RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROT2	YBR229C	RAS1	P01119	309 aa		4.59	□□□□□ -1.68
ROT2	YBR229C	SEC12	P11655	471 aa		4.59	□□□□□ -1.68
ROT2	YBR229C	HOM2	P13663	365 aa	Known RBP	4.59	□□□□□ -1.68
ROT2	YBR229C	FPR1	P20081	114 aa	Known RBP	4.59	□□□□□ -1.68
ROT2	YBR229C	APN1	P22936	367 aa		4.59	□□□□□ -1.68
ROT2	YBR229C	ADE1	P27616	306 aa		4.59	□□□□□ -1.68
ROT2	YBR229C	TAT1	P38085	619 aa		4.59	□□□□□ -1.68
ROT2	YBR229C	MCM7	P38132	845 aa		4.59	□□□□□ -1.68
ROT2	YBR229C	MET30	P39014	640 aa		4.59	□□□□□ -1.68
ROT2	YBR229C	YEL068C	P39977	110 aa		4.59	□□□□□ -1.68
ROT2	YBR229C	PHM8	P40025	321 aa		4.59	□□□□□ -1.68
ROT2	YBR229C	RRP40	Q08285	240 aa	Known RBP	4.59	□□□□□ -1.68
ROT2	YBR229C	PUS9	Q12069	462 aa		4.59	□□□□□ -1.68
ROT2	YBR229C	YOR214C	Q12282	236 aa		4.59	□□□□□ -1.68
ROT2	YBR229C	LSO1	Q3E827	93 aa		4.59	□□□□□ -1.68
ROT2	YBR229C	MTR10	Q99189	972 aa		4.59	□□□□□ -1.68
ROT2	YBR229C	HRP1	Q99383	534 aa	Known RBP	4.59	□□□□□ -1.68
ROT2	YBR229C	MDM35	O60200	86 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	DPM1	P14020	267 aa	Known RBP	4.58	□□□□□ -1.68
ROT2	YBR229C	YCR102C	P25608	368 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	MRPL3	P36516	390 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	NAT2	P37293	288 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	HPA3	P39979	161 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	CIN1	P40987	1014 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	RPE1	P46969	238 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	PDH1	Q12428	516 aa	Known RBP	4.58	□□□□□ -1.68
ROT2	YBR229C	CMP2	P14747	604 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
ROT2	YBR229C	TMA19	P35691	167 aa	Known RBP	4.58	□□□□□ -1.68
ROT2	YBR229C	YKL151C	P36059	337 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	MRPL37	P36532	105 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	RPS20	P38701	121 aa	Known RBP	4.58	□□□□□ -1.68
ROT2	YBR229C	CHL4	P38907	458 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	TIM54	P47045	478 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	HOS2	P53096	452 aa	Predicted RBP	4.58	□□□□□ -1.68
ROT2	YBR229C	DLT1	Q04216	342 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	MLC2	Q06580	163 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	YOR289W	Q12012	251 aa	Predicted RBP	4.58	□□□□□ -1.68
ROT2	YBR229C	TPO4	Q12256	659 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	SKS1	Q12505	502 aa		4.58	□□□□□ -1.68
ROT2	YBR229C	MOD5	P07884	428 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	YOL162W	P0CF19	215 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	STE12	P13574	688 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	HOP1	P20050	605 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	PHO80	P20052	293 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	RPA135	P22138	1203 aa	Known RBP	4.57	□□□□□ -1.68
ROT2	YBR229C	EXG1	P23776	448 aa	Known RBP	4.57	□□□□□ -1.68
ROT2	YBR229C	RNP1	P32385	249 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	KRE6	P32486	720 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	RPC34	P32910	317 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	ANR2	P36090	516 aa	Predicted RBP	4.57	□□□□□ -1.68
ROT2	YBR229C	TCD2	P36101	447 aa	Known RBP	4.57	□□□□□ -1.68
ROT2	YBR229C	APT2	P36973	181 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	IFA38	P38286	347 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	YHR097C	P38809	366 aa	Known RBP	4.57	□□□□□ -1.68
ROT2	YBR229C	RGA1	P39083	1007 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	OSW5	P40219	148 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	MOB1	P40484	314 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	SPT20	P50875	604 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	MAL11	P53048	616 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	PAU12	P53343	120 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	YMR130W	Q04223	302 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	YOL036W	Q08206	761 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	SKI7	Q08491	747 aa	Predicted RBP	4.57	□□□□□ -1.68
ROT2	YBR229C	URA3	P03962	267 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	RAD52	P06778	471 aa	Known RBP	4.57	□□□□□ -1.68
ROT2	YBR229C	PEP4	P07267	405 aa	Known RBP	4.57	□□□□□ -1.68
ROT2	YBR229C	SLY41	P22215	453 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
ROT2	YBR229C	TAE1	P38340	232 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	RRP4	P38792	359 aa	Known RBP	4.57	□□□□□ -1.68
ROT2	YBR229C	GID8	P40208	455 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	HXT9	P40885	567 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	APS3	P47064	194 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	AAD10	P47182	288 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	YGL101W	P53144	215 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	RSM28	Q03430	361 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	SPC19	Q03954	165 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	ISR1	Q06098	443 aa	Known RBP	4.57	□□□□□ -1.68
ROT2	YBR229C	SPC3	Q12133	184 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	YPR022C	Q12139	1133 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	YOR114W	Q12219	294 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	YKL033W-A	Q86ZR7	236 aa		4.57	□□□□□ -1.68
ROT2	YBR229C	PNO1	Q99216	274 aa	Known RBP	4.57	□□□□□ -1.68
ROT2	YBR229C	CAN1	P04817	590 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	YGL041W-A	P0C5N3	154 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	DBP2	P24783	546 aa	Known RBP	4.56	□□□□□ -1.68
ROT2	YBR229C	ERG1	P32476	496 aa	Known RBP	4.56	□□□□□ -1.68
ROT2	YBR229C	LST4	P34239	828 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	ECM15	P35195	104 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	RTC2	P38279	296 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	MSS4	P38994	779 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
ROT2	YBR229C	PLB1	P39105	664 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	YER137C	P40083	148 aa	Known RBP	4.56	□□□□□ -1.68
ROT2	YBR229C	ERG26	P53199	349 aa	Known RBP	4.56	□□□□□ -1.68
ROT2	YBR229C	SEC13	Q04491	297 aa	Known RBP	4.56	□□□□□ -1.68
ROT2	YBR229C	MFB1	Q04922	465 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	CDA2	Q06703	312 aa		4.56	□□□□□ -1.68
ROT2	YBR229C	ATG41	Q12048	136 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 98.2 ms