RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C MRM2P53123 320 aa3.02□□□□□ -1.93
RRP42YDL111C YGR168CP53293 376 aa3.02□□□□□ -1.93
RRP42YDL111C WSC2P53832 503 aa3.02□□□□□ -1.93
RRP42YDL111C YNL260CP53846 198 aa3.02□□□□□ -1.93
RRP42YDL111C RRN5Q02983 363 aa3.02□□□□□ -1.93
RRP42YDL111C YMR102CQ03177 834 aa3.02□□□□□ -1.93
RRP42YDL111C BCP1Q06338 283 aa3.02□□□□□ -1.93
RRP42YDL111C YDL114WQ07530 308 aa3.02□□□□□ -1.93
RRP42YDL111C GAT3Q07928 141 aa3.02□□□□□ -1.93
RRP42YDL111C DNL4Q08387 944 aaPredicted RBP3.02□□□□□ -1.93
RRP42YDL111C ALE1Q08548 619 aa3.02□□□□□ -1.93
RRP42YDL111C EAF3Q12432 401 aa3.02□□□□□ -1.93
RRP42YDL111C PCL9Q12477 304 aa3.02□□□□□ -1.93
RRP42YDL111C HTZ1Q12692 134 aaKnown RBP3.02□□□□□ -1.93
RRP42YDL111C YCR024C-BQ3E7Z8 88 aa3.02□□□□□ -1.93
RRP42YDL111C RAD1P06777 1100 aa3.01□□□□□ -1.93
RRP42YDL111C MEK1P24719 497 aaPredicted RBP3.01□□□□□ -1.93
RRP42YDL111C RBK1P25332 333 aa3.01□□□□□ -1.93
RRP42YDL111C CPR4P25334 318 aa3.01□□□□□ -1.93
RRP42YDL111C RPL5P26321 297 aaKnown RBP3.01□□□□□ -1.93
RRP42YDL111C DPH5P32469 300 aaPredicted RBP3.01□□□□□ -1.93
RRP42YDL111C YUH1P35127 236 aa3.01□□□□□ -1.93
RRP42YDL111C YMR262WP38430 313 aa3.01□□□□□ -1.93
RRP42YDL111C ATG7P38862 630 aa3.01□□□□□ -1.93
RRP42YDL111C FET3P38993 636 aa3.01□□□□□ -1.93
RRP42YDL111C PRM5P40476 318 aa3.01□□□□□ -1.93
RRP42YDL111C WWM1P43582 211 aaKnown RBP3.01□□□□□ -1.93
RRP42YDL111C EMC2P47133 292 aaKnown RBP3.01□□□□□ -1.93
RRP42YDL111C MND1P53102 219 aa3.01□□□□□ -1.93
RRP42YDL111C MTQ1P53944 314 aa3.01□□□□□ -1.93
RRP42YDL111C SLF1Q12034 447 aaKnown RBP3.01□□□□□ -1.93
RRP42YDL111C YPR1Q12458 312 aa3.01□□□□□ -1.93
RRP42YDL111C DET1Q99288 334 aaKnown RBP3.01□□□□□ -1.93
RRP42YDL111C TRP1P00912 224 aa3□□□□□ -1.93
RRP42YDL111C CYC3P06182 269 aa3□□□□□ -1.93
RRP42YDL111C AGA1P32323 725 aa3□□□□□ -1.93
RRP42YDL111C HXT1P32465 570 aa3□□□□□ -1.93
RRP42YDL111C MKK1P32490 508 aa3□□□□□ -1.93
RRP42YDL111C RAD23P32628 398 aaKnown RBP3□□□□□ -1.93
RRP42YDL111C IML3P38265 245 aa3□□□□□ -1.93
RRP42YDL111C MMS21P38632 267 aa3□□□□□ -1.93
RRP42YDL111C YPT35P38815 214 aaKnown RBP3□□□□□ -1.93
RRP42YDL111C COX16P47081 118 aa3□□□□□ -1.93
RRP42YDL111C AIM24P47127 394 aa3□□□□□ -1.93
RRP42YDL111C SHE10P53075 577 aa3□□□□□ -1.93
RRP42YDL111C YGL185CP53100 379 aa3□□□□□ -1.93
RRP42YDL111C MTM1P53320 366 aa3□□□□□ -1.93
RRP42YDL111C PXR1P53335 271 aaPredicted RBP3□□□□□ -1.93
RRP42YDL111C NUP116Q02630 1113 aa3□□□□□ -1.93
RRP42YDL111C CSM3Q04659 317 aa3□□□□□ -1.93
RRP42YDL111C YGK3Q12222 375 aaPredicted RBP3□□□□□ -1.93
RRP42YDL111C YRM1Q12340 786 aa3□□□□□ -1.93
RRP42YDL111C YBR298C-AQ8TGK4 73 aa3□□□□□ -1.93
RRP42YDL111C YCL021W-AQ96VH3 125 aa3□□□□□ -1.93
RRP42YDL111C RPB5P20434 215 aa2.99□□□□□ -1.93
RRP42YDL111C ITR2P30606 609 aa2.99□□□□□ -1.93
RRP42YDL111C FUN26P31381 517 aa2.99□□□□□ -1.93
RRP42YDL111C ECT1P33412 323 aa2.99□□□□□ -1.93
RRP42YDL111C SPO23P33757 523 aa2.99□□□□□ -1.93
RRP42YDL111C MRPL37P36532 105 aa2.99□□□□□ -1.93
RRP42YDL111C LCB3P47013 409 aa2.99□□□□□ -1.93
RRP42YDL111C YJR030CP47101 745 aa2.99□□□□□ -1.93
RRP42YDL111C YGL260WP53056 76 aa2.99□□□□□ -1.93
RRP42YDL111C CWC22P53333 577 aaKnown RBP2.99□□□□□ -1.93
RRP42YDL111C MKC7P53379 596 aa2.99□□□□□ -1.93
RRP42YDL111C MPP6P53725 186 aaPredicted RBP2.99□□□□□ -1.93
RRP42YDL111C CWC25P53854 179 aaKnown RBP2.99□□□□□ -1.93
RRP42YDL111C TDA1Q03533 586 aa2.99□□□□□ -1.93
RRP42YDL111C YMR010WQ03687 405 aa2.99□□□□□ -1.93
RRP42YDL111C YMR317WQ04893 1140 aa2.99□□□□□ -1.93
RRP42YDL111C SCW10Q04951 389 aa2.99□□□□□ -1.93
RRP42YDL111C SIA1Q12212 622 aa2.99□□□□□ -1.93
RRP42YDL111C UBA3Q99344 299 aa2.99□□□□□ -1.93
RRP42YDL111C RPL24AP04449 155 aaKnown RBP2.98□□□□□ -1.93
RRP42YDL111C RPL16AP26784 199 aaKnown RBP2.98□□□□□ -1.93
RRP42YDL111C POP5P28005 173 aa2.98□□□□□ -1.93
RRP42YDL111C YKL162CP36052 402 aa2.98□□□□□ -1.93
RRP42YDL111C AVT5P38176 459 aa2.98□□□□□ -1.93
RRP42YDL111C YIL067CP40514 678 aa2.98□□□□□ -1.93
RRP42YDL111C HAC1P41546 238 aa2.98□□□□□ -1.93
RRP42YDL111C YCH1P42937 148 aa2.98□□□□□ -1.93
RRP42YDL111C NUP84P52891 726 aa2.98□□□□□ -1.93
RRP42YDL111C MST27P53176 234 aa2.98□□□□□ -1.93
RRP42YDL111C OKP1P53298 406 aa2.98□□□□□ -1.93
RRP42YDL111C YNL050CP53952 270 aa2.98□□□□□ -1.93
RRP42YDL111C ATC1Q04005 294 aa2.98□□□□□ -1.93
RRP42YDL111C CSI1Q04368 295 aa2.98□□□□□ -1.93
RRP42YDL111C YMR027WQ04371 470 aa2.98□□□□□ -1.93
RRP42YDL111C RTN1Q04947 295 aaKnown RBP2.98□□□□□ -1.93
RRP42YDL111C YPR091CQ06833 770 aa2.98□□□□□ -1.93
RRP42YDL111C TSR1Q07381 788 aaKnown RBP2.98□□□□□ -1.93
RRP42YDL111C RRT8Q08219 342 aa2.98□□□□□ -1.93
RRP42YDL111C SAM4Q08985 325 aaKnown RBP2.98□□□□□ -1.93
RRP42YDL111C FCY22Q12119 530 aa2.98□□□□□ -1.93
RRP42YDL111C ERV2Q12284 196 aa2.98□□□□□ -1.93
RRP42YDL111C FMP16Q12497 93 aa2.98□□□□□ -1.93
RRP42YDL111C YER078W-AQ3E7A2 54 aa2.98□□□□□ -1.93
RRP42YDL111C HHF1P02309 103 aaKnown RBP2.97□□□□□ -1.93
RRP42YDL111C MSI1P13712 422 aa2.97□□□□□ -1.93
RRP42YDL111C ICL1P28240 557 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms