RNA–Protein interactions for RNA: YCL016C

DCC1, Transcript of Subunit of a complex with Ctf8p and Ctf18p, yeast

Gene DCC1, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DCC1	YCL016C	RPN2	P32565	945 aa	Known RBP	4.84	□□□□□ -1.63
DCC1	YCL016C	YKR015C	P36111	568 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	SIC1	P38634	284 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	SSZ1	P38788	538 aa	Known RBP	4.84	□□□□□ -1.63
DCC1	YCL016C	BIG1	P38813	335 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	APE4	P38821	490 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	RIX1	P38883	763 aa	Predicted RBP	4.84	□□□□□ -1.63
DCC1	YCL016C	RCY1	P39531	840 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	SOP4	P39543	234 aa	Predicted RBP	4.84	□□□□□ -1.63
DCC1	YCL016C	AVT6	P40074	448 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	LTP1	P40347	161 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	SPT20	P50875	604 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	SLD3	P53135	668 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	PBP1	P53297	722 aa	Known RBP	4.84	□□□□□ -1.63
DCC1	YCL016C	SED5	Q01590	340 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	REC102	Q02721	264 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	TLG1	Q03322	224 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	BNA5	Q05979	453 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
DCC1	YCL016C	YTM1	Q12024	460 aa	Predicted RBP	4.84	□□□□□ -1.63
DCC1	YCL016C	NFI1	Q12216	726 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	YLR126C	Q12288	251 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	RKM5	Q12367	367 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	MED11	Q99278	115 aa		4.84	□□□□□ -1.63
DCC1	YCL016C	THR1	P17423	357 aa	Known RBP	4.83	□□□□□ -1.64
DCC1	YCL016C	RRP7	P25368	297 aa	Predicted RBP	4.83	□□□□□ -1.64
DCC1	YCL016C	VMA6	P32366	345 aa	Known RBP	4.83	□□□□□ -1.64
DCC1	YCL016C	HOG1	P32485	435 aa		4.83	□□□□□ -1.64
DCC1	YCL016C	TEF4	P36008	412 aa	Known RBP	4.83	□□□□□ -1.64
DCC1	YCL016C	YLF2	P38746	405 aa		4.83	□□□□□ -1.64
DCC1	YCL016C	PRP39	P39682	629 aa	Known RBP	4.83	□□□□□ -1.64
DCC1	YCL016C	SNM1	P40993	198 aa		4.83	□□□□□ -1.64
DCC1	YCL016C	FET5	P43561	622 aa		4.83	□□□□□ -1.64
DCC1	YCL016C	IBA57	P47158	497 aa		4.83	□□□□□ -1.64
DCC1	YCL016C	TWF1	P53250	332 aa		4.83	□□□□□ -1.64
DCC1	YCL016C	SNF12	P53628	566 aa		4.83	□□□□□ -1.64
DCC1	YCL016C	TPS1	Q00764	495 aa	Known RBP	4.83	□□□□□ -1.64
DCC1	YCL016C	KRE28	Q04431	385 aa		4.83	□□□□□ -1.64
DCC1	YCL016C	YLR030W	Q07967	263 aa		4.83	□□□□□ -1.64
DCC1	YCL016C	FDH1	Q08911	376 aa		4.83	□□□□□ -1.64
DCC1	YCL016C	YOR019W	Q99248	730 aa		4.83	□□□□□ -1.64
DCC1	YCL016C	VCX1	Q99385	411 aa		4.83	□□□□□ -1.64
DCC1	YCL016C	SIR3	P06701	978 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	RPC40	P07703	335 aa	Known RBP	4.82	□□□□□ -1.64
DCC1	YCL016C	RPL1A	P0CX43	217 aa	Known RBP	4.82	□□□□□ -1.64
DCC1	YCL016C	RPL1B	P0CX44	217 aa	Known RBP	4.82	□□□□□ -1.64
DCC1	YCL016C	AAC3	P18238	307 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	CHA1	P25379	360 aa	Known RBP	4.82	□□□□□ -1.64
DCC1	YCL016C	RPS5	P26783	225 aa	Known RBP	4.82	□□□□□ -1.64
DCC1	YCL016C	CWP1	P28319	239 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	MSN2	P33748	704 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	AUR1	P36107	401 aa	Predicted RBP	4.82	□□□□□ -1.64
DCC1	YCL016C	UTH1	P36135	365 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	YRO2	P38079	344 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	ISC1	P40015	477 aa	Known RBP	4.82	□□□□□ -1.64
DCC1	YCL016C	KRE29	P40026	464 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	IES5	P40060	125 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	MET28	P40573	187 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	ALR2	P43553	858 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	YJR120W	P47157	116 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	PMT3	P47190	753 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	RPS12	P48589	143 aa	Known RBP	4.82	□□□□□ -1.64
DCC1	YCL016C	HSV2	P50079	448 aa	Predicted RBP	4.82	□□□□□ -1.64
DCC1	YCL016C	MTQ1	P53944	314 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	MFB1	Q04922	465 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	RNH202	Q05635	350 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	RXT3	Q07458	294 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	YEH1	Q07804	573 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	YOR378W	Q08902	515 aa		4.82	□□□□□ -1.64
DCC1	YCL016C	RTK1	Q12100	620 aa	Predicted RBP	4.82	□□□□□ -1.64
DCC1	YCL016C	PST2	Q12335	198 aa	Known RBP	4.82	□□□□□ -1.64
DCC1	YCL016C	TMA7	Q3E764	64 aa	Known RBP	4.82	□□□□□ -1.64
DCC1	YCL016C	CBS1	P14066	229 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	TFS1	P14306	219 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	HOP1	P20050	605 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	RPA135	P22138	1203 aa	Known RBP	4.81	□□□□□ -1.64
DCC1	YCL016C	CDC12	P32468	407 aa	Known RBP	4.81	□□□□□ -1.64
DCC1	YCL016C	PTR2	P32901	601 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	IPT1	P38954	527 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	AST2	P39945	430 aa	Known RBP	4.81	□□□□□ -1.64
DCC1	YCL016C	RRG9	P40156	214 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	GID8	P40208	455 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	SOK1	P40317	901 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	AAD10	P47182	288 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	NUP57	P48837	541 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	IMD4	P50094	524 aa	Known RBP	4.81	□□□□□ -1.64
DCC1	YCL016C	YGR012W	P53206	393 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	SYF2	P53277	215 aa	Predicted RBP	4.81	□□□□□ -1.64
DCC1	YCL016C	YGR168C	P53293	376 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	ERG13	P54839	491 aa	Known RBP	4.81	□□□□□ -1.64
DCC1	YCL016C	YMD8	Q03697	442 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	NAT4	Q04751	285 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	FMP42	Q04991	504 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	YLR345W	Q06137	509 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	VPS36	Q06696	566 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	TRM10	Q12400	293 aa		4.81	□□□□□ -1.64
DCC1	YCL016C	MET17	P06106	444 aa		4.8	□□□□□ -1.64
DCC1	YCL016C	YOL163W	P0CF20	169 aa		4.8	□□□□□ -1.64
DCC1	YCL016C	DPB2	P24482	689 aa	Predicted RBP	4.8	□□□□□ -1.64
DCC1	YCL016C	BUD5	P25300	642 aa	Predicted RBP	4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms