RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeast

Gene TRM112, Length 408 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM112	YNR046W	MNN9	P39107	395 aa	Known RBP	3.16	□□□□□ -1.9
TRM112	YNR046W	FDH1	Q08911	376 aa		3.16	□□□□□ -1.9
TRM112	YNR046W	TMS1	Q12116	473 aa		3.16	□□□□□ -1.9
TRM112	YNR046W	IZH2	Q12442	317 aa		3.16	□□□□□ -1.9
TRM112	YNR046W	PFK27	Q12471	397 aa	Predicted RBP	3.16	□□□□□ -1.9
TRM112	YNR046W	RPL18A	P0CX49	186 aa	Known RBP	3.15	□□□□□ -1.91
TRM112	YNR046W	RPL18B	P0CX50	186 aa	Known RBP	3.15	□□□□□ -1.91
TRM112	YNR046W	RPS18A	P0CX55	146 aa	Known RBP	3.15	□□□□□ -1.91
TRM112	YNR046W	RPS18B	P0CX56	146 aa	Predicted RBP	3.15	□□□□□ -1.91
TRM112	YNR046W	FAR1	P21268	830 aa		3.15	□□□□□ -1.91
TRM112	YNR046W	RPL16A	P26784	199 aa	Known RBP	3.15	□□□□□ -1.91
TRM112	YNR046W	FUN26	P31381	517 aa		3.15	□□□□□ -1.91
TRM112	YNR046W	VMA5	P31412	392 aa	Known RBP	3.15	□□□□□ -1.91
TRM112	YNR046W	ZUO1	P32527	433 aa	Known RBP	3.15	□□□□□ -1.91
TRM112	YNR046W	MRPL40	P36534	297 aa		3.15	□□□□□ -1.91
TRM112	YNR046W	AVT5	P38176	459 aa		3.15	□□□□□ -1.91
TRM112	YNR046W	BTT1	P40314	149 aa	Predicted RBP	3.15	□□□□□ -1.91
TRM112	YNR046W	AIM20	P40451	204 aa		3.15	□□□□□ -1.91
TRM112	YNR046W	YJR030C	P47101	745 aa		3.15	□□□□□ -1.91
TRM112	YNR046W	BIR1	P47134	954 aa		3.15	□□□□□ -1.91
TRM112	YNR046W	MSC3	Q05812	728 aa		3.15	□□□□□ -1.91
TRM112	YNR046W	STE23	Q06010	1027 aa		3.15	□□□□□ -1.91
TRM112	YNR046W	MRPL35	Q06678	367 aa		3.15	□□□□□ -1.91
TRM112	YNR046W	HIF1	Q12373	385 aa		3.15	□□□□□ -1.91
TRM112	YNR046W	YDL199C	Q12407	687 aa		3.15	□□□□□ -1.91
TRM112	YNR046W	DET1	Q99288	334 aa	Known RBP	3.15	□□□□□ -1.91
TRM112	YNR046W	UBA3	Q99344	299 aa		3.15	□□□□□ -1.91
TRM112	YNR046W	SAR1	P20606	190 aa	Known RBP	3.14	□□□□□ -1.91
TRM112	YNR046W	YPS1	P32329	569 aa		3.14	□□□□□ -1.91
TRM112	YNR046W	MYO3	P36006	1272 aa		3.14	□□□□□ -1.91
TRM112	YNR046W	IST2	P38250	946 aa		3.14	□□□□□ -1.91
TRM112	YNR046W	SWC5	P38326	303 aa		3.14	□□□□□ -1.91
TRM112	YNR046W	YPT35	P38815	214 aa	Known RBP	3.14	□□□□□ -1.91
TRM112	YNR046W	LSM12	P38828	187 aa	Known RBP	3.14	□□□□□ -1.91
TRM112	YNR046W	ATG7	P38862	630 aa		3.14	□□□□□ -1.91
TRM112	YNR046W	REX2	P54964	269 aa	Known RBP	3.14	□□□□□ -1.91
TRM112	YNR046W	EGD1	Q02642	157 aa	Known RBP	3.14	□□□□□ -1.91
TRM112	YNR046W	CAB5	Q03941	241 aa		3.14	□□□□□ -1.91
TRM112	YNR046W	BUR2	Q05949	395 aa		3.14	□□□□□ -1.91
TRM112	YNR046W	PLP2	Q12017	286 aa		3.14	□□□□□ -1.91
TRM112	YNR046W	NAG1	Q8TGN9	163 aa		3.14	□□□□□ -1.91
TRM112	YNR046W	HEM4	P06174	275 aa		3.13	□□□□□ -1.91
TRM112	YNR046W	RPC40	P07703	335 aa	Known RBP	3.13	□□□□□ -1.91
TRM112	YNR046W	UTR1	P21373	530 aa		3.13	□□□□□ -1.91
TRM112	YNR046W	RBK1	P25332	333 aa		3.13	□□□□□ -1.91
TRM112	YNR046W	DCC1	P25559	380 aa		3.13	□□□□□ -1.91
TRM112	YNR046W	ERG9	P29704	444 aa		3.13	□□□□□ -1.91
TRM112	YNR046W	ACB1	P31787	87 aa		3.13	□□□□□ -1.91
TRM112	YNR046W	MKK1	P32490	508 aa		3.13	□□□□□ -1.91
TRM112	YNR046W	CIN2	P46670	268 aa		3.13	□□□□□ -1.91
TRM112	YNR046W	VOA1	P53262	265 aa		3.13	□□□□□ -1.91
TRM112	YNR046W	CRH1	P53301	507 aa		3.13	□□□□□ -1.91
TRM112	YNR046W	ERV25	P54837	211 aa	Known RBP	3.13	□□□□□ -1.91
TRM112	YNR046W	RVB1	Q03940	463 aa	Known RBP	3.13	□□□□□ -1.91
TRM112	YNR046W	CUR1	Q06469	252 aa		3.13	□□□□□ -1.91
TRM112	YNR046W	TLG2	Q08144	397 aa		3.13	□□□□□ -1.91
TRM112	YNR046W	RRG7	Q08774	242 aa	Predicted RBP	3.13	□□□□□ -1.91
TRM112	YNR046W	YDL109C	Q12103	647 aa		3.13	□□□□□ -1.91
TRM112	YNR046W	RAD1	P06777	1100 aa		3.12	□□□□□ -1.91
TRM112	YNR046W	RVS161	P25343	265 aa	Known RBP	3.12	□□□□□ -1.91
TRM112	YNR046W	ITR2	P30606	609 aa		3.12	□□□□□ -1.91
TRM112	YNR046W	MRPL10	P36520	322 aa		3.12	□□□□□ -1.91
TRM112	YNR046W	IML3	P38265	245 aa		3.12	□□□□□ -1.91
TRM112	YNR046W	MEP1	P40260	492 aa		3.12	□□□□□ -1.91
TRM112	YNR046W	UTP25	P40498	721 aa	Known RBP	3.12	□□□□□ -1.91
TRM112	YNR046W	EGT2	P42835	1041 aa		3.12	□□□□□ -1.91
TRM112	YNR046W	YNL320W	P42840	284 aa		3.12	□□□□□ -1.91
TRM112	YNR046W	CTK3	P46963	296 aa	Predicted RBP	3.12	□□□□□ -1.91
TRM112	YNR046W	LOH1	P47055	219 aa		3.12	□□□□□ -1.91
TRM112	YNR046W	NAS6	P50086	228 aa		3.12	□□□□□ -1.91
TRM112	YNR046W	TAF6	P53040	516 aa		3.12	□□□□□ -1.91
TRM112	YNR046W	SHY1	P53266	389 aa		3.12	□□□□□ -1.91
TRM112	YNR046W	YGR168C	P53293	376 aa		3.12	□□□□□ -1.91
TRM112	YNR046W	DCP1	Q12517	231 aa	Predicted RBP	3.12	□□□□□ -1.91
TRM112	YNR046W	ADH2	P00331	348 aa	Known RBP	3.11	□□□□□ -1.91
TRM112	YNR046W	GAL7	P08431	366 aa		3.11	□□□□□ -1.91
TRM112	YNR046W	RPL23A	P0CX41	137 aa	Known RBP	3.11	□□□□□ -1.91
TRM112	YNR046W	RPL23B	P0CX42	137 aa	Known RBP	3.11	□□□□□ -1.91
TRM112	YNR046W	MSS116	P15424	664 aa	Known RBP	3.11	□□□□□ -1.91
TRM112	YNR046W	DBP3	P20447	523 aa	Known RBP	3.11	□□□□□ -1.91
TRM112	YNR046W	AAT2	P23542	418 aa	Known RBP	3.11	□□□□□ -1.91
TRM112	YNR046W	ANR2	P36090	516 aa	Predicted RBP	3.11	□□□□□ -1.91
TRM112	YNR046W	MMS21	P38632	267 aa		3.11	□□□□□ -1.91
TRM112	YNR046W	PTI1	P39927	425 aa	Predicted RBP	3.11	□□□□□ -1.91
TRM112	YNR046W	AIM10	P39965	576 aa	Known RBP	3.11	□□□□□ -1.91
TRM112	YNR046W	LOC1	P43586	204 aa	Predicted RBP	3.11	□□□□□ -1.91
TRM112	YNR046W	BNS1	P50084	137 aa		3.11	□□□□□ -1.91
TRM112	YNR046W	CSM3	Q04659	317 aa		3.11	□□□□□ -1.91
TRM112	YNR046W	FSH2	Q05015	223 aa		3.11	□□□□□ -1.91
TRM112	YNR046W	PAL1	Q05518	499 aa	Known RBP	3.11	□□□□□ -1.91
TRM112	YNR046W	GAS2	Q06135	555 aa		3.11	□□□□□ -1.91
TRM112	YNR046W	DNL4	Q08387	944 aa	Predicted RBP	3.11	□□□□□ -1.91
TRM112	YNR046W	SLF1	Q12034	447 aa	Known RBP	3.11	□□□□□ -1.91
TRM112	YNR046W	WTM1	Q12363	437 aa	Known RBP	3.11	□□□□□ -1.91
TRM112	YNR046W	PUT4	P15380	627 aa		3.1	□□□□□ -1.91
TRM112	YNR046W	GIT1	P25346	518 aa		3.1	□□□□□ -1.91
TRM112	YNR046W	LDS1	P31379	325 aa		3.1	□□□□□ -1.91
TRM112	YNR046W	BUD2	P33314	1104 aa		3.1	□□□□□ -1.91
TRM112	YNR046W	OXA1	P39952	402 aa		3.1	□□□□□ -1.91
TRM112	YNR046W	RTT105	P40063	208 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 116.4 ms