RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 IRX2Q9BZI1 471 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 EPC1Q9H2F5 836 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 ZCCHC17Q9NP64 241 aaKnown RBP18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 EYA4O95677 639 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 CHRNA3P32297 505 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 CCNYQ8ND76 341 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 IPO11Q9UI26 975 aaKnown RBP18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 MYO1CO00159 1063 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 CLDN3O15551 220 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 SRGAP2BP0DMP2 458 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 FDX1P10109 184 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 ZNF543Q08ER8 600 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 C7orf31Q8N865 590 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 BANK1Q8NDB2 785 aa18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 DDX47Q9H0S4 455 aaKnown RBP18.34■□□□□ 0.53
TRAPPC11-201ENST00000334690 FAM187AA6NFU0 413 aa18.33■□□□□ 0.53
TRAPPC11-201ENST00000334690 TECPR2O15040 1411 aa18.33■□□□□ 0.53
TRAPPC11-201ENST00000334690 DBN1Q16643 649 aa18.33■□□□□ 0.53
TRAPPC11-201ENST00000334690 KRT39Q6A163 491 aa18.33■□□□□ 0.53
TRAPPC11-201ENST00000334690 NSUN6Q8TEA1 469 aaKnown RBP18.33■□□□□ 0.53
TRAPPC11-201ENST00000334690 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.33■□□□□ 0.53
TRAPPC11-201ENST00000334690 HPS5Q9UPZ3 1129 aa18.33■□□□□ 0.53
TRAPPC11-201ENST00000334690 ZC3H13Q5T200 1668 aaKnown RBP18.33■□□□□ 0.53
TRAPPC11-201ENST00000334690 CAMTA2O94983 1202 aa18.33■□□□□ 0.53
TRAPPC11-201ENST00000334690 GSTA1P08263 222 aa18.33■□□□□ 0.53
TRAPPC11-201ENST00000334690 GSTA2P09210 222 aa18.33■□□□□ 0.53
TRAPPC11-201ENST00000334690 ECE1P42892 770 aa18.33■□□□□ 0.53
TRAPPC11-201ENST00000334690 ENOSF1Q7L5Y1 443 aa18.33■□□□□ 0.53
TRAPPC11-201ENST00000334690 LRRC4Q9HBW1 653 aa18.33■□□□□ 0.53
TRAPPC11-201ENST00000334690 KCNQ2O43526 872 aa18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 SRGAP2CP0DJJ0 459 aa18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 MAGEA9P43362 315 aa18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 SESN3P58005 492 aa18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 NR1H3Q13133 447 aa18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 SEPT6Q14141 434 aa18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 EPHA7Q15375 998 aa18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 EIF2AK1Q9BQI3 630 aaKnown RBP18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 VCX3AQ9NNX9 186 aa18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 ADGRB1O14514 1584 aa18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 ECE2O60344 883 aa18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 ZBED1O96006 694 aa18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 SAT1P21673 171 aa18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 TFDP2Q14188 446 aa18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 DNAAF3Q8N9W5 541 aa18.33■□□□□ 0.52
TRAPPC11-201ENST00000334690 DENND3A2RUS2 1198 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 SLC16A4O15374 487 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 SLC26A4O43511 780 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 NCK2O43639 380 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 MMEP08473 750 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 VSNL1P62760 191 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 GIMAP8Q8ND71 665 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 INTS2Q9H0H0 1204 aaKnown RBP18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 CD163L1Q9NR16 1453 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 C21orf2O43822 256 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 FTLP02792 175 aaPredicted RBP18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 OSTNP61366 133 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 ITKQ08881 620 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 MAPK6Q16659 721 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 CEP55Q53EZ4 464 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 BZW1Q7L1Q6 419 aaKnown RBP18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 RSPH3Q86UC2 560 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 SALL3Q9BXA9 1300 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 IQANK1A0A1B0GTG1 560 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 KIF3CO14782 793 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 CALB1P05937 261 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 STXBP2Q15833 593 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 SLC18A3Q16572 532 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 SLC27A3Q5K4L6 730 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 RSRC2Q7L4I2 434 aaKnown RBP18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 EEPD1Q7L9B9 569 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 GLYCTKQ8IVS8 523 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 KAZALD1Q96I82 304 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 LXNQ9BS40 222 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 ESYT3A0FGR9 886 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 STAT3P40763 770 aa18.32■□□□□ 0.52
TRAPPC11-201ENST00000334690 PSMA2P25787 234 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 PSMC5P62195 406 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 STK4Q13043 487 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 SPARCL1Q14515 664 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 FAM133BQ5BKY9 247 aaKnown RBP18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 PDCD7Q8N8D1 485 aaKnown RBP18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 ZNF564Q8TBZ8 553 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 NLRP4Q96MN2 994 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 HOXC10Q9NYD6 342 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 FRMPD1Q5SYB0 1578 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 TBX3O15119 743 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 TBXAS1P24557 533 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 RCN2Q14257 317 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 TADA2BQ86TJ2 420 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 VIPAS39Q9H9C1 493 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 POLD4Q9HCU8 107 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 TUFT1Q9NNX1 390 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 STRIP2Q9ULQ0 834 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 AGLP35573 1532 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 KRT37O76014 449 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 SMARCA1P28370 1054 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 SOX5P35711 763 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 ARMCX2Q7L311 632 aa18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 GSPT2Q8IYD1 628 aaKnown RBP18.31■□□□□ 0.52
TRAPPC11-201ENST00000334690 THNSL1Q8IYQ7 743 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms