RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 RPLP2P05387 115 aaKnown RBP22.43■■□□□ 1.18
SSBP4-210ENST00000601444 RPA1P27694 616 aa22.43■■□□□ 1.18
SSBP4-210ENST00000601444 POTEGQ6S5H5 508 aa22.43■■□□□ 1.18
SSBP4-210ENST00000601444 OTUD6AQ7L8S5 288 aa22.43■■□□□ 1.18
SSBP4-210ENST00000601444 ERMNQ8TAM6 284 aa22.43■■□□□ 1.18
SSBP4-210ENST00000601444 SLC4A7Q9Y6M7 1214 aa22.43■■□□□ 1.18
SSBP4-210ENST00000601444 M0QZ92 97 aa22.42■■□□□ 1.18
SSBP4-210ENST00000601444 TMOD1P28289 359 aa22.42■■□□□ 1.18
SSBP4-210ENST00000601444 CCT6AP40227 531 aaKnown RBP22.42■■□□□ 1.18
SSBP4-210ENST00000601444 CEBPZQ03701 1054 aaKnown RBP22.42■■□□□ 1.18
SSBP4-210ENST00000601444 TMEM40Q8WWA1 233 aa22.42■■□□□ 1.18
SSBP4-210ENST00000601444 IFIH1Q9BYX4 1025 aaKnown RBP22.42■■□□□ 1.18
SSBP4-210ENST00000601444 ZSCAN16Q9H4T2 348 aaPredicted RBP22.42■■□□□ 1.18
SSBP4-210ENST00000601444 KDM3AQ9Y4C1 1321 aa22.41■■□□□ 1.18
SSBP4-210ENST00000601444 CD52P31358 61 aa22.41■■□□□ 1.18
SSBP4-210ENST00000601444 NLRP11P59045 1033 aaKnown RBP22.41■■□□□ 1.18
SSBP4-210ENST00000601444 GRIN1Q05586 938 aa22.41■■□□□ 1.18
SSBP4-210ENST00000601444 IKBKEQ14164 716 aa22.41■■□□□ 1.18
SSBP4-210ENST00000601444 PTPAQ15257 358 aa22.41■■□□□ 1.18
SSBP4-210ENST00000601444 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.41■■□□□ 1.18
SSBP4-210ENST00000601444 TMCO2Q7Z6W1 182 aaPredicted RBP22.41■■□□□ 1.18
SSBP4-210ENST00000601444 SNX29Q8TEQ0 813 aa22.41■■□□□ 1.18
SSBP4-210ENST00000601444 SEPT8Q92599 483 aa22.41■■□□□ 1.18
SSBP4-210ENST00000601444 MAP7D2Q96T17 732 aa22.41■■□□□ 1.18
SSBP4-210ENST00000601444 OSMRQ99650 979 aa22.41■■□□□ 1.18
SSBP4-210ENST00000601444 MMTAG2Q9BU76 263 aaKnown RBP22.41■■□□□ 1.18
SSBP4-210ENST00000601444 MTIF3Q9H2K0 278 aaKnown RBP22.41■■□□□ 1.18
SSBP4-210ENST00000601444 ADAMTS10Q9H324 1103 aa22.41■■□□□ 1.18
SSBP4-210ENST00000601444 DHX33Q9H6R0 707 aaKnown RBP22.41■■□□□ 1.18
SSBP4-210ENST00000601444 ANKEF1Q9NU02 776 aa22.41■■□□□ 1.18
SSBP4-210ENST00000601444 EVPLQ92817 2033 aa22.4■■□□□ 1.18
SSBP4-210ENST00000601444 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.4■■□□□ 1.18
SSBP4-210ENST00000601444 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.4■■□□□ 1.18
SSBP4-210ENST00000601444 BAIAP3O94812 1187 aa22.4■■□□□ 1.18
SSBP4-210ENST00000601444 ZSCAN22P10073 491 aaPredicted RBP22.4■■□□□ 1.18
SSBP4-210ENST00000601444 RARRES1P49788 294 aa22.4■■□□□ 1.18
SSBP4-210ENST00000601444 POLGP54098 1239 aaPredicted RBP22.4■■□□□ 1.18
SSBP4-210ENST00000601444 WDR5P61964 334 aaKnown RBP22.4■■□□□ 1.18
SSBP4-210ENST00000601444 DEFB103AP81534 67 aa22.4■■□□□ 1.18
SSBP4-210ENST00000601444 ARL6IP4Q66PJ3 421 aaKnown RBP22.4■■□□□ 1.18
SSBP4-210ENST00000601444 TSHZ1Q6ZSZ6 1077 aa22.4■■□□□ 1.18
SSBP4-210ENST00000601444 KSR1Q8IVT5 923 aa22.4■■□□□ 1.18
SSBP4-210ENST00000601444 TMEM143Q96AN5 459 aa22.4■■□□□ 1.18
SSBP4-210ENST00000601444 USP28Q96RU2 1077 aa22.4■■□□□ 1.18
SSBP4-210ENST00000601444 RAB34Q9BZG1 259 aa22.4■■□□□ 1.18
SSBP4-210ENST00000601444 SUCLA2Q9P2R7 463 aaPredicted RBP22.4■■□□□ 1.18
SSBP4-210ENST00000601444 NOC2LQ9Y3T9 749 aaKnown RBP22.4■■□□□ 1.18
SSBP4-210ENST00000601444 SZT2Q5T011 3432 aa22.39■■□□□ 1.18
SSBP4-210ENST00000601444 ABHD14A-ACY1A0A1B0GW23 586 aa22.39■■□□□ 1.17
SSBP4-210ENST00000601444 ATP2A2P16615 1042 aaKnown RBP22.39■■□□□ 1.17
SSBP4-210ENST00000601444 PBX2P40425 430 aa22.39■■□□□ 1.17
SSBP4-210ENST00000601444 GPC3P51654 580 aa22.39■■□□□ 1.17
SSBP4-210ENST00000601444 RABGGTBP53611 331 aa22.39■■□□□ 1.17
SSBP4-210ENST00000601444 FOXD4L6Q3SYB3 417 aaPredicted RBP22.39■■□□□ 1.17
SSBP4-210ENST00000601444 HAUS3Q68CZ6 603 aa22.39■■□□□ 1.17
SSBP4-210ENST00000601444 FOXD4L3Q6VB84 417 aaPredicted RBP22.39■■□□□ 1.17
SSBP4-210ENST00000601444 SLC7A3Q8WY07 619 aa22.39■■□□□ 1.17
SSBP4-210ENST00000601444 NACC1Q96RE7 527 aa22.39■■□□□ 1.17
SSBP4-210ENST00000601444 XPNPEP1Q9NQW7 623 aa22.39■■□□□ 1.17
SSBP4-210ENST00000601444 PADI3Q9ULW8 664 aa22.39■■□□□ 1.17
SSBP4-210ENST00000601444 KIAA1024Q9UPX6 916 aa22.39■■□□□ 1.17
SSBP4-210ENST00000601444 XRCC6P12956 609 aaKnown RBP eCLIP22.38■■□□□ 1.17
SSBP4-210ENST00000601444 MARCKSP29966 332 aaPredicted RBP22.38■■□□□ 1.17
SSBP4-210ENST00000601444 RFC5P40937 340 aa22.38■■□□□ 1.17
SSBP4-210ENST00000601444 DNM2P50570 870 aa22.38■■□□□ 1.17
SSBP4-210ENST00000601444 CRYBB1P53674 252 aaPredicted RBP22.38■■□□□ 1.17
SSBP4-210ENST00000601444 SMAD3P84022 425 aaKnown RBP22.38■■□□□ 1.17
SSBP4-210ENST00000601444 EMC2Q15006 297 aa22.38■■□□□ 1.17
SSBP4-210ENST00000601444 KRT79Q5XKE5 535 aa22.38■■□□□ 1.17
SSBP4-210ENST00000601444 RHPN2Q8IUC4 686 aa22.38■■□□□ 1.17
SSBP4-210ENST00000601444 DDX19AQ9NUU7 478 aaKnown RBP22.38■■□□□ 1.17
SSBP4-210ENST00000601444 TFIP11Q9UBB9 837 aaKnown RBP22.38■■□□□ 1.17
SSBP4-210ENST00000601444 PPME1Q9Y570 386 aa22.38■■□□□ 1.17
SSBP4-210ENST00000601444 SQORQ9Y6N5 450 aa22.38■■□□□ 1.17
SSBP4-210ENST00000601444 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.37■■□□□ 1.17
SSBP4-210ENST00000601444 CSDE1O75534 798 aaKnown RBP22.37■■□□□ 1.17
SSBP4-210ENST00000601444 BMP15O95972 392 aa22.37■■□□□ 1.17
SSBP4-210ENST00000601444 F13A1P00488 732 aa22.37■■□□□ 1.17
SSBP4-210ENST00000601444 KCNJ6P48051 423 aa22.37■■□□□ 1.17
SSBP4-210ENST00000601444 BECN1Q14457 450 aa22.37■■□□□ 1.17
SSBP4-210ENST00000601444 PRPF31Q8WWY3 499 aaKnown RBP22.37■■□□□ 1.17
SSBP4-210ENST00000601444 APBB2Q92870 758 aa22.37■■□□□ 1.17
SSBP4-210ENST00000601444 PBX4Q9BYU1 374 aa22.37■■□□□ 1.17
SSBP4-210ENST00000601444 DBR1Q9UK59 544 aaKnown RBP22.37■■□□□ 1.17
SSBP4-210ENST00000601444 E9PMD0 336 aa22.36■■□□□ 1.17
SSBP4-210ENST00000601444 RPS6KA5O75582 802 aa22.36■■□□□ 1.17
SSBP4-210ENST00000601444 MYOGP15173 224 aa22.36■■□□□ 1.17
SSBP4-210ENST00000601444 NFX1Q12986 1120 aaKnown RBP22.36■■□□□ 1.17
SSBP4-210ENST00000601444 PAK2Q13177 524 aa22.36■■□□□ 1.17
SSBP4-210ENST00000601444 ZRSR1Q15695 479 aaKnown RBP22.36■■□□□ 1.17
SSBP4-210ENST00000601444 KCNK18Q7Z418 384 aa22.36■■□□□ 1.17
SSBP4-210ENST00000601444 RTN4RL1Q86UN2 441 aaPredicted RBP22.36■■□□□ 1.17
SSBP4-210ENST00000601444 FAM228AQ86W67 206 aa22.36■■□□□ 1.17
SSBP4-210ENST00000601444 USP38Q8NB14 1042 aa22.36■■□□□ 1.17
SSBP4-210ENST00000601444 NLRP7Q8WX94 980 aa22.36■■□□□ 1.17
SSBP4-210ENST00000601444 CCDC43Q96MW1 224 aaKnown RBP22.36■■□□□ 1.17
SSBP4-210ENST00000601444 PNMA5Q96PV4 448 aa22.36■■□□□ 1.17
SSBP4-210ENST00000601444 PLIN2Q99541 437 aa22.36■■□□□ 1.17
SSBP4-210ENST00000601444 MTRQ99707 1265 aa22.36■■□□□ 1.17
SSBP4-210ENST00000601444 JPH2Q9BR39 696 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 322.9 ms