RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C IRC6P43615 237 aa3.33□□□□□ -1.88
SSM4YIL030C TMN2Q04562 672 aa3.33□□□□□ -1.88
SSM4YIL030C SSL1Q04673 461 aaPredicted RBP3.33□□□□□ -1.88
SSM4YIL030C ISR1Q06098 443 aaKnown RBP3.33□□□□□ -1.88
SSM4YIL030C CDA2Q06703 312 aa3.33□□□□□ -1.88
SSM4YIL030C DBP10Q12389 995 aaKnown RBP3.33□□□□□ -1.88
SSM4YIL030C YEL009C-AA0A023PZF2 135 aa3.33□□□□□ -1.88
SSM4YIL030C YBR085C-AO43137 85 aa3.33□□□□□ -1.88
SSM4YIL030C RPL6BP05739 176 aaKnown RBP3.33□□□□□ -1.88
SSM4YIL030C RED1P14291 827 aa3.33□□□□□ -1.88
SSM4YIL030C DAL81P21657 970 aa3.33□□□□□ -1.88
SSM4YIL030C PRE9P23638 258 aaKnown RBP3.33□□□□□ -1.88
SSM4YIL030C GCD11P32481 527 aaKnown RBP3.33□□□□□ -1.88
SSM4YIL030C MKK1P32490 508 aa3.33□□□□□ -1.88
SSM4YIL030C PAU2P32612 120 aa3.33□□□□□ -1.88
SSM4YIL030C PAC1P39946 494 aaKnown RBP3.33□□□□□ -1.88
SSM4YIL030C DPB11P47027 764 aaPredicted RBP3.33□□□□□ -1.88
SSM4YIL030C MDE1P47095 244 aa3.33□□□□□ -1.88
SSM4YIL030C HAM1P47119 197 aaKnown RBP3.33□□□□□ -1.88
SSM4YIL030C CSN12P47130 423 aa3.33□□□□□ -1.88
SSM4YIL030C NIF3P53081 288 aa3.33□□□□□ -1.88
SSM4YIL030C SMA2Q04658 369 aa3.33□□□□□ -1.88
SSM4YIL030C YOR283WQ12040 230 aaKnown RBP3.33□□□□□ -1.88
SSM4YIL030C MCM1P11746 286 aa3.33□□□□□ -1.88
SSM4YIL030C PRO1P32264 428 aa3.33□□□□□ -1.88
SSM4YIL030C NDC1P32500 655 aa3.33□□□□□ -1.88
SSM4YIL030C KAP122P32767 1081 aa3.33□□□□□ -1.88
SSM4YIL030C MRT4P33201 236 aaKnown RBP3.33□□□□□ -1.88
SSM4YIL030C SDS22P36047 338 aa3.33□□□□□ -1.88
SSM4YIL030C CHS7P38843 316 aa3.33□□□□□ -1.88
SSM4YIL030C LYS12P40495 371 aaKnown RBP3.33□□□□□ -1.88
SSM4YIL030C BUD8P41698 603 aa3.33□□□□□ -1.88
SSM4YIL030C COS12P53053 380 aa3.33□□□□□ -1.88
SSM4YIL030C YGR127WP53275 312 aa3.33□□□□□ -1.88
SSM4YIL030C ROT1Q03691 256 aa3.33□□□□□ -1.88
SSM4YIL030C HPT1Q04178 221 aaKnown RBP3.33□□□□□ -1.88
SSM4YIL030C MSC6Q08818 692 aaKnown RBP3.33□□□□□ -1.88
SSM4YIL030C AKR2Q12013 749 aa3.33□□□□□ -1.88
SSM4YIL030C TGL5Q12043 749 aa3.33□□□□□ -1.88
SSM4YIL030C CYR1P08678 2026 aaKnown RBP3.32□□□□□ -1.88
SSM4YIL030C YPK2P18961 677 aa3.32□□□□□ -1.88
SSM4YIL030C STP22P25604 385 aa3.32□□□□□ -1.88
SSM4YIL030C ASC1P38011 319 aaKnown RBP3.32□□□□□ -1.88
SSM4YIL030C HEM14P40012 539 aa3.32□□□□□ -1.88
SSM4YIL030C AIM23P47015 356 aa3.32□□□□□ -1.88
SSM4YIL030C SPT20P50875 604 aa3.32□□□□□ -1.88
SSM4YIL030C PPT1P53043 513 aa3.32□□□□□ -1.88
SSM4YIL030C MDM34P53083 459 aa3.32□□□□□ -1.88
SSM4YIL030C HHT1P61830 136 aa3.32□□□□□ -1.88
SSM4YIL030C YPL113CQ02961 396 aa3.32□□□□□ -1.88
SSM4YIL030C PIR1Q03178 341 aa3.32□□□□□ -1.88
SSM4YIL030C TAF12Q03761 539 aa3.32□□□□□ -1.88
SSM4YIL030C MRPL1Q04599 285 aa3.32□□□□□ -1.88
SSM4YIL030C RTN1Q04947 295 aaKnown RBP3.32□□□□□ -1.88
SSM4YIL030C GLE1Q12315 538 aa3.32□□□□□ -1.88
SSM4YIL030C AFI1Q99222 893 aa3.32□□□□□ -1.88
SSM4YIL030C INH1P01097 85 aa3.32□□□□□ -1.88
SSM4YIL030C HOP09932 586 aa3.32□□□□□ -1.88
SSM4YIL030C RSM22P36056 628 aa3.32□□□□□ -1.88
SSM4YIL030C MLH1P38920 769 aa3.32□□□□□ -1.88
SSM4YIL030C YGR079WP53249 370 aa3.32□□□□□ -1.88
SSM4YIL030C SYF2P53277 215 aaPredicted RBP3.32□□□□□ -1.88
SSM4YIL030C GOR1P53839 350 aa3.32□□□□□ -1.88
SSM4YIL030C APJ1P53940 528 aa3.32□□□□□ -1.88
SSM4YIL030C MDM30Q05930 598 aa3.32□□□□□ -1.88
SSM4YIL030C AIM7Q12156 149 aa3.32□□□□□ -1.88
SSM4YIL030C INP53Q12271 1107 aa3.32□□□□□ -1.88
SSM4YIL030C YBR298C-AQ8TGK4 73 aa3.32□□□□□ -1.88
SSM4YIL030C FUB1P25659 250 aa3.32□□□□□ -1.88
SSM4YIL030C ITR1P30605 584 aa3.32□□□□□ -1.88
SSM4YIL030C FAA1P30624 700 aaKnown RBP3.32□□□□□ -1.88
SSM4YIL030C ERG24P32462 438 aaKnown RBP3.32□□□□□ -1.88
SSM4YIL030C PUB1P32588 453 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88 RIP-Chip
SSM4YIL030C YPT35P38815 214 aaKnown RBP3.32□□□□□ -1.88
SSM4YIL030C NSG1P38837 291 aa3.32□□□□□ -1.88
SSM4YIL030C AIM14P53109 570 aa3.32□□□□□ -1.88
SSM4YIL030C YCL001W-AP87012 153 aa3.32□□□□□ -1.88
SSM4YIL030C ATC1Q04005 294 aa3.32□□□□□ -1.88
SSM4YIL030C SIZ1Q04195 904 aa3.32□□□□□ -1.88
SSM4YIL030C YLR455WQ06188 304 aa3.32□□□□□ -1.88
SSM4YIL030C CYK3Q07533 885 aa3.32□□□□□ -1.88
SSM4YIL030C YPL272CQ08984 517 aa3.32□□□□□ -1.88
SSM4YIL030C WHI5Q12416 295 aa3.32□□□□□ -1.88
SSM4YIL030C COX19Q3E731 98 aa3.32□□□□□ -1.88
SSM4YIL030C ZWF1P11412 505 aaKnown RBP3.31□□□□□ -1.88
SSM4YIL030C SEC2P17065 759 aa3.31□□□□□ -1.88
SSM4YIL030C RPB4P20433 221 aaPredicted RBP3.31□□□□□ -1.88
SSM4YIL030C PMT2P31382 759 aa3.31□□□□□ -1.88
SSM4YIL030C SFP1P32432 683 aa3.31□□□□□ -1.88
SSM4YIL030C FMT1P32785 401 aa3.31□□□□□ -1.88
SSM4YIL030C PTH2P34222 208 aa3.31□□□□□ -1.88
SSM4YIL030C TSA1P34760 196 aaKnown RBP3.31□□□□□ -1.88
SSM4YIL030C YHR097CP38809 366 aaKnown RBP3.31□□□□□ -1.88
SSM4YIL030C MBP1P39678 833 aa3.31□□□□□ -1.88
SSM4YIL030C PZF1P39933 429 aa3.31□□□□□ -1.88
SSM4YIL030C QDR1P40475 563 aa3.31□□□□□ -1.88
SSM4YIL030C YIL089WP40500 205 aa3.31□□□□□ -1.88
SSM4YIL030C PHS1P40857 217 aa3.31□□□□□ -1.88
SSM4YIL030C CAF16P43569 289 aa3.31□□□□□ -1.88
SSM4YIL030C AMA1P50082 593 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms