RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 AIPL1Q9NZN9 384 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 RNF14Q9UBS8 474 aa13.74□□□□□ -0.21
PPP4R1-202ENST00000400555 DOCK2Q92608 1830 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 AFF2P51816 1311 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 PHF20L1A8MW92 1017 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 FTLP02792 175 aaPredicted RBP13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 VIMP08670 466 aaKnown RBP13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 HARSP12081 509 aaKnown RBP13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 HOXD13P35453 343 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 FMO5P49326 533 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 FAM102BQ5T8I3 360 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 STXBP4Q6ZWJ1 553 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 WHAMMQ8TF30 809 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 FAM118BQ9BPY3 351 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 LXNQ9BS40 222 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 KIFC3Q9BVG8 833 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 GPRC5CQ9NQ84 441 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 GGT7Q9UJ14 662 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 USP20Q9Y2K6 914 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 BZW2Q9Y6E2 419 aaKnown RBP13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 EMSYQ7Z589 1322 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 C21orf2O43822 256 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 FOSP01100 380 aaPredicted RBP13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 EIF2AK2P19525 551 aaKnown RBP13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 CDR1P51861 262 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 B4GALNT4Q76KP1 1039 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 EFCAB13Q8IY85 973 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 DCAF4Q8WV16 495 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 BICD1Q96G01 975 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 INTS2Q9H0H0 1204 aaKnown RBP13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 ARHGEF10LQ9HCE6 1279 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 PLCB1Q9NQ66 1216 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 DAAM1Q9Y4D1 1078 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 DCDC2CA8MYV0 355 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 AP3B2Q13367 1082 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 PPP1R7Q15435 360 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 CRY2Q49AN0 593 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 SH3BP5LQ7L8J4 393 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 SLC30A5Q8TAD4 765 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 PBKQ96KB5 322 aa13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 ATF5Q9Y2D1 282 aaPredicted RBP13.73□□□□□ -0.21
PPP4R1-202ENST00000400555 H0YIN7 160 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 HIP1RO75146 1068 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 PPP1R37O75864 691 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 EYA4O95677 639 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 SOX5P35711 763 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 CLK2P49760 499 aaKnown RBP13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 DLG4P78352 724 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 EPHA7Q15375 998 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 SYCE1Q8N0S2 351 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 OGFOD1Q8N543 542 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 SCLT1Q96NL6 688 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 PCDHGC5Q9Y5F6 944 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 PCDHA2Q9Y5H9 948 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 ASTN1O14525 1302 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 TESPA1A2RU30 521 aaPredicted RBP13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 SLC16A4O15374 487 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 NPR1P16066 1061 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 PEX3P56589 373 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 DR1Q01658 176 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 NLRP14Q86W24 1093 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 CDAN1Q8IWY9 1227 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 ETNPPLQ8TBG4 499 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 FAM20AQ96MK3 541 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 FMO2Q99518 471 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 PAIP2Q9BPZ3 127 aaKnown RBP13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 A0A1B0GUL6 1792 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 SLITRK3O94933 977 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 LMBRD2Q68DH5 695 aaPredicted RBP13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 MICALCLQ6ZW33 695 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 AGBL1Q96MI9 1066 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 POP1Q99575 1024 aaKnown RBP13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 KCNK9Q9NPC2 374 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 GDF3Q9NR23 364 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 CCPG1Q9ULG6 757 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 USTQ9Y2C2 406 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 COL14A1Q05707 1796 aaKnown RBP13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 PLCH1Q4KWH8 1693 aa13.72□□□□□ -0.21
PPP4R1-202ENST00000400555 IPO5O00410 1097 aaKnown RBP13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 TGFB1I1O43294 461 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 LCA5LO95447 670 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 MDH1P40925 334 aaKnown RBP13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 SF3B2Q13435 895 aaKnown RBP13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 DGKZQ13574 1117 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 CAPN12Q6ZSI9 719 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 CCDC50Q8IVM0 306 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 RPUSD2Q8IZ73 545 aaKnown RBP13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 TAB3Q8N5C8 712 aaPredicted RBP13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 ARFGAP2Q8N6H7 521 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 ZSWIM2Q8NEG5 633 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 ZNF473Q8WTR7 871 aaKnown RBP13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 WDR18Q9BV38 432 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 UTRNP46939 3433 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 GSTTP1A0A1W2PQM5 241 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 MARCKSL1P49006 195 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 SOX10P56693 466 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 PADI6Q6TGC4 694 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 RUFY4Q6ZNE9 571 aa13.71□□□□□ -0.21
PPP4R1-202ENST00000400555 IQCKQ8N0W5 287 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms