RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMC1	YGL006W	PGS1	P25578	521 aa		4	□□□□□ -1.77
PMC1	YGL006W	GLC3	P32775	704 aa		4	□□□□□ -1.77
PMC1	YGL006W	GPT2	P36148	743 aa		4	□□□□□ -1.77
PMC1	YGL006W	CHL4	P38907	458 aa		4	□□□□□ -1.77
PMC1	YGL006W	MEP1	P40260	492 aa		4	□□□□□ -1.77
PMC1	YGL006W	DPB11	P47027	764 aa	Predicted RBP	4	□□□□□ -1.77
PMC1	YGL006W	MUP1	P50276	574 aa		4	□□□□□ -1.77
PMC1	YGL006W	MSS11	Q03825	758 aa		4	□□□□□ -1.77
PMC1	YGL006W	ARO10	Q06408	635 aa		4	□□□□□ -1.77
PMC1	YGL006W	TPO3	Q06451	622 aa		4	□□□□□ -1.77
PMC1	YGL006W	FCF2	Q12035	217 aa	Predicted RBP	4	□□□□□ -1.77
PMC1	YGL006W	YOR012W	Q12351	137 aa		4	□□□□□ -1.77
PMC1	YGL006W	YGR161W-C	Q3E744	92 aa		4	□□□□□ -1.77
PMC1	YGL006W	CMC2	Q3E7A4	109 aa		4	□□□□□ -1.77
PMC1	YGL006W	YCL012C	Q8J0M4	134 aa		4	□□□□□ -1.77
PMC1	YGL006W	FIG2	P25653	1609 aa		4	□□□□□ -1.77
PMC1	YGL006W	NCP1	P16603	691 aa	Known RBP	3.99	□□□□□ -1.77
PMC1	YGL006W	UTR1	P21373	530 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	RSC6	P25632	483 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	SPT10	P35208	640 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	CBT1	P36038	271 aa	Predicted RBP	3.99	□□□□□ -1.77
PMC1	YGL006W	SWM2	P40342	146 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	KTR7	P40504	517 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	HIS6	P40545	261 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	AAD14	P42884	376 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	UBX6	P47049	396 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	YGL159W	P53110	370 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	PEF1	P53238	335 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	YGR067C	P53243	804 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	MKC7	P53379	596 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	CYK3	Q07533	885 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	BMT6	Q12291	365 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	CDC9	P04819	755 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	ADK1	P07170	222 aa	Known RBP	3.99	□□□□□ -1.77
PMC1	YGL006W	ERD2	P18414	219 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	CKS1	P20486	150 aa	Known RBP	3.99	□□□□□ -1.77
PMC1	YGL006W	STE50	P25344	346 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	ITR1	P30605	584 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	MET22	P32179	357 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	MAC1	P35192	417 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	MGE1	P38523	228 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	COS8	P38723	381 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	NTA1	P40354	457 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	SNG1	P46950	547 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	YHC3	P47040	408 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	YJR030C	P47101	745 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	ROG1	P53118	685 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	YGR042W	P53227	271 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	SKO1	Q02100	647 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	YPL113C	Q02961	396 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	PLB2	Q03674	706 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	RRN11	Q04712	507 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	ASR1	Q06834	288 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	RRT8	Q08219	342 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.99	□□□□□ -1.77
PMC1	YGL006W	SPT3	P06844	337 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	PHO80	P20052	293 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	LIP5	P32875	414 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	POL12	P38121	705 aa	Predicted RBP	3.99	□□□□□ -1.77
PMC1	YGL006W	YBR238C	P38330	731 aa	Known RBP	3.99	□□□□□ -1.77
PMC1	YGL006W	MTC4	P38335	694 aa	Known RBP	3.99	□□□□□ -1.77
PMC1	YGL006W	LRP1	P38801	184 aa	Known RBP	3.99	□□□□□ -1.77
PMC1	YGL006W	YEL073C	P39974	107 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	IST3	P40565	148 aa	Predicted RBP	3.99	□□□□□ -1.77
PMC1	YGL006W	PFS2	P42841	465 aa	Known RBP	3.99	□□□□□ -1.77
PMC1	YGL006W	HOS2	P53096	452 aa	Predicted RBP	3.99	□□□□□ -1.77
PMC1	YGL006W	COG7	P53195	279 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	COQ6	P53318	479 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	MEP3	P53390	489 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	KAP120	Q02932	1032 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	SNX41	Q04053	625 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	DCR2	Q05924	578 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	NDD1	Q08887	554 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	MRX4	Q12467	430 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	MHT1	Q12525	324 aa		3.99	□□□□□ -1.77
PMC1	YGL006W	GAL80	P04387	435 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	PPH22	P23595	377 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
PMC1	YGL006W	SUA5	P32579	426 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	PPG1	P32838	368 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	YPT52	P36018	234 aa	Known RBP	3.98	□□□□□ -1.77
PMC1	YGL006W	FLO10	P36170	1169 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	APL3	P38065	1025 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	TCM62	P38228	572 aa	Known RBP	3.98	□□□□□ -1.77
PMC1	YGL006W	PCL5	P38794	229 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	GEP4	P38812	185 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	QDR2	P40474	542 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	GTS1	P40956	396 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	AMA1	P50082	593 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	MNN10	P50108	393 aa	Known RBP	3.98	□□□□□ -1.77
PMC1	YGL006W	DOC1	P53068	250 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	KXD1	P53158	218 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	YAP1802	P53309	568 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	YDR541C	Q03049	344 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	SWF1	Q04629	336 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	SEN15	Q04675	128 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	NMA1	Q06178	401 aa	Known RBP	3.98	□□□□□ -1.77
PMC1	YGL006W	AEP3	Q12089	606 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	YPL066W	Q12194	479 aa		3.98	□□□□□ -1.77
PMC1	YGL006W	YOL114C	Q12322	202 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 66.5 ms