RNA–Protein interactions for RNA: ENST00000626874.2

CHD2-208, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 7,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-208ENST00000626874 NHEJ1Q9H9Q4 299 aaPredicted RBP7.38□□□□□ -1.23
CHD2-208ENST00000626874 KIAA1468Q9P260 1216 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 SFMBT1Q9UHJ3 866 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 PODXLO00592 558 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 FOXP2O15409 715 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 VCLP18206 1134 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 PSMA2P25787 234 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 GCKP35557 465 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 MORF4L2Q15014 288 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 STILQ15468 1287 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 ZNF699Q32M78 642 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 STAG1Q8WVM7 1258 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 MYOM2P54296 1465 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 TMEM2Q9UHN6 1383 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 EEF1B2P24534 225 aaKnown RBP7.38□□□□□ -1.23
CHD2-208ENST00000626874 ZNF75DP51815 510 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 MTFR1Q15390 333 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 EFHC2Q5JST6 749 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 THEMIS2Q5TEJ8 643 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 RASEFQ8IZ41 740 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 TMEM35BQ8NCS4 154 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 POLE3Q9NRF9 147 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 CLASP1Q7Z460 1538 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 CDC42BPGQ6DT37 1551 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 PGRMC1O00264 195 aaKnown RBP7.38□□□□□ -1.23
CHD2-208ENST00000626874 STAG3L1P0CL83 205 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 EEF1DP29692 281 aaKnown RBP7.38□□□□□ -1.23
CHD2-208ENST00000626874 GYG1P46976 350 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 BASP1P80723 227 aaKnown RBP7.38□□□□□ -1.23
CHD2-208ENST00000626874 MESDQ14696 234 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 MAPRE2Q15555 327 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 FOXP3Q9BZS1 431 aa7.38□□□□□ -1.23
CHD2-208ENST00000626874 ZC3H4Q9UPT8 1303 aaKnown RBP7.38□□□□□ -1.23
CHD2-208ENST00000626874 TNPO2O14787 897 aaKnown RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 LMNAP02545 664 aaKnown RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 CPB1P15086 417 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 AARSP49588 968 aaKnown RBP eCLIP7.37□□□□□ -1.234e-8■□□□□ 11.2
CHD2-208ENST00000626874 ABCE1P61221 599 aaKnown RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 MTMR1Q13613 665 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 FLOT2Q14254 428 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 TKFCQ3LXA3 575 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 ALKBH8Q96BT7 664 aaKnown RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 SUCLG2Q96I99 432 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 FAM49AQ9H0Q0 323 aaPredicted RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 NMRK1Q9NWW6 199 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 HERC5Q9UII4 1024 aaKnown RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 EFCAB6Q5THR3 1501 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 OVOS2A0A0G2JMS6 1433 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 OVOS2A0A0J9YW53 1432 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 OVOS2Q6IE36 1432 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 SYCE1LA8MT33 242 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 PRPF4O43172 522 aaKnown RBP eCLIP7.37□□□□□ -1.23
CHD2-208ENST00000626874 HOXA2O43364 376 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 E2F6O75461 281 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 MYBL1P10243 752 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 EFNA5P52803 228 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 SYTL3Q4VX76 610 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 ZNF438Q7Z4V0 828 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 DDX53Q86TM3 631 aaKnown RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 MRPL48Q96GC5 212 aaKnown RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 TMEM51Q9NW97 253 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 KCNJ14Q9UNX9 436 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 FAM50BQ9Y247 325 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 SHROOM2Q13796 1616 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 CARMIL3Q8ND23 1372 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 USP17L10C9JJH3 530 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 CHUKO15111 745 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 RNASEH1O60930 286 aaKnown RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 PPP6R2O75170 966 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 TCF3P15923 654 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 PAX3P23760 479 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 GPC3P51654 580 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 MTA1Q13330 715 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 ZNF235Q14590 738 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 ARHGAP18Q8N392 663 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.37□□□□□ -1.239e-7■■■■■ 57.1
CHD2-208ENST00000626874 ZNF496Q96IT1 587 aaPredicted RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 TSEN34Q9BSV6 310 aaKnown RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 RAD17O75943 681 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 CCT5P48643 541 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 CDK17Q00537 523 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 ZNF568Q3ZCX4 644 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 WDR75Q8IWA0 830 aaKnown RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 CNOT6LQ96LI5 555 aaKnown RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 UBN2Q6ZU65 1347 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 SYNGAP1Q96PV0 1343 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 PRR29P0C7W0 189 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 HPCAP84074 193 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 CYP4A11Q02928 519 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 SNAPC2Q13487 334 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 ARHGEF7Q14155 803 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 PTPAQ15257 358 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 C20orf194Q5TEA3 1177 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 ARL6IP4Q66PJ3 421 aaKnown RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 TEX9Q8N6V9 391 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 UIMC1Q96RL1 719 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 ORAI2Q96SN7 254 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 ZC4H2Q9NQZ6 224 aa7.37□□□□□ -1.23
CHD2-208ENST00000626874 INTS9Q9NV88 658 aaKnown RBP7.37□□□□□ -1.23
CHD2-208ENST00000626874 VPS9D1Q9Y2B5 631 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms