RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	SSC1	P0CS90	654 aa	Known RBP	5.09	□□□□□ -1.59
SNF11	YDR073W	CAP2	P13517	287 aa		5.09	□□□□□ -1.59
SNF11	YDR073W	RVS161	P25343	265 aa	Known RBP	5.09	□□□□□ -1.59
SNF11	YDR073W	PRR1	P28708	518 aa		5.09	□□□□□ -1.59
SNF11	YDR073W	CAB3	P36076	571 aa		5.09	□□□□□ -1.59
SNF11	YDR073W	YKR015C	P36111	568 aa		5.09	□□□□□ -1.59
SNF11	YDR073W	CHK1	P38147	527 aa		5.09	□□□□□ -1.59
SNF11	YDR073W	KEG1	P43614	200 aa		5.09	□□□□□ -1.59
SNF11	YDR073W	PGA2	P53903	129 aa		5.09	□□□□□ -1.59
SNF11	YDR073W	ERP3	Q12403	225 aa		5.09	□□□□□ -1.59
SNF11	YDR073W	SET6	Q12529	373 aa		5.09	□□□□□ -1.59
SNF11	YDR073W	CSR2	Q12734	1121 aa		5.09	□□□□□ -1.59
SNF11	YDR073W	QCR6	P00127	147 aa		5.08	□□□□□ -1.6
SNF11	YDR073W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
SNF11	YDR073W	RAD3	P06839	778 aa		5.08	□□□□□ -1.6
SNF11	YDR073W	POL30	P15873	258 aa	Known RBP	5.08	□□□□□ -1.6
SNF11	YDR073W	SLY1	P22213	666 aa		5.08	□□□□□ -1.6
SNF11	YDR073W	MRPL25	P23369	157 aa		5.08	□□□□□ -1.6
SNF11	YDR073W	EXG1	P23776	448 aa	Known RBP	5.08	□□□□□ -1.6
SNF11	YDR073W	CWP1	P28319	239 aa		5.08	□□□□□ -1.6
SNF11	YDR073W	KRE6	P32486	720 aa		5.08	□□□□□ -1.6
SNF11	YDR073W	GCG1	P32656	232 aa	Known RBP	5.08	□□□□□ -1.6
SNF11	YDR073W	COS9	P36034	407 aa		5.08	□□□□□ -1.6
SNF11	YDR073W	SBE22	P38814	852 aa		5.08	□□□□□ -1.6
SNF11	YDR073W	SEH1	P53011	349 aa	Known RBP	5.08	□□□□□ -1.6
SNF11	YDR073W	BIO4	P53630	237 aa		5.08	□□□□□ -1.6
SNF11	YDR073W	BCH1	Q05029	724 aa		5.08	□□□□□ -1.6
SNF11	YDR073W	BER1	Q06688	274 aa	Known RBP	5.08	□□□□□ -1.6
SNF11	YDR073W	PBP4	Q07362	185 aa	Known RBP	5.08	□□□□□ -1.6
SNF11	YDR073W	TSR1	Q07381	788 aa	Known RBP	5.08	□□□□□ -1.6
SNF11	YDR073W	RAX1	Q08760	435 aa		5.08	□□□□□ -1.6
SNF11	YDR073W	ITR2	P30606	609 aa		5.07	□□□□□ -1.6
SNF11	YDR073W	SRB4	P32569	687 aa		5.07	□□□□□ -1.6
SNF11	YDR073W	CYM1	P32898	989 aa		5.07	□□□□□ -1.6
SNF11	YDR073W	PTR2	P32901	601 aa		5.07	□□□□□ -1.6
SNF11	YDR073W	TIR2	P33890	251 aa		5.07	□□□□□ -1.6
SNF11	YDR073W	SWD2	P36104	329 aa	Predicted RBP	5.07	□□□□□ -1.6
SNF11	YDR073W	GPX2	P38143	162 aa		5.07	□□□□□ -1.6
SNF11	YDR073W	YHK8	P38776	514 aa		5.07	□□□□□ -1.6
SNF11	YDR073W	HAT2	P39984	401 aa		5.07	□□□□□ -1.6
SNF11	YDR073W	PIR3	Q03180	325 aa		5.07	□□□□□ -1.6
SNF11	YDR073W	YMR254C	Q04838	102 aa		5.07	□□□□□ -1.6
SNF11	YDR073W	RTT103	Q05543	409 aa		5.07	□□□□□ -1.6
SNF11	YDR073W	DET1	Q99288	334 aa	Known RBP	5.07	□□□□□ -1.6
SNF11	YDR073W	BNR1	P40450	1375 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	COX2	P00410	251 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	PGK1	P00560	416 aa	Known RBP	5.06	□□□□□ -1.6
SNF11	YDR073W	ARG80	P07249	177 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	VPS1	P21576	704 aa	Known RBP	5.06	□□□□□ -1.6
SNF11	YDR073W	PUT3	P25502	979 aa	Predicted RBP	5.06	□□□□□ -1.6
SNF11	YDR073W	DCC1	P25559	380 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	ERG9	P29704	444 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	MKK1	P32490	508 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	TDA11	P38854	504 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	PRM9	P39551	298 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	ALG8	P40351	577 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	YIR014W	P40570	242 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	RRT5	P43607	289 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	YJR030C	P47101	745 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	ABM1	P47146	123 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	OKP1	P53298	406 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	MKC7	P53379	596 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	HXT11	P54862	567 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	YPL080C	Q02826	108 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	YMR181C	Q03231	154 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	CSM3	Q04659	317 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	GTO3	Q04806	366 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	CMS1	Q07897	291 aa	Known RBP	5.06	□□□□□ -1.6
SNF11	YDR073W	GAT3	Q07928	141 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	GIS3	Q12418	502 aa		5.06	□□□□□ -1.6
SNF11	YDR073W	GLN3	P18494	730 aa		5.05	□□□□□ -1.6
SNF11	YDR073W	AIM17	P23180	465 aa	Known RBP	5.05	□□□□□ -1.6
SNF11	YDR073W	TRS65	P32893	560 aa		5.05	□□□□□ -1.6
SNF11	YDR073W	RIB5	P38145	238 aa		5.05	□□□□□ -1.6
SNF11	YDR073W	SIP3	P38717	1229 aa		5.05	□□□□□ -1.6
SNF11	YDR073W	YPT35	P38815	214 aa	Known RBP	5.05	□□□□□ -1.6
SNF11	YDR073W	YIR016W	P40572	265 aa		5.05	□□□□□ -1.6
SNF11	YDR073W	AGP3	P43548	558 aa		5.05	□□□□□ -1.6
SNF11	YDR073W	OTU1	P43558	301 aa		5.05	□□□□□ -1.6
SNF11	YDR073W	YAR1	P46683	200 aa		5.05	□□□□□ -1.6
SNF11	YDR073W	IKS1	P47042	667 aa		5.05	□□□□□ -1.6
SNF11	YDR073W	CAF40	P53829	373 aa		5.05	□□□□□ -1.6
SNF11	YDR073W	RPL15B	P54780	204 aa	Predicted RBP	5.05	□□□□□ -1.6
SNF11	YDR073W	NDE2	Q07500	545 aa		5.05	□□□□□ -1.6
SNF11	YDR073W	SNX3	Q08826	162 aa	Known RBP	5.05	□□□□□ -1.6
SNF11	YDR073W	MDM10	P18409	493 aa		5.04	□□□□□ -1.6
SNF11	YDR073W	YCR022C	P25620	114 aa		5.04	□□□□□ -1.6
SNF11	YDR073W	ZRT1	P32804	376 aa		5.04	□□□□□ -1.6
SNF11	YDR073W	TRF5	P48561	642 aa	Known RBP	5.04	□□□□□ -1.6
SNF11	YDR073W	MRPL50	P53724	139 aa		5.04	□□□□□ -1.6
SNF11	YDR073W	SED5	Q01590	340 aa		5.04	□□□□□ -1.6
SNF11	YDR073W	IRC4	Q03036	179 aa		5.04	□□□□□ -1.6
SNF11	YDR073W	YMR209C	Q03648	457 aa		5.04	□□□□□ -1.6
SNF11	YDR073W	ADH6	Q04894	360 aa	Known RBP	5.04	□□□□□ -1.6
SNF11	YDR073W	SSQ1	Q05931	657 aa	Predicted RBP	5.04	□□□□□ -1.6
SNF11	YDR073W	APC9	Q12107	265 aa		5.04	□□□□□ -1.6
SNF11	YDR073W	YLR108C	Q12259	485 aa		5.04	□□□□□ -1.6
SNF11	YDR073W	ATG31	Q12421	196 aa		5.04	□□□□□ -1.6
SNF11	YDR073W	MEX67	Q99257	599 aa	Known RBP	5.04	□□□□□ -1.6
SNF11	YDR073W	ADH2	P00331	348 aa	Known RBP	5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 103.8 ms