RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C ARC19P33204 171 aaKnown RBP9.56□□□□□ -0.88
SHM2YLR058C YBR138CP38277 524 aa9.56□□□□□ -0.88
SHM2YLR058C SBE22P38814 852 aa9.56□□□□□ -0.88
SHM2YLR058C PEX18P38855 283 aa9.56□□□□□ -0.88
SHM2YLR058C ALP1P38971 573 aa9.56□□□□□ -0.88
SHM2YLR058C AST2P39945 430 aaKnown RBP9.56□□□□□ -0.88
SHM2YLR058C ISC1P40015 477 aaKnown RBP9.56□□□□□ -0.88
SHM2YLR058C RRG9P40156 214 aa9.56□□□□□ -0.88
SHM2YLR058C SOK1P40317 901 aa9.56□□□□□ -0.88
SHM2YLR058C CIN1P40987 1014 aa9.56□□□□□ -0.88
SHM2YLR058C MSS2P40990 351 aa9.56□□□□□ -0.88
SHM2YLR058C OCA1P50946 238 aaPredicted RBP9.56□□□□□ -0.88
SHM2YLR058C ABZ2Q03266 374 aa9.56□□□□□ -0.88
SHM2YLR058C PAL1Q05518 499 aaKnown RBP9.56□□□□□ -0.88
SHM2YLR058C FMP40Q08968 688 aaPredicted RBP9.56□□□□□ -0.88
SHM2YLR058C HSP42Q12329 375 aa9.56□□□□□ -0.88
SHM2YLR058C CAR2P07991 424 aaKnown RBP9.55□□□□□ -0.88
SHM2YLR058C TFS1P14306 219 aa9.55□□□□□ -0.88
SHM2YLR058C ECM15P35195 104 aa9.55□□□□□ -0.88
SHM2YLR058C MCM7P38132 845 aa9.55□□□□□ -0.88
SHM2YLR058C YIL067CP40514 678 aa9.55□□□□□ -0.88
SHM2YLR058C SLD3P53135 668 aa9.55□□□□□ -0.88
SHM2YLR058C RSM10Q03201 203 aa9.55□□□□□ -0.88
SHM2YLR058C TLG1Q03322 224 aa9.55□□□□□ -0.88
SHM2YLR058C SEI1Q06058 285 aa9.55□□□□□ -0.88
SHM2YLR058C HAA1Q12753 694 aaKnown RBP9.55□□□□□ -0.88
SHM2YLR058C DET1Q99288 334 aaKnown RBP9.55□□□□□ -0.88
SHM2YLR058C FLP1P03870 423 aa9.54□□□□□ -0.88
SHM2YLR058C YOL162WP0CF19 215 aa9.54□□□□□ -0.88
SHM2YLR058C ARF1P11076 181 aaKnown RBP9.54□□□□□ -0.88
SHM2YLR058C ERD2P18414 219 aa9.54□□□□□ -0.88
SHM2YLR058C VPH2P32341 215 aa9.54□□□□□ -0.88
SHM2YLR058C SSZ1P38788 538 aaKnown RBP9.54□□□□□ -0.88
SHM2YLR058C NSG1P38837 291 aa9.54□□□□□ -0.88
SHM2YLR058C SOP4P39543 234 aaPredicted RBP9.54□□□□□ -0.88
SHM2YLR058C SWP82P43554 623 aa9.54□□□□□ -0.88
SHM2YLR058C CHA4P43634 648 aa9.54□□□□□ -0.88
SHM2YLR058C LSG1P53145 640 aaKnown RBP9.54□□□□□ -0.88
SHM2YLR058C COS1P53822 381 aa9.54□□□□□ -0.88
SHM2YLR058C GRX5Q02784 150 aa9.54□□□□□ -0.88
SHM2YLR058C YMD8Q03697 442 aa9.54□□□□□ -0.88
SHM2YLR058C YLR345WQ06137 509 aa9.54□□□□□ -0.88
SHM2YLR058C YOR376WQ08900 122 aa9.54□□□□□ -0.88
SHM2YLR058C TAD3Q9URQ3 322 aa9.54□□□□□ -0.88
SHM2YLR058C ADE5,7P07244 802 aaKnown RBP9.53□□□□□ -0.88
SHM2YLR058C SAM35P14693 329 aa9.53□□□□□ -0.88
SHM2YLR058C CNA1P23287 553 aa9.53□□□□□ -0.88
SHM2YLR058C HSP150P32478 413 aa9.53□□□□□ -0.88
SHM2YLR058C SHE4P51534 789 aa9.53□□□□□ -0.88
SHM2YLR058C SPO19Q03029 223 aa9.53□□□□□ -0.88
SHM2YLR058C NOP12Q08208 459 aaKnown RBP9.53□□□□□ -0.88
SHM2YLR058C PST2Q12335 198 aaKnown RBP9.53□□□□□ -0.88
SHM2YLR058C YOS9Q99220 542 aa9.53□□□□□ -0.88
SHM2YLR058C NCP1P16603 691 aaKnown RBP9.52□□□□□ -0.89
SHM2YLR058C SNF6P18888 332 aa9.52□□□□□ -0.89
SHM2YLR058C LDB16P25587 256 aa9.52□□□□□ -0.89
SHM2YLR058C LYP1P32487 611 aa9.52□□□□□ -0.89
SHM2YLR058C YKL077WP36081 392 aa9.52□□□□□ -0.89
SHM2YLR058C RRP4P38792 359 aaKnown RBP9.52□□□□□ -0.89
SHM2YLR058C AVT6P40074 448 aa9.52□□□□□ -0.89
SHM2YLR058C YNL208WP40159 199 aaKnown RBP9.52□□□□□ -0.89
SHM2YLR058C QRI7P43122 407 aa9.52□□□□□ -0.89
SHM2YLR058C IRC6P43615 237 aa9.52□□□□□ -0.89
SHM2YLR058C EXG2P52911 562 aa9.52□□□□□ -0.89
SHM2YLR058C TMA20P89886 181 aaPredicted RBP9.52□□□□□ -0.89
SHM2YLR058C ATG17Q06410 417 aa9.52□□□□□ -0.89
SHM2YLR058C CDA2Q06703 312 aa9.52□□□□□ -0.89
SHM2YLR058C SYO1Q07395 620 aa9.52□□□□□ -0.89
SHM2YLR058C SPC3Q12133 184 aa9.52□□□□□ -0.89
SHM2YLR058C DFG16Q99234 619 aa9.52□□□□□ -0.89
SHM2YLR058C MED11Q99278 115 aa9.52□□□□□ -0.89
SHM2YLR058C GLT1Q12680 2145 aaKnown RBP9.52□□□□□ -0.89
SHM2YLR058C MDL1P33310 695 aa9.51□□□□□ -0.89
SHM2YLR058C YLF2P38746 405 aa9.51□□□□□ -0.89
SHM2YLR058C APE4P38821 490 aa9.51□□□□□ -0.89
SHM2YLR058C HRB1P38922 454 aaKnown RBP RIP-Chip data9.51□□□□□ -0.89not detected
SHM2YLR058C IPT1P38954 527 aa9.51□□□□□ -0.89
SHM2YLR058C RBG2P53295 368 aaKnown RBP9.51□□□□□ -0.89
SHM2YLR058C ASI1P54074 624 aa9.51□□□□□ -0.89
SHM2YLR058C NUP53Q03790 475 aa9.51□□□□□ -0.89
SHM2YLR058C SEC13Q04491 297 aaKnown RBP9.51□□□□□ -0.89
SHM2YLR058C ERB1Q04660 807 aaKnown RBP9.51□□□□□ -0.89
SHM2YLR058C YPS7Q06325 596 aa9.51□□□□□ -0.89
SHM2YLR058C RAX1Q08760 435 aa9.51□□□□□ -0.89
SHM2YLR058C APC2Q12440 853 aa9.51□□□□□ -0.89
SHM2YLR058C OAC1P32332 324 aa9.5□□□□□ -0.89
SHM2YLR058C YME2P32843 850 aa9.5□□□□□ -0.89
SHM2YLR058C SEF1P34228 1148 aa9.5□□□□□ -0.89
SHM2YLR058C GOS1P38736 223 aa9.5□□□□□ -0.89
SHM2YLR058C YFR054CP43622 192 aa9.5□□□□□ -0.89
SHM2YLR058C IKS1P47042 667 aa9.5□□□□□ -0.89
SHM2YLR058C YGL235WP53071 178 aa9.5□□□□□ -0.89
SHM2YLR058C BUD9P53226 547 aa9.5□□□□□ -0.89
SHM2YLR058C RHO5P53879 331 aaKnown RBP9.5□□□□□ -0.89
SHM2YLR058C CUZ1P53899 274 aa9.5□□□□□ -0.89
SHM2YLR058C ATG21Q02887 496 aa9.5□□□□□ -0.89
SHM2YLR058C EKI1Q03764 534 aa9.5□□□□□ -0.89
SHM2YLR058C DCR2Q05924 578 aa9.5□□□□□ -0.89
SHM2YLR058C CYK3Q07533 885 aa9.5□□□□□ -0.89
SHM2YLR058C UIP4Q08926 304 aa9.5□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms