RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 CRYBB1P53674 252 aaPredicted RBP6.73□□□□□ -1.33
SMG6-219ENST00000575663 FAM189BP81408 668 aa6.73□□□□□ -1.33
SMG6-219ENST00000575663 HNRNPUQ00839 825 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMG6-219ENST00000575663 IMMTQ16891 758 aaKnown RBP6.73□□□□□ -1.33
SMG6-219ENST00000575663 KIZQ2M2Z5 673 aa6.73□□□□□ -1.33
SMG6-219ENST00000575663 POTEGQ6S5H5 508 aa6.73□□□□□ -1.33
SMG6-219ENST00000575663 DDX53Q86TM3 631 aaKnown RBP6.73□□□□□ -1.33
SMG6-219ENST00000575663 SLC44A3Q8N4M1 653 aa6.73□□□□□ -1.33
SMG6-219ENST00000575663 HELQQ8TDG4 1101 aa6.73□□□□□ -1.33
SMG6-219ENST00000575663 SLC22A17Q8WUG5 538 aa6.73□□□□□ -1.33
SMG6-219ENST00000575663 UBE2Q2Q8WVN8 375 aa6.73□□□□□ -1.33
SMG6-219ENST00000575663 RSAD2Q8WXG1 361 aa6.73□□□□□ -1.33
SMG6-219ENST00000575663 AUTS2Q8WXX7 1259 aa6.73□□□□□ -1.33
SMG6-219ENST00000575663 SDF4Q9BRK5 362 aa6.73□□□□□ -1.33
SMG6-219ENST00000575663 RIOX1Q9H6W3 641 aa6.73□□□□□ -1.33
SMG6-219ENST00000575663 SH2B1Q9NRF2 756 aaPredicted RBP6.73□□□□□ -1.33
SMG6-219ENST00000575663 ZSCAN32Q9NX65 697 aa6.73□□□□□ -1.33
SMG6-219ENST00000575663 SEC63Q9UGP8 760 aaKnown RBP6.73□□□□□ -1.33
SMG6-219ENST00000575663 ZNF292O60281 2723 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 MYH7BA7E2Y1 1941 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 ERICH2A1L162 156 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 SPDYE3A6NKU9 549 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 NT5C1B-RDH14C9J2C7 533 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 SLC30A4O14863 429 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 BACH1O14867 736 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 ITGB5P18084 799 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 KLRC1P26715 233 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 CLCN4P51793 760 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 ACTR2P61160 394 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 CSTF1Q05048 431 aaKnown RBP6.72□□□□□ -1.33
SMG6-219ENST00000575663 NMIQ13287 307 aaPredicted RBP6.72□□□□□ -1.33
SMG6-219ENST00000575663 COL9A3Q14050 684 aaPredicted RBP6.72□□□□□ -1.33
SMG6-219ENST00000575663 DSC3Q14574 896 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 GRM4Q14833 912 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 CLLU1OSQ5K130 101 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 FAM160B1Q5W0V3 765 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 USP17L6PQ6QN14 398 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 ECHDC2Q86YB7 292 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 MAML2Q8IZL2 1156 aaPredicted RBP6.72□□□□□ -1.33
SMG6-219ENST00000575663 CMASQ8NFW8 434 aaPredicted RBP6.72□□□□□ -1.33
SMG6-219ENST00000575663 OTUD7AQ8TE49 926 aaPredicted RBP6.72□□□□□ -1.33
SMG6-219ENST00000575663 IGSF21Q96ID5 467 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 MAP7D2Q96T17 732 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 PPP1R16BQ96T49 567 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 PCYT2Q99447 389 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 FOXQ1Q9C009 403 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 CDHR5Q9HBB8 845 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 WDR6Q9NNW5 1121 aaKnown RBP6.72□□□□□ -1.33
SMG6-219ENST00000575663 MAN1C1Q9NR34 630 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 SLC2A4RGQ9NR83 387 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 RNF19AQ9NV58 838 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 DACT1Q9NYF0 836 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.72□□□□□ -1.33
SMG6-219ENST00000575663 ZSWIM5Q9P217 1185 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 EP300Q09472 2414 aaPredicted RBP6.72□□□□□ -1.33
SMG6-219ENST00000575663 ACACBO00763 2458 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 NFASCO94856 1347 aa6.72□□□□□ -1.33
SMG6-219ENST00000575663 DENND4AQ7Z401 1863 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 FRYLO94915 3013 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 A0A0U1RQF3 1178 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 KANSL1LA0AUZ9 987 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 MEIS2O14770 477 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 CYTH3O43739 400 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 FOXD2O60548 495 aaPredicted RBP6.71□□□□□ -1.34
SMG6-219ENST00000575663 N4BP1O75113 896 aaKnown RBP6.71□□□□□ -1.34
SMG6-219ENST00000575663 VTNP04004 478 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 ADH1AP07327 375 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 GLULP15104 373 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 KIF5BP33176 963 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 STARD6P59095 220 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 PRKCQQ04759 706 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 RNASELQ05823 741 aaKnown RBP6.71□□□□□ -1.34
SMG6-219ENST00000575663 PPP2R5DQ14738 602 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 UBXN2BQ14CS0 331 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 SART3Q15020 963 aaKnown RBP6.71□□□□□ -1.34
SMG6-219ENST00000575663 ZNF484Q5JVG2 852 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 GET4Q7L5D6 327 aaPredicted RBP6.71□□□□□ -1.34
SMG6-219ENST00000575663 KIAA0319LQ8IZA0 1049 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 ZNF710Q8N1W2 664 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 METTL13Q8N6R0 699 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 ZBTB44Q8NCP5 570 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 PIBF1Q8WXW3 757 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 PHKBQ93100 1093 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 RRP36Q96EU6 259 aaKnown RBP6.71□□□□□ -1.34
SMG6-219ENST00000575663 SCLT1Q96NL6 688 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 FAM126AQ9BYI3 521 aaPredicted RBP6.71□□□□□ -1.34
SMG6-219ENST00000575663 RHOBTB2Q9BYZ6 727 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 OSBPL6Q9BZF3 934 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 PIDD1Q9HB75 910 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 JADE2Q9NQC1 790 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 MRPL17Q9NRX2 175 aaKnown RBP6.71□□□□□ -1.34
SMG6-219ENST00000575663 RALYQ9UKM9 306 aaKnown RBP6.71□□□□□ -1.34
SMG6-219ENST00000575663 CEP131Q9UPN4 1083 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 AKT3Q9Y243 479 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 SSX2IPQ9Y2D8 614 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 GTF3C3Q9Y5Q9 886 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 UBIAD1Q9Y5Z9 338 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 NUMBLQ9Y6R0 609 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 CACNA1GO43497 2377 aa6.71□□□□□ -1.34
SMG6-219ENST00000575663 TPRP12270 2363 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms