RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B YDR018CQ12185 396 aa-0.01□□□□□ -2.41
snR39BsnR39B RTN2Q12443 393 aa-0.01□□□□□ -2.41
snR39BsnR39B RPL3P14126 387 aaKnown RBP-0.02□□□□□ -2.41
snR39BsnR39B PMT2P31382 759 aa-0.02□□□□□ -2.41
snR39BsnR39B MCM10P32354 571 aa-0.02□□□□□ -2.41
snR39BsnR39B TOA2P32774 122 aa-0.02□□□□□ -2.41
snR39BsnR39B OTU2P38747 307 aaKnown RBP-0.02□□□□□ -2.41
snR39BsnR39B CTM1P38818 585 aa-0.02□□□□□ -2.41
snR39BsnR39B YIL054WP40524 105 aa-0.02□□□□□ -2.41
snR39BsnR39B ECO1P43605 281 aa-0.02□□□□□ -2.41
snR39BsnR39B YFR045WP43617 309 aa-0.02□□□□□ -2.41
snR39BsnR39B AQR1P53943 586 aa-0.02□□□□□ -2.41
snR39BsnR39B SCS7Q03529 384 aa-0.02□□□□□ -2.41
snR39BsnR39B ATG16Q03818 150 aa-0.02□□□□□ -2.41
snR39BsnR39B YDR131CQ03899 556 aa-0.02□□□□□ -2.41
snR39BsnR39B DCR2Q05924 578 aa-0.02□□□□□ -2.41
snR39BsnR39B DIS3Q08162 1001 aaKnown RBP-0.02□□□□□ -2.41
snR39BsnR39B HEM4P06174 275 aa-0.03□□□□□ -2.41
snR39BsnR39B SRV2P17555 526 aaKnown RBP-0.03□□□□□ -2.41
snR39BsnR39B CLC1P17891 233 aa-0.03□□□□□ -2.41
snR39BsnR39B SCO1P23833 295 aa-0.03□□□□□ -2.41
snR39BsnR39B ROX1P25042 368 aa-0.03□□□□□ -2.41
snR39BsnR39B ITR2P30606 609 aa-0.03□□□□□ -2.41
snR39BsnR39B ARO4P32449 370 aaKnown RBP-0.03□□□□□ -2.41
snR39BsnR39B MCR1P36060 302 aaKnown RBP-0.03□□□□□ -2.41
snR39BsnR39B NAB3P38996 802 aaKnown RBP RIP-Chip data-0.03□□□□□ -2.41not detected
snR39BsnR39B YER188WP40103 239 aa-0.03□□□□□ -2.41
snR39BsnR39B RRG9P40156 214 aa-0.03□□□□□ -2.41
snR39BsnR39B MIC19P43594 170 aa-0.03□□□□□ -2.41
snR39BsnR39B COS5P47187 383 aa-0.03□□□□□ -2.41
snR39BsnR39B DSK2P48510 373 aa-0.03□□□□□ -2.41
snR39BsnR39B PIB2P53191 635 aa-0.03□□□□□ -2.41
snR39BsnR39B KAP120Q02932 1032 aa-0.03□□□□□ -2.41
snR39BsnR39B RRP45Q05636 305 aaKnown RBP-0.03□□□□□ -2.41
snR39BsnR39B GAS2Q06135 555 aa-0.03□□□□□ -2.41
snR39BsnR39B COS7Q07788 383 aa-0.03□□□□□ -2.41
snR39BsnR39B GRX6Q12438 231 aa-0.03□□□□□ -2.41
snR39BsnR39B DFM1Q12743 341 aaKnown RBP-0.03□□□□□ -2.41
snR39BsnR39B YHR086W-AQ3E746 53 aa-0.03□□□□□ -2.41
snR39BsnR39B GCN4P03069 281 aa-0.04□□□□□ -2.42
snR39BsnR39B BGL2P15703 313 aaKnown RBP-0.04□□□□□ -2.42
snR39BsnR39B RPL16AP26784 199 aaKnown RBP-0.04□□□□□ -2.42
snR39BsnR39B NTC20P38302 140 aaPredicted RBP-0.04□□□□□ -2.42
snR39BsnR39B RCK1P38622 512 aa-0.04□□□□□ -2.42
snR39BsnR39B MMF1P40185 145 aaKnown RBP-0.04□□□□□ -2.42
snR39BsnR39B STE24P47154 453 aa-0.04□□□□□ -2.42
snR39BsnR39B MNP1P53163 194 aaPredicted RBP-0.04□□□□□ -2.42
snR39BsnR39B VPS68Q12016 184 aa-0.04□□□□□ -2.42
snR39BsnR39B AEP3Q12089 606 aa-0.04□□□□□ -2.42
snR39BsnR39B IES3Q12345 250 aa-0.04□□□□□ -2.42
snR39BsnR39B RPS14AP06367 137 aaKnown RBP-0.05□□□□□ -2.42
snR39BsnR39B CAB3P36076 571 aa-0.05□□□□□ -2.42
snR39BsnR39B SMF1P38925 575 aa-0.05□□□□□ -2.42
snR39BsnR39B RPS14BP39516 138 aaKnown RBP-0.05□□□□□ -2.42
snR39BsnR39B LSM4P40070 187 aaKnown RBP-0.05□□□□□ -2.42
snR39BsnR39B AIM23P47015 356 aa-0.05□□□□□ -2.42
snR39BsnR39B PMT5P52867 743 aa-0.05□□□□□ -2.42
snR39BsnR39B BNI5P53890 448 aaKnown RBP-0.05□□□□□ -2.42
snR39BsnR39B RPN9Q04062 393 aaKnown RBP-0.05□□□□□ -2.42
snR39BsnR39B MMT2Q08970 484 aa-0.05□□□□□ -2.42
snR39BsnR39B YDL109CQ12103 647 aa-0.05□□□□□ -2.42
snR39BsnR39B RUP1Q12242 671 aa-0.05□□□□□ -2.42
snR39BsnR39B YOP1Q12402 180 aa-0.05□□□□□ -2.42
snR39BsnR39B ARG3P05150 338 aa-0.06□□□□□ -2.42
snR39BsnR39B RPL23AP0CX41 137 aaKnown RBP-0.06□□□□□ -2.42
snR39BsnR39B RPL23BP0CX42 137 aaKnown RBP-0.06□□□□□ -2.42
snR39BsnR39B MIR1P23641 311 aaKnown RBP-0.06□□□□□ -2.42
snR39BsnR39B YER079WP40052 210 aaKnown RBP-0.06□□□□□ -2.42
snR39BsnR39B EFM3P47163 339 aa-0.06□□□□□ -2.42
snR39BsnR39B OCA2P53949 197 aa-0.06□□□□□ -2.42
snR39BsnR39B YMR244WQ04018 355 aa-0.06□□□□□ -2.42
snR39BsnR39B MMR1Q06324 491 aa-0.06□□□□□ -2.42
snR39BsnR39B YDR056CQ12025 205 aa-0.06□□□□□ -2.42
snR39BsnR39B DST1P07273 309 aa-0.07□□□□□ -2.42
snR39BsnR39B ARO3P14843 370 aaKnown RBP-0.07□□□□□ -2.42
snR39BsnR39B ZRT3P34240 503 aa-0.07□□□□□ -2.42
snR39BsnR39B IST2P38250 946 aa-0.07□□□□□ -2.42
snR39BsnR39B TAE1P38340 232 aa-0.07□□□□□ -2.42
snR39BsnR39B VID27P40157 782 aa-0.07□□□□□ -2.42
snR39BsnR39B CAK1P43568 368 aaPredicted RBP-0.07□□□□□ -2.42
snR39BsnR39B YJL027CP47063 138 aaPredicted RBP-0.07□□□□□ -2.42
snR39BsnR39B CAX4P53223 239 aa-0.07□□□□□ -2.42
snR39BsnR39B GAT3Q07928 141 aa-0.07□□□□□ -2.42
snR39BsnR39B SLM3Q12093 417 aa-0.07□□□□□ -2.42
snR39BsnR39B RTC5Q12108 567 aaKnown RBP-0.07□□□□□ -2.42
snR39BsnR39B YER188C-AP0C0V2 99 aa-0.08□□□□□ -2.42
snR39BsnR39B RRT12P25381 491 aa-0.08□□□□□ -2.42
snR39BsnR39B CSE1P33307 960 aa-0.08□□□□□ -2.42
snR39BsnR39B VPS24P36095 224 aaKnown RBP-0.08□□□□□ -2.42
snR39BsnR39B FUI1P38196 639 aa-0.08□□□□□ -2.42
snR39BsnR39B MMS21P38632 267 aa-0.08□□□□□ -2.42
snR39BsnR39B DSE2P38844 325 aa-0.08□□□□□ -2.42
snR39BsnR39B STN1P38960 494 aa-0.08□□□□□ -2.42
snR39BsnR39B SEC27P41811 889 aaKnown RBP-0.08□□□□□ -2.42
snR39BsnR39B YJR146WP47174 117 aa-0.08□□□□□ -2.42
snR39BsnR39B YGL138CP53122 345 aa-0.08□□□□□ -2.42
snR39BsnR39B SSU72P53538 206 aaPredicted RBP-0.08□□□□□ -2.42
snR39BsnR39B TIM10P87108 93 aa-0.08□□□□□ -2.42
snR39BsnR39B SKO1Q02100 647 aa-0.08□□□□□ -2.42
snR39BsnR39B INP1Q03694 420 aa-0.08□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms