RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PRR16Q569H4 304 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 PLEKHG4Q58EX7 1191 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 FAM26DQ5JW98 314 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 KRT25Q7Z3Z0 450 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 KIF18AQ8NI77 898 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 RASGRP4Q8TDF6 673 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 GDPD5Q8WTR4 605 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 RAD9AQ99638 391 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 ZBED2Q9BTP6 218 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 KCNF1Q9H3M0 494 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 TELO2Q9Y4R8 837 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 MORC2Q9Y6X9 1032 aaPredicted RBP11.57□□□□□ -0.56
COL5A1-202ENST00000371820 MICAL3Q7RTP6 2002 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 KAT6AQ92794 2004 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 COL1A2P08123 1366 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 POTEB3A0JP26 581 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 MBLAC1A4D2B0 266 aaPredicted RBP11.56□□□□□ -0.56
COL5A1-202ENST00000371820 LINC01553A4QN01 128 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 RBAK-RBAKDNI3L0D1 243 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 AP5Z1O43299 807 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 HBP1O60381 514 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 PPFIA3O75145 1194 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 PSAPP07602 524 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 CTSHP09668 335 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 INSRRP14616 1297 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 IGBP1P78318 339 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 PLCB4Q15147 1175 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 IER5Q5VY09 327 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 CEP135Q66GS9 1140 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 PDXDC2PQ6P474 469 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 POTEBQ6S5H4 581 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 MOXD1Q6UVY6 613 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 FAM43BQ6ZT52 329 aaPredicted RBP11.56□□□□□ -0.56
COL5A1-202ENST00000371820 DBF4BQ8NFT6 615 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 PCYT2Q99447 389 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 BRMS1Q9HCU9 246 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 ZNF302Q9NR11 478 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 LMCD1Q9NZU5 365 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 PYCARDQ9ULZ3 195 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 SAMM50Q9Y512 469 aa11.56□□□□□ -0.56
COL5A1-202ENST00000371820 IGKV6D-21A0A0A0MT36 114 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 CCDC194A0A1B0GVG4 234 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 GOLGA6L9A6NEM1 432 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 WDR64B1ANS9 1081 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 GAS7O60861 476 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 ZNF202O95125 648 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 BMP15O95972 392 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 TPM1P09493 284 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 SKILP12757 684 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 PRKCSHP14314 528 aaPredicted RBP11.55□□□□□ -0.56
COL5A1-202ENST00000371820 FDPSP14324 419 aaKnown RBP11.55□□□□□ -0.56
COL5A1-202ENST00000371820 SFNP31947 248 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 ERVK-21P61565 698 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 NONOQ15233 471 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL5A1-202ENST00000371820 ZNF484Q5JVG2 852 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 ABHD15Q6UXT9 468 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
COL5A1-202ENST00000371820 TBCKQ8TEA7 893 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 ATP8B4Q8TF62 1192 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 HLA-CQ95604 372 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 FAM167AQ96KS9 214 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 TGS1Q96RS0 853 aaKnown RBP11.55□□□□□ -0.56
COL5A1-202ENST00000371820 RIT2Q99578 217 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 NAP1L4Q99733 375 aaKnown RBP11.55□□□□□ -0.56
COL5A1-202ENST00000371820 PYM1Q9BRP8 204 aaKnown RBP11.55□□□□□ -0.56
COL5A1-202ENST00000371820 TEKT3Q9BXF9 490 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 IFIH1Q9BYX4 1025 aaKnown RBP11.55□□□□□ -0.56
COL5A1-202ENST00000371820 SUGCTQ9HAC7 445 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 PCDHA2Q9Y5H9 948 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 PCDHA10Q9Y5I2 948 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 SQORQ9Y6N5 450 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 BRWD1Q9NSI6 2320 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 COL4A6Q14031 1691 aa11.55□□□□□ -0.56
COL5A1-202ENST00000371820 SMIM35A0A1B0GVV1 85 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 RIOK3O14730 519 aaKnown RBP11.54□□□□□ -0.56
COL5A1-202ENST00000371820 DHX15O43143 795 aaKnown RBP11.54□□□□□ -0.56
COL5A1-202ENST00000371820 CCNE2O96020 404 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 GCFC2P16383 781 aaKnown RBP11.54□□□□□ -0.56
COL5A1-202ENST00000371820 SYKP43405 635 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 JAK3P52333 1124 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 TUBB4BP68371 445 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 MRPS6P82932 125 aaKnown RBP11.54□□□□□ -0.56
COL5A1-202ENST00000371820 CEBPZQ03701 1054 aaKnown RBP11.54□□□□□ -0.56
COL5A1-202ENST00000371820 Q4G0T1 1027 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 ODR4Q5SWX8 454 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 LRCH2Q5VUJ6 765 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 FAM117BQ6P1L5 589 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 CCDC60Q8IWA6 550 aaPredicted RBP11.54□□□□□ -0.56
COL5A1-202ENST00000371820 NME8Q8N427 588 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 TRIML1Q8N9V2 468 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 ZNF579Q8NAF0 562 aaKnown RBP11.54□□□□□ -0.56
COL5A1-202ENST00000371820 RDM1Q8NG50 284 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 DNAJB3Q8WWF6 145 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 BBXQ8WY36 941 aaPredicted RBP11.54□□□□□ -0.56
COL5A1-202ENST00000371820 ANKRD7Q92527 254 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 SRRTQ9BXP5 876 aaKnown RBP11.54□□□□□ -0.56
COL5A1-202ENST00000371820 GTPBP4Q9BZE4 634 aaKnown RBP11.54□□□□□ -0.56
COL5A1-202ENST00000371820 MTUS1Q9ULD2 1270 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 INSL6Q9Y581 213 aa11.54□□□□□ -0.56
COL5A1-202ENST00000371820 TRPV2Q9Y5S1 764 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms