RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 GBP4Q96PP9 640 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 RNF38Q9H0F5 515 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 PANK3Q9H999 370 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 HELLSQ9NRZ9 838 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CHMP5Q9NZZ3 219 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CGGBP1Q9UFW8 167 aaPredicted RBP6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 BLOC1S6Q9UL45 172 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 INVSQ9Y283 1065 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CFAP74Q9C0B2 1584 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 IQGAP1P46940 1657 aa6.54□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 A0A0B4J203 849 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CCDC196A0A1B0GTZ2 297 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 RASA4BC9J798 803 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 TPP1O14773 563 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 PPFIA2O75334 1257 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 MTRF1O75570 445 aaKnown RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 B3GALNT1O75752 331 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CPP00450 1065 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 GALNSP34059 522 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 HOXD12P35452 270 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ECE1P42892 770 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 PAPOLAP51003 745 aaKnown RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ALDH5A1P51649 535 aaPredicted RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 RCAN1P53805 252 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CSE1LP55060 971 aaKnown RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 C19orf57Q0VDD7 668 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 EIF4A2Q14240 407 aaKnown RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CLUL1Q15846 466 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 TRIM68Q6AZZ1 485 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 FAAH2Q6GMR7 532 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 FIP1L1Q6UN15 594 aaKnown RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 B3GNT9Q6UX72 402 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SYNE3Q6ZMZ3 975 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CENPQQ7L2Z9 268 aaPredicted RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SRGAP1Q7Z6B7 1085 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 GAS2L3Q86XJ1 694 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ANKRD18AQ8IVF6 992 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 NKAPQ8N5F7 415 aaKnown RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 BAHD1Q8TBE0 780 aaPredicted RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SPATA18Q8TC71 538 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 DCAF4Q8WV16 495 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ZNF75CPQ92670 426 aaPredicted RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 TRIM11Q96F44 468 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 TAAR9Q96RI9 348 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 TCHPQ9BT92 498 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 FANCFQ9NPI8 374 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ANKEF1Q9NU02 776 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CLIP2Q9UDT6 1046 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 DNM3Q9UQ16 869 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 KIDINS220Q9ULH0 1771 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 NEURL4Q96JN8 1562 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 KIF1BO60333 1816 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 LINC00854A0A1B0GVQ3 168 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CNOT4O95628 575 aaKnown RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SLC4A1P02730 911 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SOD2P04179 222 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ECI1P42126 302 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 NLRP12P59046 1061 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SARNPP82979 210 aaKnown RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 TRIM14Q14142 442 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 KIF4BQ2VIQ3 1234 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 PLA2G4EQ3MJ16 856 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 NOL9Q5SY16 702 aaKnown RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 AP1ARQ63HQ0 302 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CD109Q6YHK3 1445 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 HID1Q8IV36 788 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SLC44A2Q8IWA5 706 aaPredicted RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 DZIP1LQ8IYY4 767 aaKnown RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 FAM26EQ8N5C1 309 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 LILRB1Q8NHL6 650 aaPredicted RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CCT6BQ92526 530 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 ARHGEF2Q92974 986 aaKnown RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 KIFC2Q96AC6 838 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 PDLIM2Q96JY6 352 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 PPM1MQ96MI6 270 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SLC39A3Q9BRY0 314 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 TEX13AQ9BXU3 409 aaPredicted RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 NKX2-4Q9H2Z4 354 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 FAM204AQ9H8W3 233 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 GP6Q9HCN6 339 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 CTNNA3Q9UI47 895 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 KIAA1210Q9ULL0 1709 aa6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 EIF3AQ14152 1382 aaKnown RBP6.53□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 SCAF11Q99590 1463 aaKnown RBP6.52□□□□□ -1.36
ALMS1-IT1-201ENST00000441587 USP19O94966 1318 aa6.52□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 ITIH6Q6UXX5 1313 aa6.52□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 SENP3-EIF4A1A0A087X0R7 540 aa6.52□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 WDR64B1ANS9 1081 aa6.52□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 TNFRSF10AO00220 468 aa6.52□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 TRAF5O00463 557 aa6.52□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PCDHGA12O60330 932 aa6.52□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 RING1Q06587 406 aa6.52□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 G3BP1Q13283 466 aaKnown RBP eCLIP6.52□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PSMD6Q15008 389 aa6.52□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PRSS53Q2L4Q9 553 aa6.52□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 PPM1JQ5JR12 505 aa6.52□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 C10orf76Q5T2E6 689 aa6.52□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 FAM182BQ5T319 152 aa6.52□□□□□ -1.37
ALMS1-IT1-201ENST00000441587 VPS53Q5VIR6 699 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms