RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C PRP46Q12417 451 aaPredicted RBP3.25□□□□□ -1.89
VPS53YJL029C HTS1P07263 546 aaKnown RBP3.25□□□□□ -1.89
VPS53YJL029C YHR214C-DP0CX93 97 aa3.25□□□□□ -1.89
VPS53YJL029C FPS1P23900 669 aa3.25□□□□□ -1.89
VPS53YJL029C ATG15P25641 520 aa3.25□□□□□ -1.89
VPS53YJL029C EHD3P28817 500 aa3.25□□□□□ -1.89
VPS53YJL029C ATS1P31386 333 aa3.25□□□□□ -1.89
VPS53YJL029C NGG1P32494 702 aa3.25□□□□□ -1.89
VPS53YJL029C ZTA1P38230 334 aaKnown RBP3.25□□□□□ -1.89
VPS53YJL029C EXO84P38261 753 aa3.25□□□□□ -1.89
VPS53YJL029C YMR262WP38430 313 aa3.25□□□□□ -1.89
VPS53YJL029C ANS1P38832 159 aa3.25□□□□□ -1.89
VPS53YJL029C NSG1P38837 291 aa3.25□□□□□ -1.89
VPS53YJL029C PZF1P39933 429 aa3.25□□□□□ -1.89
VPS53YJL029C MRX1P40050 688 aa3.25□□□□□ -1.89
VPS53YJL029C MPH1P40562 993 aa3.25□□□□□ -1.89
VPS53YJL029C PHB1P40961 287 aa3.25□□□□□ -1.89
VPS53YJL029C CIN1P40987 1014 aa3.25□□□□□ -1.89
VPS53YJL029C YGR201CP42936 225 aa3.25□□□□□ -1.89
VPS53YJL029C YJR120WP47157 116 aa3.25□□□□□ -1.89
VPS53YJL029C UGO1Q03327 502 aa3.25□□□□□ -1.89
VPS53YJL029C RIM13Q03792 727 aa3.25□□□□□ -1.89
VPS53YJL029C GTB1Q04924 702 aa3.25□□□□□ -1.89
VPS53YJL029C GAS2Q06135 555 aa3.25□□□□□ -1.89
VPS53YJL029C SLF1Q12034 447 aaKnown RBP3.25□□□□□ -1.89
VPS53YJL029C YDL211CQ12121 372 aa3.25□□□□□ -1.89
VPS53YJL029C YDL177CQ12257 170 aa3.25□□□□□ -1.89
VPS53YJL029C HBN1Q96VH4 193 aa3.25□□□□□ -1.89
VPS53YJL029C RPP1AP05318 106 aaPredicted RBP3.24□□□□□ -1.89
VPS53YJL029C YFR010W-AP0C5N0 62 aa3.24□□□□□ -1.89
VPS53YJL029C ARF1P11076 181 aaKnown RBP3.24□□□□□ -1.89
VPS53YJL029C YAP1P19880 650 aaKnown RBP3.24□□□□□ -1.89
VPS53YJL029C KRE6P32486 720 aa3.24□□□□□ -1.89
VPS53YJL029C YPT7P32939 208 aa3.24□□□□□ -1.89
VPS53YJL029C MRPL16P38064 232 aa3.24□□□□□ -1.89
VPS53YJL029C RCY1P39531 840 aa3.24□□□□□ -1.89
VPS53YJL029C TWF1P53250 332 aa3.24□□□□□ -1.89
VPS53YJL029C COG2P53271 262 aa3.24□□□□□ -1.89
VPS53YJL029C MPA43P53583 542 aaPredicted RBP3.24□□□□□ -1.89
VPS53YJL029C YNR068CP53754 272 aa3.24□□□□□ -1.89
VPS53YJL029C RSC9Q03124 581 aa3.24□□□□□ -1.89
VPS53YJL029C SPC24Q04477 213 aa3.24□□□□□ -1.89
VPS53YJL029C NAT4Q04751 285 aa3.24□□□□□ -1.89
VPS53YJL029C SPO77Q06134 477 aa3.24□□□□□ -1.89
VPS53YJL029C ARO10Q06408 635 aa3.24□□□□□ -1.89
VPS53YJL029C ARG3P05150 338 aa3.24□□□□□ -1.89
VPS53YJL029C MSS18P08593 268 aa3.24□□□□□ -1.89
VPS53YJL029C SUI3P09064 285 aaKnown RBP3.24□□□□□ -1.89
VPS53YJL029C MER1P16523 270 aa3.24□□□□□ -1.89
VPS53YJL029C KGD1P20967 1014 aaKnown RBP3.24□□□□□ -1.89
VPS53YJL029C ASF2P32448 525 aaPredicted RBP3.24□□□□□ -1.89
VPS53YJL029C TOD6P34219 525 aa3.24□□□□□ -1.89
VPS53YJL029C RIB1P38066 345 aa3.24□□□□□ -1.89
VPS53YJL029C YBR241CP38142 488 aa3.24□□□□□ -1.89
VPS53YJL029C FAD1P38913 306 aa3.24□□□□□ -1.89
VPS53YJL029C YJL193WP39542 402 aa3.24□□□□□ -1.89
VPS53YJL029C SLS1P42900 643 aa3.24□□□□□ -1.89
VPS53YJL029C YPL107WQ02873 248 aa3.24□□□□□ -1.89
VPS53YJL029C SEI1Q06058 285 aa3.24□□□□□ -1.89
VPS53YJL029C MCP1Q12106 302 aa3.24□□□□□ -1.89
VPS53YJL029C APC2Q12440 853 aa3.24□□□□□ -1.89
VPS53YJL029C ATP2P00830 511 aaKnown RBP3.23□□□□□ -1.89
VPS53YJL029C ARG81P05085 880 aa3.23□□□□□ -1.89
VPS53YJL029C CBP6P07253 162 aaPredicted RBP3.23□□□□□ -1.89
VPS53YJL029C STE12P13574 688 aa3.23□□□□□ -1.89
VPS53YJL029C UGA1P17649 471 aa3.23□□□□□ -1.89
VPS53YJL029C BIG1P38813 335 aa3.23□□□□□ -1.89
VPS53YJL029C HSV2P50079 448 aaPredicted RBP3.23□□□□□ -1.89
VPS53YJL029C USE1P53146 245 aa3.23□□□□□ -1.89
VPS53YJL029C DBP6P53734 629 aaKnown RBP3.23□□□□□ -1.89
VPS53YJL029C DSL1P53847 754 aa3.23□□□□□ -1.89
VPS53YJL029C SEC13Q04491 297 aaKnown RBP3.23□□□□□ -1.89
VPS53YJL029C NOP12Q08208 459 aaKnown RBP3.23□□□□□ -1.89
VPS53YJL029C THP1Q08231 455 aa3.23□□□□□ -1.89
VPS53YJL029C RRG7Q08774 242 aaPredicted RBP3.23□□□□□ -1.89
VPS53YJL029C SOG2Q08817 791 aa3.23□□□□□ -1.89
VPS53YJL029C YOR378WQ08902 515 aa3.23□□□□□ -1.89
VPS53YJL029C YPR202WQ08993 238 aa3.23□□□□□ -1.89
VPS53YJL029C Q0144Q9ZZW2 109 aa3.23□□□□□ -1.89
VPS53YJL029C UTR1P21373 530 aa3.22□□□□□ -1.89
VPS53YJL029C YEF1P32622 495 aa3.22□□□□□ -1.89
VPS53YJL029C AFR1P33304 620 aa3.22□□□□□ -1.89
VPS53YJL029C GRE3P38715 327 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
VPS53YJL029C YHR218WP38899 603 aa3.22□□□□□ -1.89
VPS53YJL029C COG3P40094 801 aa3.22□□□□□ -1.89
VPS53YJL029C SOK2P53438 785 aaPredicted RBP3.22□□□□□ -1.89
VPS53YJL029C YDR541CQ03049 344 aa3.22□□□□□ -1.89
VPS53YJL029C YPL039WQ03080 316 aa3.22□□□□□ -1.89
VPS53YJL029C RCN2Q12044 265 aa3.22□□□□□ -1.89
VPS53YJL029C TMA17Q12513 150 aa3.22□□□□□ -1.89
VPS53YJL029C RPS21BQ3E754 87 aaKnown RBP3.22□□□□□ -1.89
VPS53YJL029C YOL163WP0CF20 169 aa3.22□□□□□ -1.89
VPS53YJL029C PDX1P16451 410 aa3.22□□□□□ -1.89
VPS53YJL029C AIM17P23180 465 aaKnown RBP3.22□□□□□ -1.89
VPS53YJL029C SCO1P23833 295 aa3.22□□□□□ -1.89
VPS53YJL029C CLB4P24871 460 aa3.22□□□□□ -1.89
VPS53YJL029C GFD2P25370 566 aaKnown RBP3.22□□□□□ -1.89
VPS53YJL029C DGR2P32330 852 aa3.22□□□□□ -1.89
VPS53YJL029C TFC1P32367 649 aa3.22□□□□□ -1.89
VPS53YJL029C PEX6P33760 1030 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms