RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 SCLT1Q96NL6 688 aa15.62■□□□□ 0.09
VPS11-205ENST00000534551 RUSC1Q9BVN2 902 aa15.62■□□□□ 0.09
VPS11-205ENST00000534551 ATP6V0A4Q9HBG4 840 aa15.62■□□□□ 0.09
VPS11-205ENST00000534551 NLRC5Q86WI3 1866 aa15.62■□□□□ 0.09
VPS11-205ENST00000534551 KDM3AQ9Y4C1 1321 aa15.62■□□□□ 0.09
VPS11-205ENST00000534551 CHD7Q9P2D1 2997 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 COL4A4P53420 1690 aaPredicted RBP15.61■□□□□ 0.09
VPS11-205ENST00000534551 A0A087WZ62 844 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 A0A087X0B3 334 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 ARHGEF35A5YM69 484 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 SPTLC2O15270 562 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 PLCG1P19174 1290 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 TMOD1P28289 359 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 ANP32AP39687 249 aaKnown RBP15.61■□□□□ 0.09
VPS11-205ENST00000534551 WDR5P61964 334 aaKnown RBP15.61■□□□□ 0.09
VPS11-205ENST00000534551 HYIQ5T013 277 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 PADI6Q6TGC4 694 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 NLRP7Q8WX94 980 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 BSNDQ8WZ55 320 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 NACC1Q96RE7 527 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 FDXACB1Q9BRP7 624 aaPredicted RBP15.61■□□□□ 0.09
VPS11-205ENST00000534551 POLR3FQ9H1D9 316 aaPredicted RBP15.61■□□□□ 0.09
VPS11-205ENST00000534551 TMX1Q9H3N1 280 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 ERVK-5Q9HDB9 667 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 DBR1Q9UK59 544 aaKnown RBP15.61■□□□□ 0.09
VPS11-205ENST00000534551 SRPRBQ9Y5M8 271 aaKnown RBP15.61■□□□□ 0.09
VPS11-205ENST00000534551 COL4A3BPQ9Y5P4 624 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 TTC3P53804 2025 aa15.61■□□□□ 0.09
VPS11-205ENST00000534551 A0A1W2PPC1 479 aa15.6■□□□□ 0.09
VPS11-205ENST00000534551 MGEA5O60502 916 aa15.6■□□□□ 0.09
VPS11-205ENST00000534551 PARNO95453 639 aaKnown RBP15.6■□□□□ 0.09
VPS11-205ENST00000534551 YEATS4O95619 227 aa15.6■□□□□ 0.09
VPS11-205ENST00000534551 NCLP19338 710 aaKnown RBP15.6■□□□□ 0.09
VPS11-205ENST00000534551 IBSPP21815 317 aaPredicted RBP15.6■□□□□ 0.09
VPS11-205ENST00000534551 LONP1P36776 959 aaKnown RBP15.6■□□□□ 0.09
VPS11-205ENST00000534551 PBX2P40425 430 aa15.6■□□□□ 0.09
VPS11-205ENST00000534551 RABGGTBP53611 331 aa15.6■□□□□ 0.09
VPS11-205ENST00000534551 PAK2Q13177 524 aa15.6■□□□□ 0.09
VPS11-205ENST00000534551 NME8Q8N427 588 aa15.6■□□□□ 0.09
VPS11-205ENST00000534551 KRI1Q8N9T8 703 aaKnown RBP15.6■□□□□ 0.09
VPS11-205ENST00000534551 SEPT8Q92599 483 aa15.6■□□□□ 0.09
VPS11-205ENST00000534551 CDK5RAP3Q96JB5 506 aa15.6■□□□□ 0.09
VPS11-205ENST00000534551 AK8Q96MA6 479 aa15.6■□□□□ 0.09
VPS11-205ENST00000534551 GDPD2Q9HCC8 539 aa15.6■□□□□ 0.09
VPS11-205ENST00000534551 TSHZ2Q9NRE2 1034 aa15.6■□□□□ 0.09
VPS11-205ENST00000534551 PADI3Q9ULW8 664 aa15.6■□□□□ 0.09
VPS11-205ENST00000534551 FNDC1Q4ZHG4 1894 aaPredicted RBP15.6■□□□□ 0.09
VPS11-205ENST00000534551 CHD9Q3L8U1 2897 aa15.6■□□□□ 0.09
VPS11-205ENST00000534551 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.59■□□□□ 0.09
VPS11-205ENST00000534551 DGAT1O75907 488 aa15.59■□□□□ 0.09
VPS11-205ENST00000534551 EYA4O95677 639 aa15.59■□□□□ 0.09
VPS11-205ENST00000534551 RPLP2P05387 115 aaKnown RBP15.59■□□□□ 0.09
VPS11-205ENST00000534551 SSBP05455 408 aaKnown RBP eCLIP15.59■□□□□ 0.09
VPS11-205ENST00000534551 ACTN1P12814 892 aa15.59■□□□□ 0.09
VPS11-205ENST00000534551 MYOGP15173 224 aa15.59■□□□□ 0.09
VPS11-205ENST00000534551 GLRA2P23416 452 aa15.59■□□□□ 0.09
VPS11-205ENST00000534551 UBA7P41226 1012 aa15.59■□□□□ 0.09
VPS11-205ENST00000534551 FXR1P51114 621 aaKnown RBP eCLIP15.59■□□□□ 0.09
VPS11-205ENST00000534551 CRYBB1P53674 252 aaPredicted RBP15.59■□□□□ 0.09
VPS11-205ENST00000534551 RAD51AP2Q09MP3 1159 aa15.59■□□□□ 0.09
VPS11-205ENST00000534551 LAMTOR4Q0VGL1 99 aa15.59■□□□□ 0.09
VPS11-205ENST00000534551 NFX1Q12986 1120 aaKnown RBP15.59■□□□□ 0.09
VPS11-205ENST00000534551 CAPSQ13938 189 aa15.59■□□□□ 0.09
VPS11-205ENST00000534551 FAM102BQ5T8I3 360 aa15.59■□□□□ 0.09
VPS11-205ENST00000534551 RASSF8Q8NHQ8 419 aa15.59■□□□□ 0.09
VPS11-205ENST00000534551 PRPF31Q8WWY3 499 aaKnown RBP15.59■□□□□ 0.09
VPS11-205ENST00000534551 PSPC1Q8WXF1 523 aaKnown RBP15.59■□□□□ 0.09
VPS11-205ENST00000534551 BLOC1S4Q9NUP1 217 aa15.59■□□□□ 0.09
VPS11-205ENST00000534551 PPME1Q9Y570 386 aa15.59■□□□□ 0.09
VPS11-205ENST00000534551 SLC4A7Q9Y6M7 1214 aa15.59■□□□□ 0.09
VPS11-205ENST00000534551 NPHP3-ACAD11A0A0J9YXS1 232 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 RPS6KA5O75582 802 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 BAIAP3O94812 1187 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 SRGAP2CP0DJJ0 459 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 PDIA4P13667 645 aaKnown RBP15.58■□□□□ 0.08
VPS11-205ENST00000534551 DARSP14868 501 aaKnown RBP15.58■□□□□ 0.08
VPS11-205ENST00000534551 MUTP22033 750 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 ARL2P36404 184 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 DNM2P50570 870 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 SLC12A3P55017 1021 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 CACNB1Q02641 598 aaPredicted RBP15.58■□□□□ 0.08
VPS11-205ENST00000534551 DHX8Q14562 1220 aaKnown RBP15.58■□□□□ 0.08
VPS11-205ENST00000534551 TPRNQ4KMQ1 711 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 AXDND1Q5T1B0 1012 aaPredicted RBP15.58■□□□□ 0.08
VPS11-205ENST00000534551 FAM117BQ6P1L5 589 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 SHC4Q6S5L8 630 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 MYOCDQ8IZQ8 938 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 RNF149Q8NC42 400 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 JPH2Q9BR39 696 aaPredicted RBP15.58■□□□□ 0.08
VPS11-205ENST00000534551 KIFC3Q9BVG8 833 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 CCSER1Q9C0I3 900 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 MINDY3Q9H8M7 445 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 IFT122Q9HBG6 1241 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 ST3GAL5Q9UNP4 418 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 DNM3Q9UQ16 869 aa15.58■□□□□ 0.08
VPS11-205ENST00000534551 MORC2Q9Y6X9 1032 aaPredicted RBP15.58■□□□□ 0.08
VPS11-205ENST00000534551 PPP6R2O75170 966 aa15.57■□□□□ 0.08
VPS11-205ENST00000534551 ARHGEF15O94989 841 aa15.57■□□□□ 0.08
VPS11-205ENST00000534551 PLA2G4BP0C869 781 aa15.57■□□□□ 0.08
VPS11-205ENST00000534551 XRCC6P12956 609 aaKnown RBP eCLIP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms