RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 WDR59Q6PJI9 974 aa20.31■□□□□ 0.84
PCDHB2-202ENST00000622947 FASTKD5Q7L8L6 764 aaKnown RBP20.31■□□□□ 0.84
PCDHB2-202ENST00000622947 FAM178BQ8IXR5 827 aa20.31■□□□□ 0.84
PCDHB2-202ENST00000622947 ATRIPQ8WXE1 791 aa20.31■□□□□ 0.84
PCDHB2-202ENST00000622947 SLC10A4Q96EP9 437 aa20.31■□□□□ 0.84
PCDHB2-202ENST00000622947 CHP1Q99653 195 aa20.31■□□□□ 0.84
PCDHB2-202ENST00000622947 JPH1Q9HDC5 661 aaPredicted RBP20.31■□□□□ 0.84
PCDHB2-202ENST00000622947 TYW1Q9NV66 732 aaKnown RBP20.31■□□□□ 0.84
PCDHB2-202ENST00000622947 MYH9P35579 1960 aaKnown RBP20.31■□□□□ 0.84
PCDHB2-202ENST00000622947 CLIC2O15247 247 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 EIF3JO75822 258 aaKnown RBP20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 PPP1R37O75864 691 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 SLU7O95391 586 aaKnown RBP20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 KCNMA1Q12791 1236 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 CCDC40Q4G0X9 1142 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 DNAJC7Q99615 494 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 GPRC5CQ9NQ84 441 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 GABBR1Q9UBS5 961 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 SEL1LQ9UBV2 794 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 SLC9A2Q9UBY0 812 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 V9GYY5 206 aaPredicted RBP20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 MCM3APO60318 1980 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 ARID2Q68CP9 1835 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 EIF3DO15371 548 aaKnown RBP eCLIP20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 PGK2P07205 417 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 TPM1P09493 284 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 CYP2C8P10632 490 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 CASP4P49662 377 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 ACTR2P61160 394 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 SEPT14Q6ZU15 432 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 CCDC60Q8IWA6 550 aaPredicted RBP20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 RDM1Q8NG50 284 aa20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 SMCR8Q8TEV9 937 aaPredicted RBP20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 NAA15Q9BXJ9 866 aaKnown RBP20.3■□□□□ 0.84
PCDHB2-202ENST00000622947 POTEB2H3BUK9 544 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 CETN3O15182 167 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 AKAP3O75969 853 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 H2AFXP16104 143 aaPredicted RBP20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 TRIM21P19474 475 aaKnown RBP20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 ICAM3P32942 547 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 SNAPC2Q13487 334 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 GNPTABQ3T906 1256 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 FKBP15Q5T1M5 1219 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 SWSAP1Q6NVH7 229 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 ABHD15Q6UXT9 468 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 TXLNBQ8N3L3 684 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 CDHR1Q96JP9 859 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 RASSF4Q9H2L5 321 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 LUC7L2Q9Y383 392 aaKnown RBP20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 KIF2AO00139 706 aaPredicted RBP20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 FANCGO15287 622 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 CCP110O43303 1012 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 NR3C1P04150 777 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 MKRN3Q13064 507 aaKnown RBP20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 TEX35Q5T0J7 233 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 CYFIP1Q7L576 1253 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 MS4A4AQ96JQ5 239 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 TCEAL9Q9UHQ7 104 aa20.29■□□□□ 0.84
PCDHB2-202ENST00000622947 SOCS7O14512 581 aa20.28■□□□□ 0.84
PCDHB2-202ENST00000622947 XKR9Q5GH70 373 aa20.28■□□□□ 0.84
PCDHB2-202ENST00000622947 TRIM65Q6PJ69 517 aa20.28■□□□□ 0.84
PCDHB2-202ENST00000622947 OR8K1Q8NGG5 319 aa20.28■□□□□ 0.84
PCDHB2-202ENST00000622947 RRAGCQ9HB90 399 aa20.28■□□□□ 0.84
PCDHB2-202ENST00000622947 FAM207AQ9NSI2 230 aaPredicted RBP20.28■□□□□ 0.84
PCDHB2-202ENST00000622947 CALUO43852 315 aaPredicted RBP20.27■□□□□ 0.84
PCDHB2-202ENST00000622947 GNA14O95837 355 aa20.27■□□□□ 0.84
PCDHB2-202ENST00000622947 PCMTD1Q96MG8 357 aaPredicted RBP20.27■□□□□ 0.84
PCDHB2-202ENST00000622947 ANKEF1Q9NU02 776 aa20.27■□□□□ 0.84
PCDHB2-202ENST00000622947 GEMIN8Q9NWZ8 242 aaKnown RBP20.27■□□□□ 0.84
PCDHB2-202ENST00000622947 FHOD1Q9Y613 1164 aa20.27■□□□□ 0.84
PCDHB2-202ENST00000622947 ADGRG1Q9Y653 693 aa20.27■□□□□ 0.84
PCDHB2-202ENST00000622947 OSBPP22059 807 aa20.27■□□□□ 0.84
PCDHB2-202ENST00000622947 SOX10P56693 466 aa20.27■□□□□ 0.84
PCDHB2-202ENST00000622947 FIGNQ5HY92 759 aa20.27■□□□□ 0.84
PCDHB2-202ENST00000622947 EEPD1Q7L9B9 569 aa20.27■□□□□ 0.84
PCDHB2-202ENST00000622947 RETREG2Q8NC44 543 aa20.27■□□□□ 0.84
PCDHB2-202ENST00000622947 PORCNQ9H237 461 aa20.27■□□□□ 0.84
PCDHB2-202ENST00000622947 RSPH14Q9UHP6 348 aa20.27■□□□□ 0.84
PCDHB2-202ENST00000622947 DNAJC25-GNG10A0A024R161 153 aa20.26■□□□□ 0.83
PCDHB2-202ENST00000622947 SLC25A27O95847 323 aa20.26■□□□□ 0.83
PCDHB2-202ENST00000622947 ATP4AP20648 1035 aa20.26■□□□□ 0.83
PCDHB2-202ENST00000622947 APBA1Q02410 837 aa20.26■□□□□ 0.83
PCDHB2-202ENST00000622947 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.26■□□□□ 0.83
PCDHB2-202ENST00000622947 NUP58Q9BVL2 599 aa20.26■□□□□ 0.83
PCDHB2-202ENST00000622947 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.26■□□□□ 0.83
PCDHB2-202ENST00000622947 SYNGAP1Q96PV0 1343 aa20.26■□□□□ 0.83
PCDHB2-202ENST00000622947 PSAPP07602 524 aa20.26■□□□□ 0.83
PCDHB2-202ENST00000622947 ERVK-9P63128 1117 aa20.26■□□□□ 0.83
PCDHB2-202ENST00000622947 TMTC1Q8IUR5 882 aa20.26■□□□□ 0.83
PCDHB2-202ENST00000622947 ACRBPQ8NEB7 543 aa20.26■□□□□ 0.83
PCDHB2-202ENST00000622947 BORCS6Q96GS4 357 aa20.26■□□□□ 0.83
PCDHB2-202ENST00000622947 MMRN2Q9H8L6 949 aa20.26■□□□□ 0.83
PCDHB2-202ENST00000622947 TISP43B9A030 160 aa20.25■□□□□ 0.83
PCDHB2-202ENST00000622947 PLS3P13797 630 aa20.25■□□□□ 0.83
PCDHB2-202ENST00000622947 UBA1P22314 1058 aaKnown RBP20.25■□□□□ 0.83
PCDHB2-202ENST00000622947 ZBED6P86452 979 aa20.25■□□□□ 0.83
PCDHB2-202ENST00000622947 MEA1Q16626 185 aa20.25■□□□□ 0.83
PCDHB2-202ENST00000622947 CYP26C1Q6V0L0 522 aa20.25■□□□□ 0.83
PCDHB2-202ENST00000622947 CRACR2AQ9BSW2 395 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms