RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W YKR015CP36111 568 aa3.17□□□□□ -1.9
PRP18YGR006W YHR122WP38829 231 aa3.17□□□□□ -1.9
PRP18YGR006W PES4P39684 611 aa3.17□□□□□ -1.9
PRP18YGR006W CIN2P46670 268 aa3.17□□□□□ -1.9
PRP18YGR006W YLH47Q06493 454 aa3.17□□□□□ -1.9
PRP18YGR006W PML1Q07930 204 aaPredicted RBP3.17□□□□□ -1.9
PRP18YGR006W AIM45Q12480 344 aaKnown RBP3.17□□□□□ -1.9
PRP18YGR006W HEM4P06174 275 aa3.16□□□□□ -1.9
PRP18YGR006W RPS16AP0CX51 143 aaKnown RBP3.16□□□□□ -1.9
PRP18YGR006W RPS16BP0CX52 143 aaKnown RBP3.16□□□□□ -1.9
PRP18YGR006W ZRC1P20107 442 aa3.16□□□□□ -1.9
PRP18YGR006W SAG1P20840 650 aa3.16□□□□□ -1.9
PRP18YGR006W ANP1P32629 500 aa3.16□□□□□ -1.9
PRP18YGR006W PRS1P32895 427 aaKnown RBP3.16□□□□□ -1.9
PRP18YGR006W PTK1P36002 662 aaPredicted RBP3.16□□□□□ -1.9
PRP18YGR006W RBG1P39729 369 aa3.16□□□□□ -1.9
PRP18YGR006W SMP3Q04174 516 aa3.16□□□□□ -1.9
PRP18YGR006W MSC3Q05812 728 aa3.16□□□□□ -1.9
PRP18YGR006W YOL075CQ08234 1294 aa3.16□□□□□ -1.9
PRP18YGR006W YDL109CQ12103 647 aa3.16□□□□□ -1.9
PRP18YGR006W SFM1Q12314 213 aa3.16□□□□□ -1.9
PRP18YGR006W YOR012WQ12351 137 aa3.16□□□□□ -1.9
PRP18YGR006W PRB1P09232 635 aa3.15□□□□□ -1.91
PRP18YGR006W HSP26P15992 214 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
PRP18YGR006W CKI1P20485 582 aa3.15□□□□□ -1.91
PRP18YGR006W PCL1P24867 279 aa3.15□□□□□ -1.91
PRP18YGR006W CHA1P25379 360 aaKnown RBP3.15□□□□□ -1.91
PRP18YGR006W LDS1P31379 325 aa3.15□□□□□ -1.91
PRP18YGR006W IES6P32617 166 aa3.15□□□□□ -1.91
PRP18YGR006W TIM17P39515 158 aa3.15□□□□□ -1.91
PRP18YGR006W KEG1P43614 200 aa3.15□□□□□ -1.91
PRP18YGR006W CTK3P46963 296 aaPredicted RBP3.15□□□□□ -1.91
PRP18YGR006W YHC3P47040 408 aa3.15□□□□□ -1.91
PRP18YGR006W LST7P53237 242 aa3.15□□□□□ -1.91
PRP18YGR006W HST1P53685 503 aa3.15□□□□□ -1.91
PRP18YGR006W TSA2Q04120 196 aa3.15□□□□□ -1.91
PRP18YGR006W YHC1Q05900 231 aaKnown RBP3.15□□□□□ -1.91
PRP18YGR006W ARR1Q06596 294 aa3.15□□□□□ -1.91
PRP18YGR006W DET1Q99288 334 aaKnown RBP3.15□□□□□ -1.91
PRP18YGR006W ARF2P19146 181 aaKnown RBP3.14□□□□□ -1.91
PRP18YGR006W FAR1P21268 830 aa3.14□□□□□ -1.91
PRP18YGR006W KRR1P25586 316 aaPredicted RBP3.14□□□□□ -1.91
PRP18YGR006W UTH1P36135 365 aa3.14□□□□□ -1.91
PRP18YGR006W GPI18P38211 433 aa3.14□□□□□ -1.91
PRP18YGR006W YPT35P38815 214 aaKnown RBP3.14□□□□□ -1.91
PRP18YGR006W PFS1P38872 237 aa3.14□□□□□ -1.91
PRP18YGR006W YMR134WP40207 237 aa3.14□□□□□ -1.91
PRP18YGR006W MEP1P40260 492 aa3.14□□□□□ -1.91
PRP18YGR006W NAS2P40555 220 aa3.14□□□□□ -1.91
PRP18YGR006W GPI8P49018 411 aa3.14□□□□□ -1.91
PRP18YGR006W FSH2Q05015 223 aa3.14□□□□□ -1.91
PRP18YGR006W APC5Q08683 685 aa3.14□□□□□ -1.91
PRP18YGR006W UBA3Q99344 299 aa3.14□□□□□ -1.91
PRP18YGR006W COX4P04037 155 aa3.13□□□□□ -1.91
PRP18YGR006W RPL23AP0CX41 137 aaKnown RBP3.13□□□□□ -1.91
PRP18YGR006W RPL23BP0CX42 137 aaKnown RBP3.13□□□□□ -1.91
PRP18YGR006W TRX1P22217 103 aaKnown RBP3.13□□□□□ -1.91
PRP18YGR006W HXT2P23585 541 aa3.13□□□□□ -1.91
PRP18YGR006W MRPS5P33759 307 aa3.13□□□□□ -1.91
PRP18YGR006W SOL2P37262 315 aa3.13□□□□□ -1.91
PRP18YGR006W BMT2P38278 337 aa3.13□□□□□ -1.91
PRP18YGR006W IGD1P43598 195 aa3.13□□□□□ -1.91
PRP18YGR006W YJR030CP47101 745 aa3.13□□□□□ -1.91
PRP18YGR006W PRP38Q00723 242 aaPredicted RBP3.13□□□□□ -1.91
PRP18YGR006W NAT4Q04751 285 aa3.13□□□□□ -1.91
PRP18YGR006W MCT1Q12283 360 aa3.13□□□□□ -1.91
PRP18YGR006W RGS2Q99188 309 aa3.13□□□□□ -1.91
PRP18YGR006W YLL053CP0CD98 152 aa3.12□□□□□ -1.91
PRP18YGR006W MXR2P25566 168 aa3.12□□□□□ -1.91
PRP18YGR006W EBP2P36049 427 aaKnown RBP3.12□□□□□ -1.91
PRP18YGR006W ALP1P38971 573 aa3.12□□□□□ -1.91
PRP18YGR006W SHE4P51534 789 aa3.12□□□□□ -1.91
PRP18YGR006W YGL114WP53134 725 aa3.12□□□□□ -1.91
PRP18YGR006W VHT1P53241 593 aa3.12□□□□□ -1.91
PRP18YGR006W YNL146WP53906 100 aa3.12□□□□□ -1.91
PRP18YGR006W VAC7P53950 1165 aa3.12□□□□□ -1.91
PRP18YGR006W TLG1Q03322 224 aa3.12□□□□□ -1.91
PRP18YGR006W MGR3Q04472 501 aa3.12□□□□□ -1.91
PRP18YGR006W DNL4Q08387 944 aaPredicted RBP3.12□□□□□ -1.91
PRP18YGR006W FOL3Q12676 427 aaPredicted RBP3.12□□□□□ -1.91
PRP18YGR006W PSK1P31374 1356 aa3.12□□□□□ -1.91
PRP18YGR006W CMK2P22517 447 aa3.11□□□□□ -1.91
PRP18YGR006W ZUO1P32527 433 aaKnown RBP3.11□□□□□ -1.91
PRP18YGR006W COS9P36034 407 aa3.11□□□□□ -1.91
PRP18YGR006W IST2P38250 946 aa3.11□□□□□ -1.91
PRP18YGR006W ATG7P38862 630 aa3.11□□□□□ -1.91
PRP18YGR006W ALD5P40047 520 aaKnown RBP3.11□□□□□ -1.91
PRP18YGR006W MKC7P53379 596 aa3.11□□□□□ -1.91
PRP18YGR006W KTR6P54070 446 aa3.11□□□□□ -1.91
PRP18YGR006W MRPS16Q02608 121 aa3.11□□□□□ -1.91
PRP18YGR006W ENT5Q03769 411 aaKnown RBP3.11□□□□□ -1.91
PRP18YGR006W VTI1Q04338 217 aa3.11□□□□□ -1.91
PRP18YGR006W GAS2Q06135 555 aa3.11□□□□□ -1.91
PRP18YGR006W ATP16Q12165 160 aa3.11□□□□□ -1.91
PRP18YGR006W SOD1P00445 154 aaKnown RBP3.1□□□□□ -1.91
PRP18YGR006W RNR2P09938 399 aaKnown RBP3.1□□□□□ -1.91
PRP18YGR006W MIR1P23641 311 aaKnown RBP3.1□□□□□ -1.91
PRP18YGR006W SRB2P34162 210 aa3.1□□□□□ -1.91
PRP18YGR006W MRP21P38175 177 aa3.1□□□□□ -1.91
PRP18YGR006W PEX32P38292 413 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms