RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C HRB1P38922 454 aaKnown RBP RIP-Chip data11.59□□□□□ -0.55not detected
BDF1YLR399C RTT105P40063 208 aa11.59□□□□□ -0.55
BDF1YLR399C UTP25P40498 721 aaKnown RBP11.59□□□□□ -0.55
BDF1YLR399C GAT1P43574 510 aa11.59□□□□□ -0.55
BDF1YLR399C CSN12P47130 423 aa11.59□□□□□ -0.55
BDF1YLR399C COS10P52924 374 aa11.59□□□□□ -0.55
BDF1YLR399C NDD1Q08887 554 aa11.59□□□□□ -0.55
BDF1YLR399C CBP6P07253 162 aaPredicted RBP11.58□□□□□ -0.56
BDF1YLR399C REV1P12689 985 aa11.58□□□□□ -0.56
BDF1YLR399C MRP20P32387 263 aa11.58□□□□□ -0.56
BDF1YLR399C KRE6P32486 720 aa11.58□□□□□ -0.56
BDF1YLR399C SHE2P36068 246 aaKnown RBP RIP-Chip data11.58□□□□□ -0.56not detected
BDF1YLR399C TCM62P38228 572 aaKnown RBP11.58□□□□□ -0.56
BDF1YLR399C UBX7P38349 436 aa11.58□□□□□ -0.56
BDF1YLR399C YIL024CP40543 189 aa11.58□□□□□ -0.56
BDF1YLR399C MOG1P47123 218 aa11.58□□□□□ -0.56
BDF1YLR399C MUP1P50276 574 aa11.58□□□□□ -0.56
BDF1YLR399C TRM112P53738 135 aaPredicted RBP11.58□□□□□ -0.56
BDF1YLR399C YAF9P53930 226 aa11.58□□□□□ -0.56
BDF1YLR399C CIT2P08679 460 aa11.58□□□□□ -0.56
BDF1YLR399C CYS3P31373 394 aaKnown RBP11.58□□□□□ -0.56
BDF1YLR399C LOT5P34234 306 aa11.58□□□□□ -0.56
BDF1YLR399C GPT2P36148 743 aa11.58□□□□□ -0.56
BDF1YLR399C SEN34P39707 275 aa11.58□□□□□ -0.56
BDF1YLR399C YIR035CP40579 254 aa11.58□□□□□ -0.56
BDF1YLR399C YJL043WP47053 257 aa11.58□□□□□ -0.56
BDF1YLR399C DCR2Q05924 578 aa11.58□□□□□ -0.56
BDF1YLR399C NUT2Q06213 157 aa11.58□□□□□ -0.56
BDF1YLR399C YLR040CQ07988 224 aa11.58□□□□□ -0.56
BDF1YLR399C BSC1Q12140 328 aa11.58□□□□□ -0.56
BDF1YLR399C VMA9Q3E7B6 73 aa11.58□□□□□ -0.56
BDF1YLR399C PHO5P00635 467 aa11.57□□□□□ -0.56
BDF1YLR399C PRE7P23724 241 aaKnown RBP11.57□□□□□ -0.56
BDF1YLR399C ECM25P32525 599 aa11.57□□□□□ -0.56
BDF1YLR399C GLC3P32775 704 aa11.57□□□□□ -0.56
BDF1YLR399C YIL166CP40445 542 aa11.57□□□□□ -0.56
BDF1YLR399C GPG1P53130 126 aa11.57□□□□□ -0.56
BDF1YLR399C MTL1P53214 551 aa11.57□□□□□ -0.56
BDF1YLR399C RIM13Q03792 727 aa11.57□□□□□ -0.56
BDF1YLR399C YPR091CQ06833 770 aa11.57□□□□□ -0.56
BDF1YLR399C YDL086WQ07505 273 aa11.57□□□□□ -0.56
BDF1YLR399C ZEO1Q08245 113 aa11.57□□□□□ -0.56
BDF1YLR399C YDL176WQ12027 708 aa11.57□□□□□ -0.56
BDF1YLR399C MCM10P32354 571 aa11.56□□□□□ -0.56
BDF1YLR399C PRS3P38689 320 aaKnown RBP11.56□□□□□ -0.56
BDF1YLR399C DPB11P47027 764 aaPredicted RBP11.56□□□□□ -0.56
BDF1YLR399C YNL140CP53910 189 aa11.56□□□□□ -0.56
BDF1YLR399C YSA1Q01976 231 aa11.56□□□□□ -0.56
BDF1YLR399C YLR257WQ06146 321 aaKnown RBP11.56□□□□□ -0.56
BDF1YLR399C ANT1Q06497 328 aa11.56□□□□□ -0.56
BDF1YLR399C TMS1Q12116 473 aa11.56□□□□□ -0.56
BDF1YLR399C AIM7Q12156 149 aa11.56□□□□□ -0.56
BDF1YLR399C Q0142Q9ZZW4 58 aa11.56□□□□□ -0.56
BDF1YLR399C AHC2P25649 128 aa11.56□□□□□ -0.56
BDF1YLR399C CDC13P32797 924 aaKnown RBP11.56□□□□□ -0.56
BDF1YLR399C ALG3P38179 458 aa11.56□□□□□ -0.56
BDF1YLR399C RMD6P39975 231 aa11.56□□□□□ -0.56
BDF1YLR399C RFC2P40348 353 aa11.56□□□□□ -0.56
BDF1YLR399C GSF2Q04697 403 aaKnown RBP11.56□□□□□ -0.56
BDF1YLR399C DCI1Q08558 271 aa11.56□□□□□ -0.56
BDF1YLR399C GAL80P04387 435 aa11.55□□□□□ -0.56
BDF1YLR399C CDC23P16522 626 aa11.55□□□□□ -0.56
BDF1YLR399C RPA135P22138 1203 aaKnown RBP11.55□□□□□ -0.56
BDF1YLR399C STE50P25344 346 aa11.55□□□□□ -0.56
BDF1YLR399C LDS1P31379 325 aa11.55□□□□□ -0.56
BDF1YLR399C MSS51P32335 436 aa11.55□□□□□ -0.56
BDF1YLR399C SUR1P33300 382 aa11.55□□□□□ -0.56
BDF1YLR399C APE3P37302 537 aaKnown RBP11.55□□□□□ -0.56
BDF1YLR399C RTC2P38279 296 aa11.55□□□□□ -0.56
BDF1YLR399C YIL165CP40446 119 aa11.55□□□□□ -0.56
BDF1YLR399C CAT5P41735 233 aa11.55□□□□□ -0.56
BDF1YLR399C POP1P41812 875 aa11.55□□□□□ -0.56
BDF1YLR399C RPE1P46969 238 aa11.55□□□□□ -0.56
BDF1YLR399C YJR030CP47101 745 aa11.55□□□□□ -0.56
BDF1YLR399C PHO23P50947 330 aa11.55□□□□□ -0.56
BDF1YLR399C SDT1P53078 280 aa11.55□□□□□ -0.56
BDF1YLR399C RRP40Q08285 240 aaKnown RBP11.55□□□□□ -0.56
BDF1YLR399C TRM8Q12009 286 aa11.55□□□□□ -0.56
BDF1YLR399C SFM1Q12314 213 aa11.55□□□□□ -0.56
BDF1YLR399C PST1Q12355 444 aa11.55□□□□□ -0.56
BDF1YLR399C CDC9P04819 755 aa11.55□□□□□ -0.56
BDF1YLR399C STE12P13574 688 aa11.55□□□□□ -0.56
BDF1YLR399C IDH2P28241 369 aaKnown RBP11.55□□□□□ -0.56
BDF1YLR399C MAC1P35192 417 aa11.55□□□□□ -0.56
BDF1YLR399C SHM2P37291 469 aaKnown RBP11.55□□□□□ -0.56
BDF1YLR399C PGD1P40356 397 aa11.55□□□□□ -0.56
BDF1YLR399C DUG1P43616 481 aaKnown RBP11.55□□□□□ -0.56
BDF1YLR399C SYF2P53277 215 aaPredicted RBP11.55□□□□□ -0.56
BDF1YLR399C DUS1P53759 423 aaKnown RBP11.55□□□□□ -0.56
BDF1YLR399C YLR036CQ07986 203 aa11.55□□□□□ -0.56
BDF1YLR399C IRC10Q08118 586 aa11.55□□□□□ -0.56
BDF1YLR399C PRB1P09232 635 aa11.54□□□□□ -0.56
BDF1YLR399C PPH22P23595 377 aa11.54□□□□□ -0.56
BDF1YLR399C SUA5P32579 426 aa11.54□□□□□ -0.56
BDF1YLR399C ARC19P33204 171 aaKnown RBP11.54□□□□□ -0.56
BDF1YLR399C SKN1P33336 771 aa11.54□□□□□ -0.56
BDF1YLR399C CCZ1P38273 704 aa11.54□□□□□ -0.56
BDF1YLR399C IME4P41833 600 aa11.54□□□□□ -0.56
BDF1YLR399C ATF2P53296 535 aa11.54□□□□□ -0.56
BDF1YLR399C GOR1P53839 350 aa11.54□□□□□ -0.56
Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms