RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS33	YLR396C	ELP2	P42935	788 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	OCA1	P50946	238 aa	Predicted RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	NOP19	P53317	196 aa	Predicted RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	DBP6	P53734	629 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	IMP4	P53941	290 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	COG5	P53951	403 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	KTR5	P53966	522 aa	Predicted RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	RNY1	Q02933	434 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	YMR099C	Q03161	297 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	HER2	Q03557	464 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	SPC19	Q03954	165 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	ECM11	Q04110	302 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	MYO5	Q04439	1219 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	YLR297W	Q05899	129 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	SMD2	Q06217	110 aa	Known RBP	3.13	□□□□□ -1.91
VPS33	YLR396C	VTA1	Q06263	330 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	PSY3	Q12318	242 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	HRT3	Q12347	344 aa		3.13	□□□□□ -1.91
VPS33	YLR396C	CAR1	P00812	333 aa	Known RBP	3.12	□□□□□ -1.91
VPS33	YLR396C	RAD10	P06838	210 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	KSS1	P14681	368 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	CBS2	P14905	389 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	HXT2	P23585	541 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	PHO84	P25297	587 aa	Known RBP	3.12	□□□□□ -1.91
VPS33	YLR396C	YCR022C	P25620	114 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	PRO3	P32263	286 aa	Known RBP	3.12	□□□□□ -1.91
VPS33	YLR396C	DBF4	P32325	704 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	NDC1	P32500	655 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	TAF14	P35189	244 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	YHI9	P38765	294 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	DHH1	P39517	506 aa	Known RBP	3.12	□□□□□ -1.91
VPS33	YLR396C	RTT101	P47050	842 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	YGR149W	P48236	432 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	CWC23	P52868	283 aa	Predicted RBP	3.12	□□□□□ -1.91
VPS33	YLR396C	NBP1	P52919	319 aa	Predicted RBP	3.12	□□□□□ -1.91
VPS33	YLR396C	SCS3	P53012	380 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	MRPL50	P53724	139 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	DID2	P69771	204 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	NNT1	Q05874	261 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
VPS33	YLR396C	YOR289W	Q12012	251 aa	Predicted RBP	3.12	□□□□□ -1.91
VPS33	YLR396C	MED2	Q12124	431 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	SNU23	Q12368	194 aa	Predicted RBP	3.12	□□□□□ -1.91
VPS33	YLR396C	ATG31	Q12421	196 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	RRP36	Q12481	300 aa	Predicted RBP	3.12	□□□□□ -1.91
VPS33	YLR396C	RPL15A	P05748	204 aa	Known RBP	3.12	□□□□□ -1.91
VPS33	YLR396C	RPL3	P14126	387 aa	Known RBP	3.12	□□□□□ -1.91
VPS33	YLR396C	CKA2	P19454	339 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	DBP3	P20447	523 aa	Known RBP	3.12	□□□□□ -1.91
VPS33	YLR396C	ATS1	P31386	333 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	AFG1	P32317	509 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	PTR2	P32901	601 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	VPS51	P36116	164 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	NAT2	P37293	288 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	SLX1	P38324	304 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	FAA2	P39518	744 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	KRE29	P40026	464 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	ALD5	P40047	520 aa	Known RBP	3.12	□□□□□ -1.91
VPS33	YLR396C	FAU1	P40099	211 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	DLD2	P46681	530 aa	Known RBP	3.12	□□□□□ -1.91
VPS33	YLR396C	FYV6	P53913	173 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	IRC15	Q02733	499 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	RSN1	Q03516	953 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	YET3	Q07451	203 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	AAD15	Q08361	143 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	TY3A-G	Q12173	290 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	GPM3	Q12326	303 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	RTR2	Q12378	196 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	TY3A-I	Q99219	290 aa		3.12	□□□□□ -1.91
VPS33	YLR396C	STE2	D6VTK4	431 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	RHO2	P06781	192 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	GAL3	P13045	520 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	MTF1	P14908	341 aa	Known RBP	3.11	□□□□□ -1.91
VPS33	YLR396C	DBF2	P22204	572 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	PPH22	P23595	377 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	BUB3	P26449	341 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	YIM1	P28625	365 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	GDH2	P33327	1092 aa	Known RBP	3.11	□□□□□ -1.91
VPS33	YLR396C	MRPL17	P36528	281 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	ECM13	P38195	257 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	RPR2	P40571	144 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	POP1	P41812	875 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	EFM3	P47163	339 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	LIF1	P53150	421 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	SLT2	Q00772	484 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	TVP15	Q03860	143 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	GAL83	Q04739	417 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	ERP1	Q05359	219 aa	Known RBP	3.11	□□□□□ -1.91
VPS33	YLR396C	INM2	Q05533	292 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	VPS74	Q06385	345 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	PGC1	Q08959	321 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	MED4	Q12343	284 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	ISN1	Q99312	450 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	MYO1	P08964	1928 aa		3.11	□□□□□ -1.91
VPS33	YLR396C	TEF1	P02994	458 aa	Known RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	COX4	P04037	155 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	ATP10	P18496	279 aa		3.1	□□□□□ -1.91
VPS33	YLR396C	SAR1	P20606	190 aa	Known RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	FUN19	P28003	413 aa	Predicted RBP	3.1	□□□□□ -1.91
VPS33	YLR396C	PPQ1	P32945	549 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms