RNA–Protein interactions for RNA: YJL089W

SIP4, Transcript of C6 zinc cluster transcriptional activator, yeast

Gene SIP4, Length 2,490 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP4	YJL089W	APE4	P38821	490 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	NSG1	P38837	291 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	YHR177W	P38867	453 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	YJL193W	P39542	402 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	ARB1	P40024	610 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	IMA5	P40884	581 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	CIN1	P40987	1014 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	POP1	P41812	875 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	TDA10	P42938	290 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	SNO3	P43544	222 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	PGU1	P47180	361 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	UPF3	P48412	387 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	KEL2	P50090	882 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	YGR066C	P53242	292 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	MRPL19	P53875	158 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	YPL039W	Q03080	316 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	YMR102C	Q03177	834 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	FMN1	Q03778	218 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	RIM13	Q03792	727 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	SHE9	Q04172	456 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	YKU80	Q04437	629 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	YPR147C	Q06522	304 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	YEH2	Q07950	538 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	RRT8	Q08219	342 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	SGT1	Q08446	395 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	RPN6	Q12377	434 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	DBP10	Q12389	995 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	APC2	Q12440	853 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	PSF1	Q12488	208 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	SPO24	Q3E752	67 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	YPT6	Q99260	215 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	ATP2	P00830	511 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	ATP6	P00854	259 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	SUI3	P09064	285 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	ZWF1	P11412	505 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	UNG1	P12887	359 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	NCP1	P16603	691 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	KGD1	P20967	1014 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	AIM17	P23180	465 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	RPS1B	P23248	255 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	YCK1	P23291	538 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	RPC19	P28000	142 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	YIM1	P28625	365 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	ERG9	P29704	444 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	ZIP1	P31111	875 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	ASF2	P32448	525 aa	Predicted RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	PTR2	P32901	601 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	AUR1	P36107	401 aa	Predicted RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	YBL029W	P38201	376 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	ZTA1	P38230	334 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	1.05	□□□□□ -2.24	not detected
SIP4	YJL089W	YHR219W	P38900	624 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	YDR089W	P38966	869 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	FAA2	P39518	744 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	AIM2	P39721	246 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	RSP5	P39940	809 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	YER184C	P39961	794 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	YER010C	P40011	234 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	COG3	P40094	801 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	AVT7	P40501	490 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	SMK1	P41808	388 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	GDS1	P41913	522 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	UBP6	P43593	499 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	IDS2	P46958	469 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	MDE1	P47095	244 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	GPI8	P49018	411 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	MRK1	P50873	501 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	TWF1	P53250	332 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	TPC1	P53257	314 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	MAL12	P53341	584 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	DBP6	P53734	629 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	1.05	□□□□□ -2.24	not detected
SIP4	YJL089W	PET191	Q02772	108 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	RNY1	Q02933	434 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	MSC1	Q03104	513 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	SDC1	Q03323	175 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	RAD30	Q04049	632 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	PAL1	Q05518	499 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	GLO2	Q05584	274 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	CRR1	Q05790	422 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	FAR10	Q06001	478 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	MFG1	Q07684	458 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	PML1	Q07930	204 aa	Predicted RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	YLR036C	Q07986	203 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	RRG7	Q08774	242 aa	Predicted RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	MCP1	Q12106	302 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	YDL211C	Q12121	372 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	BAG7	Q12128	409 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	BSC1	Q12140	328 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	PRS5	Q12265	496 aa	Known RBP	1.05	□□□□□ -2.24
SIP4	YJL089W	WHI5	Q12416	295 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	MHF1	Q3E835	90 aa		1.05	□□□□□ -2.24
SIP4	YJL089W	STT4	P37297	1900 aa		1.04	□□□□□ -2.24
SIP4	YJL089W	TPK2	P06245	380 aa		1.04	□□□□□ -2.24
SIP4	YJL089W	PRB1	P09232	635 aa		1.04	□□□□□ -2.24
SIP4	YJL089W	SCO1	P23833	295 aa		1.04	□□□□□ -2.24
SIP4	YJL089W	CLB2	P24869	491 aa		1.04	□□□□□ -2.24
SIP4	YJL089W	IDH2	P28241	369 aa	Known RBP	1.04	□□□□□ -2.24
SIP4	YJL089W	NGG1	P32494	702 aa		1.04	□□□□□ -2.24
SIP4	YJL089W	TOA1	P32773	286 aa		1.04	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms