RNA–Protein interactions for RNA: YCR004C

YCP4, Transcript of Protein of unknown function, yeast

Gene YCP4, Length 744 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCP4	YCR004C	NOT5	Q12514	560 aa	Predicted RBP	7.38	□□□□□ -1.23
YCP4	YCR004C	PUT2	P07275	575 aa		7.37	□□□□□ -1.23
YCP4	YCR004C	RAP1	P11938	827 aa		7.37	□□□□□ -1.23
YCP4	YCR004C	MER1	P16523	270 aa		7.37	□□□□□ -1.23
YCP4	YCR004C	CLB3	P24870	427 aa		7.37	□□□□□ -1.23
YCP4	YCR004C	YCR051W	P25631	222 aa		7.37	□□□□□ -1.23
YCP4	YCR004C	YIL012W	P40551	113 aa		7.37	□□□□□ -1.23
YCP4	YCR004C	LGE1	Q02796	332 aa	Known RBP	7.37	□□□□□ -1.23
YCP4	YCR004C	API2	Q04413	109 aa		7.37	□□□□□ -1.23
YCP4	YCR004C	DCI1	Q08558	271 aa		7.37	□□□□□ -1.23
YCP4	YCR004C	YIG1	Q08956	461 aa		7.37	□□□□□ -1.23
YCP4	YCR004C	MCP1	Q12106	302 aa		7.37	□□□□□ -1.23
YCP4	YCR004C	RHO1	P06780	209 aa	Known RBP	7.36	□□□□□ -1.23
YCP4	YCR004C	DBP3	P20447	523 aa	Known RBP	7.36	□□□□□ -1.23
YCP4	YCR004C	PHO91	P27514	894 aa		7.36	□□□□□ -1.23
YCP4	YCR004C	YBR220C	P38318	560 aa		7.36	□□□□□ -1.23
YCP4	YCR004C	TSC10	P38342	320 aa		7.36	□□□□□ -1.23
YCP4	YCR004C	BIG1	P38813	335 aa		7.36	□□□□□ -1.23
YCP4	YCR004C	MTC6	P38849	526 aa		7.36	□□□□□ -1.23
YCP4	YCR004C	COG3	P40094	801 aa		7.36	□□□□□ -1.23
YCP4	YCR004C	ELA1	P53861	379 aa	Predicted RBP	7.36	□□□□□ -1.23
YCP4	YCR004C	YML119W	Q03208	357 aa		7.36	□□□□□ -1.23
YCP4	YCR004C	YDL109C	Q12103	647 aa		7.36	□□□□□ -1.23
YCP4	YCR004C	YAL064W-B	O13512	126 aa		7.35	□□□□□ -1.23
YCP4	YCR004C	PHO81	P17442	1178 aa		7.35	□□□□□ -1.23
YCP4	YCR004C	CCA1	P21269	546 aa		7.35	□□□□□ -1.23
YCP4	YCR004C	ITR1	P30605	584 aa		7.35	□□□□□ -1.23
YCP4	YCR004C	CHK1	P38147	527 aa		7.35	□□□□□ -1.23
YCP4	YCR004C	RFC4	P40339	323 aa	Known RBP	7.35	□□□□□ -1.23
YCP4	YCR004C	YIL165C	P40446	119 aa		7.35	□□□□□ -1.23
YCP4	YCR004C	DAM1	P53267	343 aa		7.35	□□□□□ -1.23
YCP4	YCR004C	HAS1	Q03532	505 aa	Known RBP	7.35	□□□□□ -1.23
YCP4	YCR004C	KRE28	Q04431	385 aa		7.35	□□□□□ -1.23
YCP4	YCR004C	ARV1	Q06541	321 aa		7.35	□□□□□ -1.23
YCP4	YCR004C	YLR040C	Q07988	224 aa		7.35	□□□□□ -1.23
YCP4	YCR004C	MHF1	Q3E835	90 aa		7.35	□□□□□ -1.23
YCP4	YCR004C	RPL35A	P0CX84	120 aa	Known RBP	7.34	□□□□□ -1.23
YCP4	YCR004C	RPL35B	P0CX85	120 aa	Known RBP	7.34	□□□□□ -1.23
YCP4	YCR004C	SCO1	P23833	295 aa		7.34	□□□□□ -1.23
YCP4	YCR004C	DEP1	P31385	405 aa		7.34	□□□□□ -1.23
YCP4	YCR004C	LHP1	P33399	275 aa	Known RBP	7.34	□□□□□ -1.23
YCP4	YCR004C	SPC29	P33419	253 aa		7.34	□□□□□ -1.23
YCP4	YCR004C	HIS7	P33734	552 aa	Known RBP	7.34	□□□□□ -1.23
YCP4	YCR004C	RCK1	P38622	512 aa		7.34	□□□□□ -1.23
YCP4	YCR004C	YHL044W	P38727	235 aa		7.34	□□□□□ -1.23
YCP4	YCR004C	AIR1	P40507	360 aa	Known RBP	7.34	□□□□□ -1.23
YCP4	YCR004C	CCT7	P42943	550 aa	Known RBP	7.34	□□□□□ -1.23
YCP4	YCR004C	ADO1	P47143	340 aa	Known RBP	7.34	□□□□□ -1.23
YCP4	YCR004C	ACS2	P52910	683 aa	Known RBP	7.34	□□□□□ -1.23
YCP4	YCR004C	TWF1	P53250	332 aa		7.34	□□□□□ -1.23
YCP4	YCR004C	PCP1	P53259	346 aa		7.34	□□□□□ -1.23
YCP4	YCR004C	MRPL19	P53875	158 aa		7.34	□□□□□ -1.23
YCP4	YCR004C	RNT1	Q02555	471 aa		7.34	□□□□□ -1.23
YCP4	YCR004C	NAN1	Q02931	896 aa	Known RBP	7.34	□□□□□ -1.23
YCP4	YCR004C	KAP120	Q02932	1032 aa		7.34	□□□□□ -1.23
YCP4	YCR004C	RSC9	Q03124	581 aa		7.34	□□□□□ -1.23
YCP4	YCR004C	CTL1	Q03220	320 aa	Known RBP	7.34	□□□□□ -1.23
YCP4	YCR004C	BRX1	Q08235	291 aa	Known RBP	7.34	□□□□□ -1.23
YCP4	YCR004C	ARG3	P05150	338 aa		7.33	□□□□□ -1.24
YCP4	YCR004C	ERD2	P18414	219 aa		7.33	□□□□□ -1.24
YCP4	YCR004C	RPS1B	P23248	255 aa	Known RBP	7.33	□□□□□ -1.24
YCP4	YCR004C	CLB2	P24869	491 aa		7.33	□□□□□ -1.24
YCP4	YCR004C	RAD14	P28519	371 aa		7.33	□□□□□ -1.24
YCP4	YCR004C	MRE11	P32829	692 aa		7.33	□□□□□ -1.24
YCP4	YCR004C	MAE1	P36013	669 aa	Known RBP	7.33	□□□□□ -1.24
YCP4	YCR004C	MNN9	P39107	395 aa	Known RBP	7.33	□□□□□ -1.24
YCP4	YCR004C	PRE6	P40303	254 aa	Known RBP	7.33	□□□□□ -1.24
YCP4	YCR004C	MOB2	P43563	287 aa		7.33	□□□□□ -1.24
YCP4	YCR004C	YGR126W	P53274	230 aa		7.33	□□□□□ -1.24
YCP4	YCR004C	ARC35	P53731	342 aa	Known RBP	7.33	□□□□□ -1.24
YCP4	YCR004C	VBA4	Q04602	768 aa	Known RBP	7.33	□□□□□ -1.24
YCP4	YCR004C	IRC19	Q07843	230 aa		7.33	□□□□□ -1.24
YCP4	YCR004C	AVO1	Q08236	1176 aa		7.33	□□□□□ -1.24
YCP4	YCR004C	GRE1	Q08969	168 aa		7.33	□□□□□ -1.24
YCP4	YCR004C	SET6	Q12529	373 aa		7.33	□□□□□ -1.24
YCP4	YCR004C	MOD5	P07884	428 aa		7.32	□□□□□ -1.24
YCP4	YCR004C	TSL1	P38427	1098 aa	Known RBP	7.32	□□□□□ -1.24
YCP4	YCR004C	TOS2	P50078	622 aa		7.32	□□□□□ -1.24
YCP4	YCR004C	MTQ1	P53944	314 aa		7.32	□□□□□ -1.24
YCP4	YCR004C	MMT1	Q03218	510 aa		7.32	□□□□□ -1.24
YCP4	YCR004C	NOP12	Q08208	459 aa	Known RBP	7.32	□□□□□ -1.24
YCP4	YCR004C	MED2	Q12124	431 aa		7.32	□□□□□ -1.24
YCP4	YCR004C	CCW14	O13547	238 aa		7.31	□□□□□ -1.24
YCP4	YCR004C	MF(ALPHA)1	P01149	165 aa		7.31	□□□□□ -1.24
YCP4	YCR004C	PUP2	P32379	260 aa		7.31	□□□□□ -1.24
YCP4	YCR004C	SOF1	P33750	489 aa	Known RBP	7.31	□□□□□ -1.24
YCP4	YCR004C	COS9	P36034	407 aa		7.31	□□□□□ -1.24
YCP4	YCR004C	MET28	P40573	187 aa		7.31	□□□□□ -1.24
YCP4	YCR004C	HXT9	P40885	567 aa		7.31	□□□□□ -1.24
YCP4	YCR004C	SLS1	P42900	643 aa		7.31	□□□□□ -1.24
YCP4	YCR004C	MNT4	P53745	580 aa		7.31	□□□□□ -1.24
YCP4	YCR004C	ASI1	P54074	624 aa		7.31	□□□□□ -1.24
YCP4	YCR004C	HXT11	P54862	567 aa		7.31	□□□□□ -1.24
YCP4	YCR004C	MRP51	Q02950	344 aa		7.31	□□□□□ -1.24
YCP4	YCR004C	RNH1	Q04740	348 aa		7.31	□□□□□ -1.24
YCP4	YCR004C	RSC58	Q07979	502 aa		7.31	□□□□□ -1.24
YCP4	YCR004C	ATP2	P00830	511 aa	Known RBP	7.3	□□□□□ -1.24
YCP4	YCR004C	CDC4	P07834	779 aa		7.3	□□□□□ -1.24
YCP4	YCR004C	SLC1	P33333	303 aa		7.3	□□□□□ -1.24
YCP4	YCR004C	BUD9	P53226	547 aa		7.3	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 78.5 ms