RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 MICU3Q86XE3 530 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 CCDC60Q8IWA6 550 aaPredicted RBP11.38□□□□□ -0.59
PHGDH-222ENST00000641587 THNSL1Q8IYQ7 743 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 KIAA0319LQ8IZA0 1049 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 BRF1Q92994 677 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 SNX21Q969T3 373 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 SNX27Q96L92 541 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 OSMRQ99650 979 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 SDF4Q9BRK5 362 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 CWH43Q9H720 699 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 AGO4Q9HCK5 861 aaKnown RBP11.38□□□□□ -0.59
PHGDH-222ENST00000641587 TMEM260Q9NX78 707 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 ST3GAL5Q9UNP4 418 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 PCDHB12Q9Y5F1 795 aa11.38□□□□□ -0.59
PHGDH-222ENST00000641587 NFASCO94856 1347 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 DENND3A2RUS2 1198 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 HIDE1A8MVS5 230 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 ZBTB42B2RXF5 422 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 K7ELQ4 463 aaPredicted RBP11.37□□□□□ -0.59
PHGDH-222ENST00000641587 BACH1O14867 736 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 FSCN2O14926 492 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 MAFGO15525 162 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 ATG7O95352 703 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 HSP90AA1P07900 732 aaKnown RBP11.37□□□□□ -0.59
PHGDH-222ENST00000641587 TECP42680 631 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 KCNC3Q14003 757 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 TOB2Q14106 344 aaPredicted RBP11.37□□□□□ -0.59
PHGDH-222ENST00000641587 KIZQ2M2Z5 673 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 SYCE2Q6PIF2 218 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 ANO3Q9BYT9 981 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 S1PR5Q9H228 398 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 SMOC2Q9H3U7 446 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 RGS18Q9NS28 235 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 RNF19AQ9NV58 838 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 LIMCH1Q9UPQ0 1083 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 MYO10Q9HD67 2058 aa11.37□□□□□ -0.59
PHGDH-222ENST00000641587 IGKV6D-21A0A0A0MT36 114 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 KLF18A0A0U1RQI7 1052 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 ADAMTS3O15072 1205 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 HBP1O60381 514 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 GFRA3O60609 400 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 VTNP04004 478 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 ATF7P17544 494 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-222ENST00000641587 ATP4AP20648 1035 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 AVPR2P30518 371 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 NAPAP54920 295 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 UBE3AQ05086 875 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 PTPN21Q16825 1174 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 CEP55Q53EZ4 464 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 ANKRD54Q6NXT1 300 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 ABHD15Q6UXT9 468 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 LRRC55Q6ZSA7 311 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 SLC24A5Q71RS6 500 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 NME8Q8N427 588 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 FANCBQ8NB91 859 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 ZNF668Q96K58 619 aaPredicted RBP11.36□□□□□ -0.59
PHGDH-222ENST00000641587 TCF25Q9BQ70 676 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 AAASQ9NRG9 546 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 SLC12A7Q9Y666 1083 aa11.36□□□□□ -0.59
PHGDH-222ENST00000641587 MYH9P35579 1960 aaKnown RBP11.36□□□□□ -0.59
PHGDH-222ENST00000641587 GOLGA8BA8MQT2 603 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 H0Y858 1186 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 C22orf31O95567 290 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 CALM1P0DP23 149 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 CALM2P0DP24 149 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 CALM3P0DP25 149 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 LIFRP42702 1097 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 STK3Q13188 491 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 DSC3Q14574 896 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 PDXDC2PQ6P474 469 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 SYNE3Q6ZMZ3 975 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 FEZF2Q8TBJ5 459 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 MRPS27Q92552 414 aaKnown RBP11.35□□□□□ -0.59
PHGDH-222ENST00000641587 TMX3Q96JJ7 454 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 ZSCAN31Q96LW9 406 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-222ENST00000641587 IPO9Q96P70 1041 aaKnown RBP11.35□□□□□ -0.59
PHGDH-222ENST00000641587 CDCA3Q99618 268 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-222ENST00000641587 MTA3Q9BTC8 594 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 ATP6V0A4Q9HBG4 840 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 RIC8AQ9NPQ8 531 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 ENTPD7Q9NQZ7 604 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 C1orf112Q9NSG2 853 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 DCHS1Q96JQ0 3298 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 WDR81Q562E7 1941 aa11.35□□□□□ -0.59
PHGDH-222ENST00000641587 COL1A2P08123 1366 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 FAM86B1E9PN63 330 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 MEIS1O00470 390 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 DHX15O43143 795 aaKnown RBP11.34□□□□□ -0.59
PHGDH-222ENST00000641587 GPR32O75388 356 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 WEE2P0C1S8 567 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 FAM86B2P0C5J1 330 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 LAG3P18627 525 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 SREBF1P36956 1147 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 CLCN3P51790 818 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 ADCY7P51828 1080 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 FUT2Q10981 343 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 PKN1Q16512 942 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 SWSAP1Q6NVH7 229 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 APOA5Q6Q788 366 aa11.34□□□□□ -0.59
PHGDH-222ENST00000641587 TMEM184AQ6ZMB5 413 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms