RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	TDA1	Q03533	586 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	HER2	Q03557	464 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	YGK3	Q12222	375 aa	Predicted RBP	1.49	□□□□□ -2.17
RLM1	YPL089C	EAF3	Q12432	401 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	MRPL23	Q12487	163 aa	Predicted RBP	1.49	□□□□□ -2.17
RLM1	YPL089C	DCP1	Q12517	231 aa	Predicted RBP	1.49	□□□□□ -2.17
RLM1	YPL089C	YCR024C-B	Q3E7Z8	88 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	PUT4	P15380	627 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	UGA1	P17649	471 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	SAR1	P20606	190 aa	Known RBP	1.49	□□□□□ -2.17
RLM1	YPL089C	VMA5	P31412	392 aa	Known RBP	1.49	□□□□□ -2.17
RLM1	YPL089C	RAD23	P32628	398 aa	Known RBP	1.49	□□□□□ -2.17
RLM1	YPL089C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	1.49	□□□□□ -2.17	not detected
RLM1	YPL089C	ECM8	P38246	354 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	NDT80	P38830	627 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	YHR182W	P38870	785 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	UTP25	P40498	721 aa	Known RBP	1.49	□□□□□ -2.17
RLM1	YPL089C	MAM33	P40513	266 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	HAC1	P41546	238 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	KEG1	P43614	200 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	TRF5	P48561	642 aa	Known RBP	1.49	□□□□□ -2.17
RLM1	YPL089C	SHE10	P53075	577 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	RPN14	P53196	417 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	1.49	□□□□□ -2.17	not detected
RLM1	YPL089C	PRM6	Q04705	352 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	PBA1	Q05778	276 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	BUR2	Q05949	395 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	VAC14	Q06708	880 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	YPR091C	Q06833	770 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	FCY22	Q12119	530 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	ERV2	Q12284	196 aa		1.49	□□□□□ -2.17
RLM1	YPL089C	CAR2	P07991	424 aa	Known RBP	1.48	□□□□□ -2.17
RLM1	YPL089C	MSS116	P15424	664 aa	Known RBP	1.48	□□□□□ -2.17
RLM1	YPL089C	CSE2	P33308	149 aa		1.48	□□□□□ -2.17
RLM1	YPL089C	MMS21	P38632	267 aa		1.48	□□□□□ -2.17
RLM1	YPL089C	YHR131C	P38835	850 aa		1.48	□□□□□ -2.17
RLM1	YPL089C	PTH1	P38876	190 aa	Known RBP	1.48	□□□□□ -2.17
RLM1	YPL089C	FET3	P38993	636 aa		1.48	□□□□□ -2.17
RLM1	YPL089C	CDC40	P40968	455 aa	Predicted RBP	1.48	□□□□□ -2.17
RLM1	YPL089C	YCH1	P42937	148 aa		1.48	□□□□□ -2.17
RLM1	YPL089C	CIN2	P46670	268 aa		1.48	□□□□□ -2.17
RLM1	YPL089C	CTK3	P46963	296 aa	Predicted RBP	1.48	□□□□□ -2.17
RLM1	YPL089C	YJR030C	P47101	745 aa		1.48	□□□□□ -2.17
RLM1	YPL089C	YJR085C	P47131	105 aa	Known RBP	1.48	□□□□□ -2.17
RLM1	YPL089C	YGR168C	P53293	376 aa		1.48	□□□□□ -2.17
RLM1	YPL089C	ALF1	P53904	254 aa		1.48	□□□□□ -2.17
RLM1	YPL089C	ELP3	Q02908	557 aa	Known RBP	1.48	□□□□□ -2.17
RLM1	YPL089C	SPO19	Q03029	223 aa		1.48	□□□□□ -2.17
RLM1	YPL089C	RRG8	Q06109	277 aa		1.48	□□□□□ -2.17
RLM1	YPL089C	HHF1	P02309	103 aa	Known RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	SUP35	P05453	685 aa	Known RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	SPT15	P13393	240 aa	Known RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	MSI1	P13712	422 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	MEK1	P24719	497 aa	Predicted RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	DCC1	P25559	380 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	LDB16	P25587	256 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	POP5	P28005	173 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	DEG1	P31115	442 aa	Known RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	SPO23	P33757	523 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	YBL059W	P34224	193 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	YKL070W	P36087	169 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	YPT35	P38815	214 aa	Known RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	VPS45	P38932	577 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	GCD14	P46959	383 aa	Predicted RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	TAF6	P53040	516 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	YGL185C	P53100	379 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	MST27	P53176	234 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	PXR1	P53335	271 aa	Predicted RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	RVB1	Q03940	463 aa	Known RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	YMR111C	Q04461	462 aa	Predicted RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	APC4	Q04601	652 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	ERV41	Q04651	352 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	CSM3	Q04659	317 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	RTN1	Q04947	295 aa	Known RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	YDL114W	Q07530	308 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	TMS1	Q12116	473 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	PCL9	Q12477	304 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	HTZ1	Q12692	134 aa	Known RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	INO80	P53115	1489 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	STE2	D6VTK4	431 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	RPS18A	P0CX55	146 aa	Known RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	RPS18B	P0CX56	146 aa	Predicted RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	NAM2	P11325	894 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	RPB5	P20434	215 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	DAL2	P25335	343 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	NAM9	P27929	486 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	ERG9	P29704	444 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	YKL162C	P36052	402 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	YKR015C	P36111	568 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	RFS1	P38234	210 aa	Known RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	PAN6	P40459	309 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	REE1	P40893	198 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	LOH1	P47055	219 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	GTO1	P48239	356 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	ADD37	Q03233	198 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	HRI1	Q05905	244 aa	Known RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	RIF2	Q06208	395 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	DNL4	Q08387	944 aa	Predicted RBP	1.47	□□□□□ -2.17
RLM1	YPL089C	YDL199C	Q12407	687 aa		1.47	□□□□□ -2.17
RLM1	YPL089C	UBA3	Q99344	299 aa		1.47	□□□□□ -2.17

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms