPOCK2Q92563 424 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 SEPT8Q92599 483 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 SYMPKQ92797 1274 aaKnown RBP17.12■□□□□ 0.33
IFT20-206ENST00000578122 EPSTI1Q96J88 318 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 RNPC3Q96LT9 517 aaKnown RBP17.12■□□□□ 0.33
IFT20-206ENST00000578122 SCLT1Q96NL6 688 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 MTIF3Q9H2K0 278 aaKnown RBP17.12■□□□□ 0.33
IFT20-206ENST00000578122 ADAMTS10Q9H324 1103 aa17.12■□□□□ 0.33
IFT20-206ENST00000578122 CIZ1Q9ULV3 898 aaPredicted RBP17.12■□□□□ 0.33
IFT20-206ENST00000578122 RBAK-RBAKDNI3L0D1 243 aa17.11■□□□□ 0.33
IFT20-206ENST00000578122 CUTAO60888 179 aa17.11■□□□□ 0.33
IFT20-206ENST00000578122 CYP11B2P19099 503 aa17.11■□□□□ 0.33
IFT20-206ENST00000578122 TXLNAP40222 546 aa17.11■□□□□ 0.33
IFT20-206ENST00000578122 TCTN1Q2MV58 587 aa17.11■□□□□ 0.33
IFT20-206ENST00000578122 TSHZ1Q6ZSZ6 1077 aa17.11■□□□□ 0.33
IFT20-206ENST00000578122 MCPH1Q8NEM0 835 aa17.11■□□□□ 0.33
IFT20-206ENST00000578122 DBF4BQ8NFT6 615 aa17.11■□□□□ 0.33
IFT20-206ENST00000578122 PRPF31Q8WWY3 499 aaKnown RBP17.11■□□□□ 0.33
IFT20-206ENST00000578122 NLRP7Q8WX94 980 aa17.11■□□□□ 0.33
IFT20-206ENST00000578122 ZNF668Q96K58 619 aaPredicted RBP17.11■□□□□ 0.33
IFT20-206ENST00000578122 OSMRQ99650 979 aa17.11■□□□□ 0.33
IFT20-206ENST00000578122 CCDC39Q9UFE4 941 aa17.11■□□□□ 0.33
IFT20-206ENST00000578122 MICAL3Q7RTP6 2002 aa17.11■□□□□ 0.33
IFT20-206ENST00000578122 ASAP2O43150 1006 aa17.1■□□□□ 0.33
IFT20-206ENST00000578122 SSBP05455 408 aaKnown RBP eCLIP17.1■□□□□ 0.33
IFT20-206ENST00000578122 PLCG1P19174 1290 aa17.1■□□□□ 0.33
IFT20-206ENST00000578122 CD52P31358 61 aa17.1■□□□□ 0.33
IFT20-206ENST00000578122 ME1P48163 572 aa17.1■□□□□ 0.33
IFT20-206ENST00000578122 LAMTOR4Q0VGL1 99 aa17.1■□□□□ 0.33
IFT20-206ENST00000578122 MAEAQ7L5Y9 396 aa17.1■□□□□ 0.33
IFT20-206ENST00000578122 KSR1Q8IVT5 923 aa17.1■□□□□ 0.33
IFT20-206ENST00000578122 LEO1Q8WVC0 666 aaPredicted RBP17.1■□□□□ 0.33
IFT20-206ENST00000578122 SPATA32Q96LK8 384 aa17.1■□□□□ 0.33
IFT20-206ENST00000578122 NLRP4Q96MN2 994 aa17.1■□□□□ 0.33
IFT20-206ENST00000578122 IFIH1Q9BYX4 1025 aaKnown RBP17.1■□□□□ 0.33
IFT20-206ENST00000578122 POLR3FQ9H1D9 316 aaPredicted RBP17.1■□□□□ 0.33
IFT20-206ENST00000578122 AGO3Q9H9G7 860 aaKnown RBP17.1■□□□□ 0.33
IFT20-206ENST00000578122 PCDHA7Q9UN72 937 aa17.1■□□□□ 0.33
IFT20-206ENST00000578122 COL4A3BPQ9Y5P4 624 aa17.1■□□□□ 0.33
IFT20-206ENST00000578122 TRIOBPQ9H2D6 2365 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms