RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C PRP18P33411 251 aaPredicted RBP3.09□□□□□ -1.91
YIR040CYIR040C MRPL4P36517 319 aa3.09□□□□□ -1.91
YIR040CYIR040C MRPL24P36525 258 aaPredicted RBP3.09□□□□□ -1.91
YIR040CYIR040C ZTA1P38230 334 aaKnown RBP3.09□□□□□ -1.91
YIR040CYIR040C PCA1P38360 1216 aa3.09□□□□□ -1.91
YIR040CYIR040C FAD1P38913 306 aa3.09□□□□□ -1.91
YIR040CYIR040C DHH1P39517 506 aaKnown RBP3.09□□□□□ -1.91
YIR040CYIR040C RBG1P39729 369 aa3.09□□□□□ -1.91
YIR040CYIR040C YER121WP40076 114 aa3.09□□□□□ -1.91
YIR040CYIR040C ARG2P40360 574 aa3.09□□□□□ -1.91
YIR040CYIR040C YKE4P40544 346 aa3.09□□□□□ -1.91
YIR040CYIR040C MET28P40573 187 aa3.09□□□□□ -1.91
YIR040CYIR040C OPT1P40897 799 aa3.09□□□□□ -1.91
YIR040CYIR040C GDS1P41913 522 aa3.09□□□□□ -1.91
YIR040CYIR040C ARC1P46672 376 aaKnown RBP3.09□□□□□ -1.91
YIR040CYIR040C YAR1P46683 200 aa3.09□□□□□ -1.91
YIR040CYIR040C BIT61P47041 543 aa3.09□□□□□ -1.91
YIR040CYIR040C YAE1P47118 141 aaPredicted RBP3.09□□□□□ -1.91
YIR040CYIR040C ADO1P47143 340 aaKnown RBP3.09□□□□□ -1.91
YIR040CYIR040C JHD2P47156 728 aaPredicted RBP3.09□□□□□ -1.91
YIR040CYIR040C RFX1P48743 811 aa3.09□□□□□ -1.91
YIR040CYIR040C CTF18P49956 741 aa3.09□□□□□ -1.91
YIR040CYIR040C PHB2P50085 310 aa3.09□□□□□ -1.91
YIR040CYIR040C YPT32P51996 222 aaKnown RBP3.09□□□□□ -1.91
YIR040CYIR040C YGL235WP53071 178 aa3.09□□□□□ -1.91
YIR040CYIR040C COG1P53079 417 aa3.09□□□□□ -1.91
YIR040CYIR040C GPI1P53306 609 aa3.09□□□□□ -1.91
YIR040CYIR040C YNR062CP53748 327 aa3.09□□□□□ -1.91
YIR040CYIR040C YNL143CP53908 130 aa3.09□□□□□ -1.91
YIR040CYIR040C TRS31Q03337 283 aa3.09□□□□□ -1.91
YIR040CYIR040C OST6Q03723 332 aa3.09□□□□□ -1.91
YIR040CYIR040C VHS1Q03785 461 aa3.09□□□□□ -1.91
YIR040CYIR040C HLR1Q04429 423 aa3.09□□□□□ -1.91
YIR040CYIR040C RRP45Q05636 305 aaKnown RBP3.09□□□□□ -1.91
YIR040CYIR040C YPS7Q06325 596 aa3.09□□□□□ -1.91
YIR040CYIR040C AAD4Q07747 329 aa3.09□□□□□ -1.91
YIR040CYIR040C PAM18Q07914 168 aa3.09□□□□□ -1.91
YIR040CYIR040C SGT1Q08446 395 aa3.09□□□□□ -1.91
YIR040CYIR040C SRL2Q12020 392 aa3.09□□□□□ -1.91
YIR040CYIR040C TMS1Q12116 473 aa3.09□□□□□ -1.91
YIR040CYIR040C NMD4Q12129 218 aa3.09□□□□□ -1.91
YIR040CYIR040C GET3Q12154 354 aaKnown RBP3.09□□□□□ -1.91
YIR040CYIR040C YPR063CQ12160 140 aa3.09□□□□□ -1.91
YIR040CYIR040C MRX4Q12467 430 aa3.09□□□□□ -1.91
YIR040CYIR040C DCP1Q12517 231 aaPredicted RBP3.09□□□□□ -1.91
YIR040CYIR040C YIR021W-AQ3E739 70 aa3.09□□□□□ -1.91
YIR040CYIR040C YLR361C-AQ3E795 98 aa3.09□□□□□ -1.91
YIR040CYIR040C YOR111WQ99210 232 aa3.09□□□□□ -1.91
YIR040CYIR040C RAD10P06838 210 aa3.08□□□□□ -1.92
YIR040CYIR040C LPD1P09624 499 aaKnown RBP3.08□□□□□ -1.92
YIR040CYIR040C IMA3P0CW40 589 aa3.08□□□□□ -1.92
YIR040CYIR040C IMA4P0CW41 589 aa3.08□□□□□ -1.92
YIR040CYIR040C SEC59P20048 519 aa3.08□□□□□ -1.92
YIR040CYIR040C MEK1P24719 497 aaPredicted RBP3.08□□□□□ -1.92
YIR040CYIR040C PET127P32606 800 aa3.08□□□□□ -1.92
YIR040CYIR040C SOF1P33750 489 aaKnown RBP3.08□□□□□ -1.92
YIR040CYIR040C TIP20P33891 701 aa3.08□□□□□ -1.92
YIR040CYIR040C PTC1P35182 281 aa3.08□□□□□ -1.92
YIR040CYIR040C CLG1P35190 452 aa3.08□□□□□ -1.92
YIR040CYIR040C FLO10P36170 1169 aa3.08□□□□□ -1.92
YIR040CYIR040C VID24P38263 362 aa3.08□□□□□ -1.92
YIR040CYIR040C YPT31P38555 223 aaKnown RBP3.08□□□□□ -1.92
YIR040CYIR040C COS8P38723 381 aa3.08□□□□□ -1.92
YIR040CYIR040C VMA7P39111 118 aa3.08□□□□□ -1.92
YIR040CYIR040C BDH1P39714 382 aa3.08□□□□□ -1.92
YIR040CYIR040C IDP2P41939 412 aa3.08□□□□□ -1.92
YIR040CYIR040C TRS85P46944 698 aa3.08□□□□□ -1.92
YIR040CYIR040C GPI14P47088 403 aaKnown RBP3.08□□□□□ -1.92
YIR040CYIR040C EFM3P47163 339 aa3.08□□□□□ -1.92
YIR040CYIR040C CTR1P49573 406 aa3.08□□□□□ -1.92
YIR040CYIR040C SOL1P50278 321 aa3.08□□□□□ -1.92
YIR040CYIR040C SWC4P53201 476 aa3.08□□□□□ -1.92
YIR040CYIR040C YGR151CP53287 111 aa3.08□□□□□ -1.92
YIR040CYIR040C RTT102P53330 157 aa3.08□□□□□ -1.92
YIR040CYIR040C YIP3P53633 176 aa3.08□□□□□ -1.92
YIR040CYIR040C DBP6P53734 629 aaKnown RBP3.08□□□□□ -1.92
YIR040CYIR040C ECM9Q02202 377 aa3.08□□□□□ -1.92
YIR040CYIR040C SNO1Q03144 224 aa3.08□□□□□ -1.92
YIR040CYIR040C MTG1Q03151 367 aaPredicted RBP3.08□□□□□ -1.92
YIR040CYIR040C PFA5Q03289 374 aa3.08□□□□□ -1.92
YIR040CYIR040C SNO4Q04902 237 aa3.08□□□□□ -1.92
YIR040CYIR040C RQC1Q05468 723 aaKnown RBP3.08□□□□□ -1.92
YIR040CYIR040C COA4Q05809 96 aa3.08□□□□□ -1.92
YIR040CYIR040C PRP11Q07350 266 aaPredicted RBP3.08□□□□□ -1.92
YIR040CYIR040C IMA2Q08295 589 aa3.08□□□□□ -1.92
YIR040CYIR040C FEX1Q08913 375 aa3.08□□□□□ -1.92
YIR040CYIR040C HSP33Q08914 237 aaKnown RBP3.08□□□□□ -1.92
YIR040CYIR040C HSP32Q08992 237 aa3.08□□□□□ -1.92
YIR040CYIR040C POM33Q12164 279 aa3.08□□□□□ -1.92
YIR040CYIR040C ATG31Q12421 196 aa3.08□□□□□ -1.92
YIR040CYIR040C POM34Q12445 299 aa3.08□□□□□ -1.92
YIR040CYIR040C SAS5Q99314 248 aa3.08□□□□□ -1.92
YIR040CYIR040C KRE5P22023 1365 aa3.08□□□□□ -1.92
YIR040CYIR040C IRC20Q06554 1556 aa3.08□□□□□ -1.92
YIR040CYIR040C ILV5P06168 395 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C CDC21P06785 304 aa3.07□□□□□ -1.92
YIR040CYIR040C CDC33P07260 213 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C SNF3P10870 884 aa3.07□□□□□ -1.92
YIR040CYIR040C YPK1P12688 680 aaKnown RBP3.07□□□□□ -1.92
YIR040CYIR040C URA6P15700 204 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 75.5 ms